RNA id: TU108464



Basic Information


Item Value
RNA id TU108464
length 244
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G73302
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 25351063 ~ 25389815 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


taaaggtacaaaaaggcaggcaggtagaacaggcaggcaggataaacacacgtaaagacatcaggtaaggacctcggcgctcggaccaacagaactgaaaacacaggacttaaatacacgtggtaattgactaaattaatacgacacagctgatgacaataacataattaacacagagggaaggcagggcacagggagcacatggcatgaaacgaaaacataaacacagaagtccagagtcgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251708.1 lncRNA downstream 256264 25092636 ~ 25094799 (-) True LOC122351187
TU108303 lncRNA downstream 511102 24839606 ~ 24839961 (-) True G73186
TU108298 lncRNA downstream 530001 24812316 ~ 24821062 (-) False LOC122351686
XR_006251791.1 lncRNA downstream 530185 24812316 ~ 24820878 (-) True LOC122351686
TU108295 lncRNA downstream 549686 24801038 ~ 24801377 (-) True G73179
TU108467 lncRNA upstream 82451 25472266 ~ 25476172 (-) False G73305
TU108468 lncRNA upstream 82451 25472266 ~ 25476938 (-) True G73305
XR_006251714.1 lncRNA upstream 354206 25744021 ~ 25750389 (-) True LOC122351247
TU108533 lncRNA upstream 444502 25834317 ~ 25846796 (-) True G73350
TU108534 lncRNA upstream 470513 25860328 ~ 25862412 (-) True G73351
XM_043248249.1 mRNA downstream 543282 24803623 ~ 24807781 (-) True gpbar1
XM_043249720.1 mRNA downstream 554009 24789506 ~ 24797054 (-) True zgc:92380
XM_043248763.1 mRNA downstream 564826 24784903 ~ 24786237 (-) True LOC122351587
XM_043248760.1 mRNA downstream 578804 24768285 ~ 24772259 (-) True LOC122351585
XM_043248413.1 mRNA downstream 586208 24761541 ~ 24764855 (-) True cxcr2
XM_043249181.1 mRNA upstream 70080 25459895 ~ 25462849 (-) True LOC122351834
XM_043249028.1 mRNA upstream 441163 25830978 ~ 25853303 (-) True LOC122351758
XM_043249521.1 mRNA upstream 472938 25862753 ~ 25919696 (-) True LOC122352035
XM_043249390.1 mRNA upstream 675397 26065212 ~ 26067013 (-) True gcgb
XM_043248248.1 mRNA upstream 678423 26068238 ~ 26080787 (-) True LOC122351282
TU108463 other downstream 1423 25348778 ~ 25349640 (-) True G73301
TU108324 other downstream 320098 25027585 ~ 25030965 (-) True G73201
TU108001 other downstream 1070355 24220522 ~ 24280708 (-) False G72978
TU108002 other downstream 1070355 24231235 ~ 24280708 (-) False G72978
TU108000 other downstream 1070355 24271455 ~ 24280708 (-) True G72978
TU108462 other upstream 66599 25456414 ~ 25458742 (-) True G73300
TU108524 other upstream 400702 25790517 ~ 25793056 (-) True G73347
TU108525 other upstream 404268 25794083 ~ 25832356 (-) False LOC122351758
TU108526 other upstream 404268 25794083 ~ 25819211 (-) False LOC122351758
TU108498 other upstream 458002 25847817 ~ 25853294 (-) False LOC122351758

Expression Profile