RNA id: XM_043248741.1


Basic Information

Item Value
RNA id XM_043248741.1
length 7708
RNA type mRNA
GC content 0.46
exon number 16
gene id LOC122351579
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 26106657 ~ 26187631 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACGCGCTACTCTGCTACACTACAAAGCGTCACAGAAGCACGCAATTTGGGACGCGCCTATTGTGTCGCCTACTTACATTAGTTTGATAGATCCACGCCTCtgccgttgttgttttttttttttacacttcaaAGTCATGAGCGCGATAACTCAACCCCCTTTACGTATCATCGACGAAACGAGCGCCGCTGAGGCTGACTGCGCGCTGGGGTGAGTTTAGTGTCAGCCCTGGGCGGCGGAGCTCAGTCAAAGCCCCTAGAGGCGGATCGCAACACAGCCTTCCGTTCAGCTTTCAGCACCACGCAGGACTTCACCCGTCTGCGGACAGCGATGCTCCCGCGCCCGACTCTCGCCCGACTCTTCCTCATCACCGATTCCCGTCGGTGTCGGTTTCGAGGAGTTCAGCCAAGGTTCCGACACGCGTGTGACTACAACCGACGCATCTGAGTTCACGCCGACAAAAGCGCCCTGAAAGTGGAGAGATCGGACAAAGAGCCGCCGTTCAGATGCAGCGATAACTTTGAGGAGGTTTTTTTGCGGACGAACGCCTGAAGATTGTCACAATCATGCCTGTACGGAGAGGTCATGTCGCTCCACAGAATACCTTTCTTGGAATAATAATACGGAAATTCGAGGGGCAGAATAAGAAGTTCATCATAGCCAATGCCCGGGTCCAGAACTGCGCTATTATTTACTGCAACGACGCATTCTGCGAGATGACAGGGTTCTCACGGCCAGATATCATGCAGAAACCTTGCACATGCGACTTCCTGCACGGCGAGCAAACCAAGAGACACGCGATTGCGCAGGTGGCCCAGGCTCTCCTGGGGTCGGAGGAACGGAAAGTGGAGATTACGTACCATCGCAAGGACGGCTCAGACTTCCAGTGCAACACTCACATCATCCCAGTGAAGAACGAGGAAGGAGTCGTGATGATGTTCATCTTGAACTTCGATTACGTTCTAGACGAGGAGAGCAGCGACTCCATGGAGAGACTCAACCTCACGCCGCCTGCCAAATCTGAAATCCGAAAAGGACGATTCTTCCGCTTCCGTCTGCCGGCCTTGACCCTGCTGGGCACCAGCAAGCAGTCTCTCCCTCAGGACGACCCGGACTCGGTGATGGTGGACTCTCCCCGGGTCAGTGACGACTCTGCGGCTGTGATGGACGTCCGATCGCCGGCCAAGGACGCCTCGAGTCCGGCGGATGCCAACGACACGCGGGCGCTCATCAGCTCCAGCCCTCACTCGTCACCCCTCGACCACTCGTCACCCAAACAGCCCTGGGACCGGCCCAGTCCGTCTCAAGCGCAGTCCAGCACCTTCCTGGCCCAGTCCCTGTCCAGAGACAGCATGAGCAGCAGGAGACGGGCCTCCTCCGTTCACGACATCGAAGGGCTGAGCGCCAACTCCAAACGCCTGTTTACTGACAGACACGCGAGCGAAGGTCCGTTCAACCACCTGAAGTCCAGTCTGCTGGGATCCACCTCAGACTCCAATCTGAACAAATACAGCACCATCAACAAGATCCCGCTCATCGCGCTCAACTTCTCTGAAGCCAACGATAAGAAAGCGCCTTCCCCTCCGTCCTCGGAGAAAACCATCATCGCGCCGAAGGTCAAGGACAGGACACACAACGTCACGGAGAAGGTCACACAGGTGTTGTCGCTGGGCGCCGACGTGCTTCCAGAATACATGCTCCAGACGCCGCGCATGGATAAGTTCACCATCCTGCACTACAGCCCGTTCAAAGCGGTGTGGGACTGGCTCATCCTGCTGCTGGTGATTTACACCGCCATCCTCACCCCGTACTCCGCCGCCTTCCTGCTCAACGACAGCGAGGAGCAAAAACGGCGGGAATGTGGCTATTCCTGCAGCCCCCTCAATGTCGTGGACCTAATGGTGGACATCATGTTCATCATCGACATCCTCATTAACTTTCGCACCACCTACGTCAACTTGAACGAGGAGGTGGTGAGCCATCCGGGGAAGATCGCCATCCATTACTTCAAGGGCTGGTTCCTTATAGACATGGTGGCGGCCATTCCCTTCGACCTGCTCATATTTGGATCAGGATCAGATGATACGACGACTCTGATTGGCCTGTTGAAGACGGCTCGGCTCCTCCGGCTGGTTCGCGTCGCCAGGAAGTTGGACCGTTACTCTGAATACGGCGCGGCGGTCCTCATGCTGCTCATGTGTATATTCGCTCTGATCGCCCATTGGCTGGCCTGCATCTGGTACGCCATCGGAAACGTGGAGAAACCGTACCTGGAGCATAAGATCGGCTGGCTGGACAATCTCGAGGTGTCTCTCGGGAAGAGATGCAACTCAACTGAGCACTGCTCTGGGCCGAGCATCAAGGACAAATACGTGACGGCGCTGTACTTCACCTTCAGCTCGCTGACCAGCGTGGGCTTCGGGAACGTGTCTCCGAACACCAACTCGGAGAAGATCTTCTCCATCTGCGTCATGCTCATCGGATCTTTGATGTACGCCAGCATTTTTGGGAACGTTTCGGCCATCATCCAGCGGCTGTATTCAGGAACGGCGAGGTACCACATGCAGATGCTCCGCGTGAAAGAGTTCATCCGATTCCATCAGATCCCCAACCCTCTCAGACAGAGACTGGAGGAGTACTTCCAGCACTCCTGGACCTACACCAACGGCATCGACATGAACATGGAGGTCTTAAAAGGCTTTCCTGAGTGTTTACAGGCAGATATTTGTCTCCATCTGAACCGCAGTCTCCTTCAGGGATGTAAGGCTTTCAGAGGTGCTACTCAAGGATGTCTGCGCGCTCTCGCCATACGCTTCAAAACCACCCATGCCCCTCCTGGAGACACGCTGGTGCACTGCGGGGACGTCCTCACCGCGCTCTACTTCCTGTCTCGAGGATCCATCGAGATCCTCAAGGACGATATCGTGGTGGCCATTCTGGGTAAGAATGACATATTCGGGGAGATGATTCACCTGTACGCCAAGCCGGGAAAGTCGAACGCAGACGTGCGAGCGCTCAGCTACTGTGACCTGCACACCATCCAGAGAGAGGAGCTCCTGGAGGTCCTGGACATGTATCCAGAGTTCGCCGACTACTTCCTGACCAACCTGGAGCTGACCTTTAACCTGCGGGATGACAACTCAAAGGCCACGTTTTCACAAGCCAGCGATTCAGACGGAGAGGAGACCAAGAGCCGAAGGAAGATCTCCTTCAAACGCAAACCATCCAAAGGAGGAAGCGTGAAGGAAACAGACAGCGAGTGCAGGAAGGAGCGGCGAGAGTCTCGTCTCAGCTCTAAGAGAAGTTCAGAGGACCGTCACACCTCCAGAGAGGAACAGCAAAGGCTTCTGGGAGCAGGAATAACAGAGTGCCCGTCCGTTCAGAGCTACACCTCCACGCCGAGCTGCAGTCCTCCTGCTGAGCACACAGAGAAGACGTATGATGAGATGCAGACTGACGGATGGCCAGCCGAGCGAGTGAAAGCAGACGTGGACACGGCTGCGCAGGAGCAGGGCGCCGCTGAAGAGGAGGATCTGGACTGTGACGTCACGTATGGAGAAGTGGAGCAGAGACTAGACCAGCTGCAGGAACACCTGAGCAGGTTAGAGTGTCAGATGACGTCAGACATTCAGAGCATCCTGCAGCTGCTGCAGAGACAGACGTGTTTAGGACCTCCGGCCTACAGCAGCCTCACATCGGGCCCCGAGTACAAGAGACCCGCCATCAGAGTACAACCAGTCGCTTCCCTGCCCACCGACCcacagCATGCTGACCTTTTGTCCACGACAAAGATCCATGCGAACCCCAAAGACTCTCTGTCAGCTCTGGCCCTTACGGACTCCAGGCCGAAGCCGAGCCACGGGACACGCTCTTCCCAGGACTCCAGCTCCACGTACCGCTTCACGAACAGCCAGACTCTTCCTCTGACGCGCCAGCAGTCCAGATCCCAGCTCCACAGACCGCCCTCTGACCCAGGGCTGCACTGACCGGGACGTCCCACAGCTCTTACACACCTCCTTGgaggcagaagaagaaaaaaaacaggcatcGGCCAAATCTTATGATATTAATGCAGCTTAAGACTCACCGCCGGCTCTTGCCTGTACATTTGCTTCCTCTCGCTTCTACGCTCCTCGATGCCGTCGAGGACGATCTGGAACGGATTCCCGGACAACACTTCCGTTTTCAGGAAGTCAAAGACATTTCTTGGAGCGtcttggacactttcccacaTACATGTGTTCTGCACACTTTCACACTGGCGTGAGACTCAGGACATGGATGAATCTCGTCCCCTGTTTTATCATTACCGTTCTAAATTATAACGATGACATTTTTACACTTCCATTTGCAGAACCCTGCGGTACGGTGTGGtccatttttattcaatttctttgcatttaaagcattttttttacaacatttgtACGTCATACAaaattttttaagcaaattttcaaaataaaacattaatttgacaaaaatcaaattttaaattaatgacaaaaacgTCAAACTCCCCacaaatagtaaataaatgttgatttttattcattaagttCATTTTATATCCATGCTTCATATGTAAAGTGCTTTGAGTTATGGACCCCacttgtaaaaattattatttttattgtttagatttttttttttttttttttttttttacattttattaaatgaatgcagatttaattaaaatatttaatccattaaatttttatttatatttatttttttcattgtctaATTTAGTAAAAGTTTCACtggaatgacttttttttttttttacaaaaagttaaTTTGAATTCGAAAAACGTTAACTTGCCAACTTTCGTCAAAATTCATTAATTCGTTAATTAATCATAAAATCTCTCTCAGTTTTGGATCTCGCTATTGCAAGTACCGGTTCGTTGGCGTTTGTTTTAATTCGGTTTCATTTGTGGAATCGCACTTAGCTGCCATGTACATACATGATACCCCTCTATTAAACGAAAAGGCATGCATGGCTGAAGGTTTTTACGTGTTGCATGTGTACTGCAACGTGTTGGGAAGCGGGTTTTCTGTATGTCGGCATGTTTCAGAGCTAATCACTGAATGCACTCCTCTCTGATTGACTGGGTTTATTTGCACACGGTCATGCTAGCTTGAACCAAACCCTGCACGACATGAAACAACGACACCGAGCAGCTCCTTTGCAAGCACTGGCGTATAAGACAGCCTcatgtgtagtaataataataataacaatatggAATACAAACAAATGTGAGAAGTAATGAATCATAGACACTGATGCACAGAAAATATCGATCGTTCATGTTTCCCGATTTTTGTCACACGCCACTGTTTGCAAAGCACACGTTAGTCTCTTATGTAGCTACAGTAcgaatatatatgcataataaaatatttaacttctggtgagaaaaaaaatgttggctTCGTTCGGAATCTTCTTGCAACAAAATCACTTTGTTTTCCAAATATATTTAGCGTAGAGAAGCTTCTGTGGCACATCCTGCTagcaataatgataaaacaccGGATCTTCGCTCTCATGTTTCTCGTCTAAAAGTCGATTTGCTGATTTGCGTTGAAAAGATTGTAACACTCACTGCCTAACATCATCTGAGGGGATGTTTTTGcacctcttttttttgttctgcaatATTAGTAcctaaaaaatgtacatttatacccaataaactggatttttttttttttttacgtgcatTAAACTCTTTCGCGAATTACTTTGTCGATATGTCGCAGCTCGGCTTCCAAGCTGCAGCTttgatttggtttatttttgtacGTCACTGCGAAGCGCTGCGTTTGGGATCACGGGGGAGGGGGGGGGAAGTAAATTGCACAGGAGCGTCGTCGCACGCAAGCGAATATCAGATCCGCCGATGAATGCAATAAATTTGGGATATCGTTCATttctgcactttattttaaaacgcTTCGAGCCCTTATAATAAGCACTAGCGACCTCTGCGTGAATGCTTGAGTGCGTGTGAGGTTACGTATGCCTCTTTaatttggtcattttattttattattgtgtggCGTTTGCTGCATAACAAATCATATTGAAGACAGCCGGAGGCGGAGGtggtatttaattttttttttttaatttgggaCATTGAAAACTGTTGTTAAAACTGCAAACGTTTGCACGCATCACTTTTTATCCCAGTGTTTCACTCGGACTGACATGTTTTTTATAGTTTGCACTGTATAGTTTGTACACCGCAATACTCTACAGGTGTTTTGAATGTGTCtgttatttaaagatttatttattatatatatatttgatgcatttacTTTAGGCGATGACTTTTGACTAACTGTATAaacaagtatataaataaaaggaatgCATATCAGTTTTGCGCTTCCTGTCGTTTCTGCGGCTGAGtgcaaatgatctttttttaagaaaattaaatgttaatttaacacTCACGGCACTGCTATAAAAACCTGGTTGTCTAtatgaaatgctattttaatattgagACATTTTTAGGATACATTTTCGGGTTTTGGACTTTTGTTTTATGCCtttgacattttcattcatttttatctattttttaattctgataTCTGTGTCAaggcaacatttaaaatttttcctTTAGATTTTTGAAGTTCAAGtttaacacaaaatatgaatcatttattttattccggCTTTATTTCAATCAACAGAAATGTTATCTAGCTATTCAAGTTTTGGCCAAAAATTCGACTATGATGAGAAATGCCTACATTTATGAAAACCCCCGCTTAGTCTAAATGCCTTTATCCCCaaaccggaaaaaaaaaaaatggtgcagaaacaattttcacaattaattacataaCTACATCAGTAAAAAGTGTCTTCTTGTAAAGCATACTCCAGCAATATTTTTACGACATCAAGGGGAAAAAAGCGGCGAATTAAAACATACAGCGTGCTTaacttaaaaaattaatttcagattCAATcgtattcaaaaatatatattattatgattaataaaaagtgtCTTAGCTCAAACAAAGCATGTCTTTTATAGTAGATTTTAACTCgaaatattcaagtaaaaagacaaattgcattttcttaaaatgcattgcaatgatcttttttgtgtttacaatttttttataaaactaattCTTGCATTATAATCAGCCAacattcaaaaatgcatttcttatattacattacaatatatgATACTATATTAGAAGGGTTaggtataatgcattatgtcTCCATCTAgtgtttcatatttcaaaatgacacTGAACAGCTTATTTGCAAGCACTGGCGTAAAAGACAGCattgtgtgtaataataataataataataatacaaacaatgCACAGAAAATAGCGTAGGGGAGTATGATGTATGATTTTTGTCACACGCCACTGTTTGCAAAGCACATGTTAGTCCCTTATGTAGCTacagtatgaatatatatgcataatgaTATATTTAGCAACttctggtgaaaaaaaaaagctacactAATGTTGGCTTCATTCAAAATCTTACAACAAAATCACACTGTTTTCCAAATATGCTTCTAGAGAAGCTTCTGTCACACATCCTGCTGGCAGAAAagtgtatatacaatatatatataaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG:

id description
K04910 KCNH7, KV11.3; potassium voltage-gated channel Eag-related subfamily H member 7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU108588 lncRNA downstream 43825 26054867 ~ 26062832 (-) True G73385
TU108585 lncRNA downstream 45539 26056491 ~ 26061118 (-) False G73385
TU108574 lncRNA downstream 61244 26044164 ~ 26045413 (-) True G73379
TU108474 lncRNA downstream 140763 25945401 ~ 25965894 (-) True G73308
TU108534 lncRNA downstream 244245 25860328 ~ 25862412 (-) True G73351
TU108650 lncRNA upstream 85056 26272687 ~ 26274866 (-) False fign
XM_043248740.1 mRNA downstream 1841 26082148 ~ 26104816 (-) False ifih1
XM_043248739.1 mRNA downstream 1841 26082148 ~ 26104816 (-) True ifih1
XM_043248248.1 mRNA downstream 25870 26068238 ~ 26080787 (-) True LOC122351282
XM_043249390.1 mRNA downstream 39644 26065212 ~ 26067013 (-) True gcgb
XM_043249521.1 mRNA downstream 186961 25862753 ~ 25919696 (-) True LOC122352035
XM_043248151.1 mRNA upstream 84745 26272376 ~ 26331126 (-) True fign
XM_043248150.1 mRNA upstream 84745 26272376 ~ 26330226 (-) False fign
TU108498 other downstream 253363 25847817 ~ 25853294 (-) False LOC122351758
TU108525 other downstream 274301 25794083 ~ 25832356 (-) False LOC122351758
TU108526 other downstream 287446 25794083 ~ 25819211 (-) False LOC122351758
TU108524 other downstream 313601 25790517 ~ 25793056 (-) True G73347
TU108462 other downstream 647915 25456414 ~ 25458742 (-) True G73300

Expression Profile