RNA id: TU108266


Basic Information

Item Value
RNA id TU108266
length 1052
lncRNA type inter_gene
GC content 0.37
exon number 2
gene id G73160
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 24739326 ~ 24745938 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gagagagagagagagtcttgTGTATAAAGGTTTTGTGTATATTCTGTCCTGCATCATGTGGAAATTATTTGACTGCAAAAGAAATTGTACATACTGTCCTAACAACAGGACTGATTTcttgttataatttttaaagaacTCATTTAGTTAGAACTCATTCAATGAATGACAATAACTCTTGTTGAATTCTTCCACCTACCCAGCGATGTGACGTGGACCTGACTGTAGGGTTGTTTAGAAGCGGTGCAGGCCTTCAGCACTCTGCCCATGGACTCCCCCAGCAGGATCCACTGATGAGAGTCAGGAGAGAAAGAACTCACCAACACCTGAGCATTCACCTGAGGACGGAAACAAAGAGCGATCTTCAGCATCGTGACATGCCTCCGAGTGAAACGGACTAGAGAAAAGAATACAGGGCAGGGtctcatgttttatatattggCCGGATGGAGGTTGGCTGAACGAGACCTTAGAGCCAGACTAAATGACTGGAGTCCGGTACACGTCATCAGaaggaaatatgcatttttcacCTTATGATCAATGTGCATTTGCAAAACAGAGtgagttttcatttcattttactttctcATGCCccaatttaatagtttttgtaaacGTTTCACACCAAATCAGCATCAAAGGCTATATTTATGTCAAACAATAAGATTTAAATAGTCCAAATACTTCAATGAACTGTataagttaatttAACaatgatattaatatatttaacaatactattttttcccctcaaaagACACTTTTGTTTGATTTGAACTACTTTCTGAATCAAAACAGTTCCCGGTTTAACAGATGCACCTTTTTGGGGAGCTGTATTGCGCTGACATATACATATAGGTTCTATGAGTTTTCCTgatgtttccatgtttttttcttcctctgacTGTGGGAACCTGTTTCTGGAATTTTCTTTgggtttttataaaaacagttttgcacGAATATctgtggtgaaaaaaaaaatacttttatgttTGTCCTAAAAATAAATCTCCATTATTTACAGCCATTTCTGTATTCTgtattag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU108133 lncRNA downstream 168214 24564881 ~ 24571112 (-) True G73084
TU108125 lncRNA downstream 218018 24513094 ~ 24521308 (-) True G73077
TU108005 lncRNA downstream 453636 24253362 ~ 24285690 (-) True G72980
TU108009 lncRNA downstream 455161 24281991 ~ 24284165 (-) True G72984
TU107925 lncRNA downstream 758088 23926223 ~ 23981238 (-) False G72929
TU108285 lncRNA upstream 30222 24776160 ~ 24778655 (-) True G73175
TU108295 lncRNA upstream 55100 24801038 ~ 24801377 (-) True G73179
XR_006251791.1 lncRNA upstream 66378 24812316 ~ 24820878 (-) True LOC122351686
TU108298 lncRNA upstream 66378 24812316 ~ 24821062 (-) False LOC122351686
TU108303 lncRNA upstream 93668 24839606 ~ 24839961 (-) True G73186
XM_043248298.1 mRNA downstream 5544 24728368 ~ 24733782 (-) True ccdc173
XM_043249293.1 mRNA downstream 11596 24717610 ~ 24727730 (-) True fastkd1
XM_043248836.1 mRNA downstream 72159 24571862 ~ 24667167 (-) True lrp2a
XM_043249351.1 mRNA downstream 180583 24533877 ~ 24558743 (-) False abcb11a
XM_043249350.1 mRNA downstream 180583 24533877 ~ 24558743 (-) True abcb11a
XM_043249729.1 mRNA upstream 8950 24754888 ~ 24758657 (-) True mettl5
XM_043248413.1 mRNA upstream 15603 24761541 ~ 24764855 (-) True cxcr2
XM_043248760.1 mRNA upstream 22347 24768285 ~ 24772259 (-) True LOC122351585
XM_043248763.1 mRNA upstream 38965 24784903 ~ 24786237 (-) True LOC122351587
XM_043249720.1 mRNA upstream 43568 24789506 ~ 24797054 (-) True zgc:92380
TU108001 other downstream 458618 24220522 ~ 24280708 (-) False G72978
TU108002 other downstream 458618 24231235 ~ 24280708 (-) False G72978
TU108000 other downstream 458618 24271455 ~ 24280708 (-) True G72978
TU107931 other downstream 779001 23956219 ~ 23960325 (-) False grb14
TU107929 other downstream 807997 23930207 ~ 23931329 (-) True G72930
TU108324 other upstream 281647 25027585 ~ 25030965 (-) True G73201
TU108463 other upstream 602840 25348778 ~ 25349640 (-) True G73301
TU108462 other upstream 710476 25456414 ~ 25458742 (-) True G73300
TU108524 other upstream 1044579 25790517 ~ 25793056 (-) True G73347
TU108525 other upstream 1048145 25794083 ~ 25832356 (-) False LOC122351758

Expression Profile