RNA id: TU108498



Basic Information


Item Value
RNA id TU108498
length 724
RNA type TUCP
GC content 0.55
exon number 6
gene id LOC122351758
representative False

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 25794083 ~ 25853303 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGTTCGGGCGCGCGCACCCGCGATCCCTGCGATGTGTTGAAAACATGGACTCCGCTTCTCGTCGTCTTACGCTCTTTTGCGTCGCTTTTCTGACTTTCGCGTGCCGCCCGGCGCCGGGAGAGGACACCGCCGACTGTCCTGCAGATGGCCGCACGTGGTTGCCGTTCAACTTCAACTGCTACCACTTCGTCCACGGAGAAGAGGACGTGGCCAAAAGCTACTTCGTTCAAGACGCGAAAGACGCGTGCCGAGGATATGATCTCCTGACTGTGAAAAGTGCAGAGGAGAACGACTTCATCGTGAAGTACAGCCCTTCTGTGTGGAAAGGGAGGATGAGCGTCTGGCTCGGAGCGTACTACGACAGCGACGACGATGTCTTTAGGTGGCAGGATGATAACAGCGTGCTGGGATACAGTAACTGGGAGGACGGCGCCTCCGATGAGACTGATCTGGTTCTGCTGGACACGTGTGTTGTTCTGCACACTGACTCGGGGAAGTGGGAAAACATCAGCTGCTCCGCTGAACCCGAGAATGGAGTCGTGTGTAAGACCAAGGCAGTCTGGATAAACCCCCCAAAAGGCAGTCCTCTTCTGTCAGCTCTGGTCATCATCAGTGTGGTCCTGATTCTGGTGGTTTCTGCAGTGATTTGGTTCTTCCATCAAAGAAACAGCCCAGGCTCATCTATCCTGAACCTGATCGAGTATCATCCTCCCTTCAGATCCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU108533 lncRNA downstream 1021 25834317 ~ 25846796 (-) True G73350
XR_006251714.1 lncRNA downstream 97428 25744021 ~ 25750389 (-) True LOC122351247
TU108468 lncRNA downstream 370879 25472266 ~ 25476938 (-) True G73305
TU108467 lncRNA downstream 371645 25472266 ~ 25476172 (-) False G73305
TU108464 lncRNA downstream 458002 25351063 ~ 25389815 (-) True G73302
TU108534 lncRNA upstream 7034 25860328 ~ 25862412 (-) True G73351
TU108535 lncRNA upstream 7034 25860328 ~ 25862274 (-) False G73351
TU108474 lncRNA upstream 92107 25945401 ~ 25965894 (-) True G73308
TU108574 lncRNA upstream 190870 26044164 ~ 26045413 (-) True G73379
TU108588 lncRNA upstream 201573 26054867 ~ 26062832 (-) True G73385
XM_043249181.1 mRNA downstream 384968 25459895 ~ 25462849 (-) True LOC122351834
XM_043248249.1 mRNA downstream 1040036 24803623 ~ 24807781 (-) True gpbar1
XM_043249720.1 mRNA downstream 1050763 24789506 ~ 24797054 (-) True zgc:92380
XM_043248763.1 mRNA downstream 1061580 24784903 ~ 24786237 (-) True LOC122351587
XM_043248760.1 mRNA downstream 1075558 24768285 ~ 24772259 (-) True LOC122351585
XM_043249521.1 mRNA upstream 9459 25862753 ~ 25919696 (-) True LOC122352035
XM_043249390.1 mRNA upstream 211918 26065212 ~ 26067013 (-) True gcgb
XM_043248248.1 mRNA upstream 214944 26068238 ~ 26080787 (-) True LOC122351282
XM_043248740.1 mRNA upstream 228854 26082148 ~ 26104816 (-) False ifih1
XM_043248739.1 mRNA upstream 228854 26082148 ~ 26104816 (-) True ifih1
TU108525 other downstream 15461 25794083 ~ 25832356 (-) False LOC122351758
TU108526 other downstream 28606 25794083 ~ 25819211 (-) False LOC122351758
TU108524 other downstream 54761 25790517 ~ 25793056 (-) True G73347
TU108462 other downstream 389075 25456414 ~ 25458742 (-) True G73300
TU108463 other downstream 498177 25348778 ~ 25349640 (-) True G73301

Expression Profile