RNA id: TU108524



Basic Information


Item Value
RNA id TU108524
length 933
RNA type TUCP
GC content 0.56
exon number 3
gene id G73347
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 25790517 ~ 25793056 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGGAAGAGCAGTCACACTGTAGGGCAGGATAAACTGGACGTCCAGGGTCTGCTTTTGTCCCAGCTGCCATTGCACATCCAGTCCTTCAGATCTAAAGAGGAGCCCGGTAAACACGCCAGCGTCATCCAGACCACAGGCCTAGCATCCAGCACAAAACCACTAGCACTCGTCACGCAGCGACGCCGAGACAGAGACGTACCGTCCCCTACAGACGTCTCCCACTCATCCTCACCAAAAGCAGCTCCCCTGACCCCGTCACCCAGGTCTCCCACACCGCCCTGCTCCAAATCcactcctctgccgtcagaccGTCTGAAGACGTGCAAGAATTACCTCGACGAGACCCTGCTCACCATCAACAACTTCAGCAAACAGTCATCTCTACCTCAGGCCTATCCTGCACAGGAGCCACGGAGCAGCCAGAAACCTCCGTTCCTCCACTCACTTCCCACTGTGCAGGACGCTCCTCTGGCCCTCATCACTAAACCTCGCTCCCAGAGCACTCCGCTGGCCGCCACCAGCCCCGCGGTCAGCGCTCCCATCAACCTCAGCACCACGGAAGGGAAGGCCCGGAGGACGCTGAAGAGAGAGACGCCGTCATTGGCGGAGCACTTCAGGGGGGCGGAGTCTGGGCTCCCTGACAGTAAAGACTCTGAGGACTCGTTAATGGAGGACGAGGATGAAAATGACGCTTCAAATGACAGCCTCTCAGACTCTGACAGCAATTTAGACACTgattctgatgatgatgatggtaaaGATGAAGAGATGGACACAGATTCAGAAATGGACAGAACGCCACTCAAACTCACCAAATCCTCAGCGTCTATACTTGACTCCTCCCACAGCACTAGCCCCACCCCTCTCAATCTACAAGTTCATAAAACGCCTGCCACAACCACGAACAACTCCGGGaattcggccaatcacagc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251714.1 lncRNA downstream 40128 25744021 ~ 25750389 (-) True LOC122351247
TU108468 lncRNA downstream 313579 25472266 ~ 25476938 (-) True G73305
TU108467 lncRNA downstream 314345 25472266 ~ 25476172 (-) False G73305
TU108464 lncRNA downstream 400702 25351063 ~ 25389815 (-) True G73302
XR_006251708.1 lncRNA downstream 695718 25092636 ~ 25094799 (-) True LOC122351187
TU108533 lncRNA upstream 41261 25834317 ~ 25846796 (-) True G73350
TU108534 lncRNA upstream 67272 25860328 ~ 25862412 (-) True G73351
TU108535 lncRNA upstream 67272 25860328 ~ 25862274 (-) False G73351
TU108474 lncRNA upstream 152345 25945401 ~ 25965894 (-) True G73308
TU108574 lncRNA upstream 251108 26044164 ~ 26045413 (-) True G73379
XM_043249181.1 mRNA downstream 327668 25459895 ~ 25462849 (-) True LOC122351834
XM_043248249.1 mRNA downstream 982736 24803623 ~ 24807781 (-) True gpbar1
XM_043249720.1 mRNA downstream 993463 24789506 ~ 24797054 (-) True zgc:92380
XM_043248763.1 mRNA downstream 1004280 24784903 ~ 24786237 (-) True LOC122351587
XM_043248760.1 mRNA downstream 1018258 24768285 ~ 24772259 (-) True LOC122351585
XM_043249028.1 mRNA upstream 37922 25830978 ~ 25853303 (-) True LOC122351758
XM_043249521.1 mRNA upstream 69697 25862753 ~ 25919696 (-) True LOC122352035
XM_043249390.1 mRNA upstream 272156 26065212 ~ 26067013 (-) True gcgb
XM_043248248.1 mRNA upstream 275182 26068238 ~ 26080787 (-) True LOC122351282
XM_043248740.1 mRNA upstream 289092 26082148 ~ 26104816 (-) False ifih1
TU108462 other downstream 331775 25456414 ~ 25458742 (-) True G73300
TU108463 other downstream 440877 25348778 ~ 25349640 (-) True G73301
TU108324 other downstream 759552 25027585 ~ 25030965 (-) True G73201
TU108001 other downstream 1509809 24220522 ~ 24280708 (-) False G72978
TU108525 other upstream 1027 25794083 ~ 25832356 (-) False LOC122351758
TU108526 other upstream 1027 25794083 ~ 25819211 (-) False LOC122351758
TU108498 other upstream 54761 25847817 ~ 25853294 (-) False LOC122351758

Expression Profile