RNA id: TU108535


Basic Information

Item Value
RNA id TU108535
length 1796
lncRNA type inter_gene
GC content 0.35
exon number 2
gene id G73351
representative False

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 25860328 ~ 25862412 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ctcaaAAATCTAGTTTATTAAGGCTTTATTGGTTAATTTGTCTTCCAAAAGACTGTGTTTTTGACCTGGTGGGTCTTGTTGACCGGTTATCTACCTCAGAGTTTTGTTGTCCTCTGTTTTGATTGGTCGGGCAGCAGGTTCAGCCCGCCCCTCCAGACCAAACGGCCAGCTCAGGAGCGGCCCACGTACACTTGATttctttcaggttttttttgtttttaagtactttaatcctcttcttcttcttcttctccttcaaacggaatttttttgttttgttttatgattctTCTTATCGTTATAAGGAAAGTTGTGCGTTGAACGTGTCGTTTTAGTGTCGTATAGCATTCAGATTCATCGTTTcgaaagcaaaaaacaaaaactgctgCTTTTCATCACAAGATATTCCAGTAGTCCATAGGAAGTAGACAAGGAAGTGCGCGCGAGAGAGAGACGGAGCCAATGAGAAACAGCGATTCTGAGAGTTTTCCCGAGACGTCACTGTTGTGTGGAAGCTTCTTTCTGTCACcgaataaatttttattataaattttttttaaaaataaaaatcattgcGACTTTTTCTCTCACAATGCAGACTTTTTTCCCTtcactaattttttttttcttaatttgaattttgattCTCAAGTTTATACGGCGAGTTAACAATTtctaattctgactttttactTAGAATTttgagttaaattaaaaacctcacaattcttGTTTAATTCTTGTAATTCAATTTTTTtgggatttctttttttggaattttgagttaaattaaaaacctCACAATTCTTGTTTAATTCTtctaattcaaattttttttagaatcttTTTTTGGAATTTCGAGTTTGTCTTGCAGTTCTTTTTCCCCCCCATCACAAAATAAAGACCggtttttactttatatatcttttttttttttttttacccagatTTGTGATTTCTATACCGTCTCCAtcatggaataaaaaaaatacaatgggtaaatgcaactttttatcgaccttttttttcacagaattgcaagtttatattcTGTAACTGCAAGTCAACATCACATGATTCTGGCTTTTTGCTCAGAAAAAGCTATTGTAAATGTAGAGCTTGCACGATGCAAACTCACaataatttagaaatgacaagaattttttttttttttttatcccgtGTAGGAAAGCAGCTTCCATACTGTTACTTTCAGAGCGAGTCCAGACAGACTTTAATCCGTGGTGCTCCGCTCACAGCCGAGTCCATTCTTGACGTGcatgctggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctgtggagTTCTTGTGTGGCTCATGCTGCTAGTAACATCCGAATCCGAAGTGCCAATCTGTGTCTGGGTCAAAGAGTTGGAAAGACTTGTTGTGCAGAGAGAAATTGCTCATGAATATGAAAAATCATGTACTAGACAGCCATTAAgttatatgaaaaaaagtaataatttatgAAGAGAGACGTTTTGTACAGActgtttgaaaaaagaaaaccaataaAAAGATTTTCATAGAGATGTCTATATGAGagttgattttgttttacaCGTGCCACGCTCTTGCCGGTGGTATCCTGTATGTTCGCTTTATCAGAAACCTTCCtctgtatttgtttctttttgtttcctgAGTGTTTGTTTAAgccaaaaaaagctttttttccctccctgtTCCCCTTTGTTTCCAGTAGATTGTTAATTAAGctttatttctgttcatttctttgaaaactttggaataaaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU108533 lncRNA downstream 13532 25834317 ~ 25846796 (-) True G73350
XR_006251714.1 lncRNA downstream 109939 25744021 ~ 25750389 (-) True LOC122351247
TU108468 lncRNA downstream 383390 25472266 ~ 25476938 (-) True G73305
TU108467 lncRNA downstream 384156 25472266 ~ 25476172 (-) False G73305
TU108464 lncRNA downstream 470513 25351063 ~ 25389815 (-) True G73302
TU108474 lncRNA upstream 83127 25945401 ~ 25965894 (-) True G73308
TU108574 lncRNA upstream 181890 26044164 ~ 26045413 (-) True G73379
TU108588 lncRNA upstream 192593 26054867 ~ 26062832 (-) True G73385
TU108585 lncRNA upstream 194217 26056491 ~ 26061118 (-) False G73385
TU108631 lncRNA upstream 244621 26106895 ~ 26107406 (-) False LOC122351579
XM_043249028.1 mRNA downstream 7025 25830978 ~ 25853303 (-) True LOC122351758
XM_043249181.1 mRNA downstream 397479 25459895 ~ 25462849 (-) True LOC122351834
XM_043248249.1 mRNA downstream 1052547 24803623 ~ 24807781 (-) True gpbar1
XM_043249720.1 mRNA downstream 1063274 24789506 ~ 24797054 (-) True zgc:92380
XM_043248763.1 mRNA downstream 1074091 24784903 ~ 24786237 (-) True LOC122351587
XM_043249521.1 mRNA upstream 479 25862753 ~ 25919696 (-) True LOC122352035
XM_043249390.1 mRNA upstream 202938 26065212 ~ 26067013 (-) True gcgb
XM_043248248.1 mRNA upstream 205964 26068238 ~ 26080787 (-) True LOC122351282
XM_043248740.1 mRNA upstream 219874 26082148 ~ 26104816 (-) False ifih1
XM_043248739.1 mRNA upstream 219874 26082148 ~ 26104816 (-) True ifih1
TU108498 other downstream 7034 25847817 ~ 25853294 (-) False LOC122351758
TU108525 other downstream 27972 25794083 ~ 25832356 (-) False LOC122351758
TU108526 other downstream 41117 25794083 ~ 25819211 (-) False LOC122351758
TU108524 other downstream 67272 25790517 ~ 25793056 (-) True G73347
TU108462 other downstream 401586 25456414 ~ 25458742 (-) True G73300

Expression Profile