RNA id: XM_043248342.1



Basic Information


Item Value
RNA id XM_043248342.1
length 609
RNA type mRNA
GC content 0.56
exon number 4
gene id grb14
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 23943985 ~ 23960325 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATGAGTGCTATGAATGACTCCCTGGATGAGACGCGCAGCCTCGGGGAGAAAGCGGCCATATTTCGGGGAGCGAAAGGCAGCGGGAACGTCGTCGGCTCGGCCTTCATCCCGTTGCGCTCGCCCTTGCAGCCGCCCAACGCTGCGGTCTCCTCTCTCTTCAAGGGAAACAGGAAAAGTAGAGAGGTGGACGAAACACAAATGGGACATGTCCCGAATCCCTTCCCAGAGTTGCTGCCGTCCACTGTCTCTCTAGTGTCTGAGTGTCTGTTACCCTGGACCAAAAACAGTGCGACTCAGCTGCAGCACACTGCTCTGTTGTTTGGCTCTCTGGGACGGTCAAGGCCGCTGCGTCTGAGCAGTCGTAGCGCCTGCCTGTCTGCGCTACCACTGCCCACTGCTGATAAAGACCACGAGCCTCTCGCTCTCTCGGGTCACTTTGGACGAGAGGACGAAGGAATTCTGCTCCGATCTTAACAGCACGCGGAGCTTGTGTGGACACGAACAGAATCTGACTGCAGATTGGGCTTGATAAGTGAGAGTGGGATTAGaggaactgtgtgtgtgtgtgtgtcgggggGATGGTGTGAGAATACGTGTGTTTATTTGGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU107919 lncRNA downstream 30099 23912173 ~ 23913886 (-) True G72927
TU107908 lncRNA downstream 31949 23911453 ~ 23912036 (-) True G72923
TU107903 lncRNA downstream 309908 23558753 ~ 23634077 (-) True G72918
TU107885 lncRNA downstream 343093 23598987 ~ 23600892 (-) True G72904
TU107891 lncRNA downstream 403882 23537504 ~ 23540103 (-) True G72909
TU108005 lncRNA upstream 293269 24253362 ~ 24285690 (-) True G72980
TU108009 lncRNA upstream 321898 24281991 ~ 24284165 (-) True G72984
TU108125 lncRNA upstream 553001 24513094 ~ 24521308 (-) True G73077
TU108133 lncRNA upstream 604788 24564881 ~ 24571112 (-) True G73084
TU108266 lncRNA upstream 779233 24739326 ~ 24745938 (-) True G73160
XM_043249022.1 mRNA downstream 25333 23914681 ~ 23918652 (-) True LOC122351750
XM_043249021.1 mRNA downstream 226930 23716109 ~ 23717055 (-) True LOC122351749
XM_043249556.1 mRNA downstream 294425 23564379 ~ 23649560 (-) True LOC122352061
XM_043249534.1 mRNA downstream 517551 23419262 ~ 23426434 (-) True gjc4b
XM_043249535.1 mRNA downstream 517985 23419262 ~ 23426000 (-) False gjc4b
XM_043248989.1 mRNA upstream 21877 23981970 ~ 24029114 (-) False cobll1b
XM_043248987.1 mRNA upstream 21878 23981971 ~ 24029114 (-) True cobll1b
XM_043248988.1 mRNA upstream 21879 23981972 ~ 24029114 (-) False cobll1b
XM_043248991.1 mRNA upstream 21879 23981972 ~ 24010861 (-) False cobll1b
XM_043248990.1 mRNA upstream 21879 23981972 ~ 24010861 (-) False cobll1b
TU107929 other downstream 12656 23930207 ~ 23931329 (-) True G72930
TU107329 other downstream 1432678 22459396 ~ 22511307 (-) False LOC122351746
TU107316 other downstream 1636972 22299172 ~ 22307013 (-) False LOC122351746
XR_006251764.1 other downstream 1720318 22171463 ~ 22223667 (-) False cerkl
TU107092 other downstream 2217165 21709288 ~ 21726820 (-) True G72363
TU108001 other upstream 260429 24220522 ~ 24280708 (-) False G72978
TU108002 other upstream 271142 24231235 ~ 24280708 (-) False G72978
TU108000 other upstream 311362 24271455 ~ 24280708 (-) True G72978
TU108324 other upstream 1067492 25027585 ~ 25030965 (-) True G73201
TU108463 other upstream 1388685 25348778 ~ 25349640 (-) True G73301

Expression Profile