RNA id: XM_043248151.1


Basic Information

Item Value
RNA id XM_043248151.1
length 7470
RNA type mRNA
GC content 0.42
exon number 2
gene id fign
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 26272376 ~ 26331126 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTTCTCTAGAGCAGCTGTTTGGGGTTTGAAATTCCAACATGGCAGAGGCAGTGGTCAGTCTTCCCCACACTAACTTGGAATGGTTTCAAGTCGCTTAACCCGCGCAAGCATTCATCAGCGAGCCCGTCGGATCGATGCCGCTCTAACCCGAGAGGTTATCCTGTCATACTAACAGGCTTAAAGATGCAGTGGACCCCAGAGCATGCGCAGTGGGCCGAGCAACATTTCGACATCTCATCCACCACACGTTCCCCCGCACATAAAGCAGAGGCATACCGTGGACACCTGCAGCGGACCTACCAGTATGCCTGGGCCAATGACGATATATCAGCACTGACGGCCTCCAACCTTCTGAAAAAGTATGCAGAGAAGTATTCCGGTATCCTGGAGGGTCCCAGTGAGCGGGCGCTCCTGTGCTCGTACTCCGAGAGCGCCCCAGGACTCTTAAACGGACGCAAGTCGGAAAGCGAAGCATGGCAGGAGGGGATCTACCCAATGAGCTGTGCTGCAGATGTGGTTTCTGCAAGTAAGACTGGCATGACGCCTGCTCTGCCTCCTCCAGATGTGACGGCAAGCGTTGGCAGCTCCGCAGGGGTGGCGAGTAGCTTGAGTGAGCCCAGCTACTCCAGCAGTAACTGCGGGAATCATGCGTCTACTGCACTGCACTCGGGGATCCCCTCTCAGGAATTCGCTAGCAGTTACAATGGCTCATACTTGCATTCTACTTACAGCGGCGGGCAAAGCACACCAGCTCTCCCATCCCCACATCCCTCACCTTTGCACAGCGCTGGGCTTCTTCAGCCTCCACCTCCGCCACCTCCAACCCTAGTGCCCAGCTACAATGCAAGTTCCCCCAATCTCTCCAGTTACAATTACCCTCCAGCTGGTTATCCCCCACAGACTGCTGTTGCCCCAGGCTACAGCCCAGGAGGAGCACCCCCTCCCTCAGCTTACTTGCCCTCAGGCATTGCTGCCCCCACTCCCCTGCCCCCTTCCACCCTTCCCGGTTACTCCTACCAGTCCCACAACCATGCGCCAATTGCACCAACACCTTTGAACGGCAGCTCGGCCAACACATTGAAAAGAAAAGCGTTTTACATGACGGGCCAGGGAGATATGGACTCCAGTTATGGAAATTTCAACTACAGCCAGCAGCGTTCTGCTCAAAGCCCCATGTACAGAATGCCAGACAACAGTCTTGTTGACTCAACCAGAGGGAATGGATTTGACAGGAACGCTGACACATCATCTTTGGCATTTAAGCCCACGAAGCAGTCAATGCCACCGGATCAACAGCGGAAATTCGGCAGCCAGTCCGGGAGGGCACTAACCCCTCCTTCTTATGGATCCTCCAAAGGCTCCTTGGGACCCCTGCGACCAGGCGAGTCGTTTGGAAAGTTCGGCTCCCCGGTTTTGAGTGACCACGGTGACGACAACAGACAGCATCACCCCCATTCCATTGGCACAGCCACTTCATCCAGCCACCCCGCTGAGGAGCAGTTAAAAAACAGCGATGCTAGTTTGGTAGAGATGGTCACCACTGAGATTCTGCAGCAGACACCCCCTGTGGACTGGAGTGACATTGCTGGACTGGAGATGGCAAAGGCCACCATCAAAGATGAGGTCCTGTGGCCTATTCTGAGGCCAGACATGTTCAGCGGCATGGCCACATTACCTCGCAGCATCCTTCTCTTTGGACCTCAGGGCACGGGTCGGACTCTGCTCGGCCGGTGTATGGCCAGTCAGCTTGGAGCAGCTTTTCTTCTTCTAAGTGGCTCTGCACTGGTCACAAAATGGCTTGGAGAGGGCGATAAGATCGTCCAGGCCTCGTTCCTAGTTGCTCGCTGCCGGCAGCCTTCCGTGGTTTTCATCAGCGACGTAGATCTGCTGTTGTCTGCCCAGTTGAGTGAAGAAAGTCCTGTGAACCGAATCAAGAGTGAACTCCTCCTCCAGCTCGATGGAGTTCTAAGTTCTCCAGAGGAACATGTTCTAGTAGTATGTTCCACCAGCAAACCCGAAGAGATTGATGAGTCTCTACGAAGGTACTTTGTAAAGCGGTTGCTCGTCCCCTTACCGGATGCCACCGCACGACACCAGATAATCAGCCAGCTGCTCTCACAGCACAACTACTGCCTCAGCGACAAAGAGGTTGCGCTGCTTGTTCAGCGGACAGACGGCTTCTCCGGGTTGGATGTGGTCCGACTTTGCCAGGAGGCCATGGTTGGTCCTCTCCATGGCATGTCCGGCGCAGACCTTTCCGGAATGATGCCAGGTCAGATGAGACCGGTTTCGTACCAAGACTTTGAGAATGTGTTTTGCAAAATCCAGCCCAGCATATCCCAGAAAGAACTTGATACATACACTGAATGGAATAAGATGTTTGGTTGTAGTCAGTAAAGAGCGGGGGCATAATGAAATCTGTGGTGGCCTCCTCTTCTCTAAGAGGGGATACAATTCAGAATTCTTTGGGTGACACATGCAGTTAAAAAGTGTGGTTATTACAAATGTAGATGACCCCTAAAGAAGAACCTGAAGGACGGTCTGATACAGTTGAATGATGCATGGCTGTACTTAAGTCAAGGTCTGGCCCTTTGCACATAATCCAGACAGAGAAATACTGTTTTCTGGGCTCAGTACTGCAGACGCAGAGCTCCGCTTACCGAGAAACTCTGTAAGTGAGGACAAACTTCTTTGTGTGTAAATATCATTCTGCtgtttttgagattttgttGCTATGAAGTGCCTGAAGTGGTGCTTTATTGATTTGTATTTGGATTTGTTTGCCTCACCATCTACATTGGTGGCATGTGCTAATATAGAGAGCTTTAACATGAAACTAAATCAGACATGTTCTGCTTTTCGTTCCTTTCCTTGTTTTTCGACACTTCTCTCAAAAGAACAACAGTATTCCTCAATCAAGTCTGACCTGTAGACCCCAGGAAGGGCAGGAGAAGGTCCGTGTTGTACTTTGAATCTGGATCATAAGTTATGAAATTCgtttgtgtttgattttcttcaaaaactCAGGAAAGTGATTGTGATTTGTACAGTACCTCAAAAAAGATTATGCGATAGCACTACATACTGCTGACTACATTGGGTTTGGTTTCTAATTTGCTTCTTCTAAAATTCTAGGTTTAcctcaaacaattaaaaaaaaatgaaaaggataTGACTATGAATGTAACCAGAACATTTCTGGGTTGTTTGGAAGAAAAATTTGGGGAGTTTCTTTCTCTTCCGTTATATTCTTATTGTTCTTTCCAAATTACGTTGAAATTTCATTGTGGACAttgctttaagttttgaaagcAGAATTGTGTGCCAGTATTGACTACAGCACCTGTTCCTCCCTGCATAGCAGTTCAGACTCTACAACGAACGCTCAGAAATGGGCACTATCTGTTGTGTAGATAAGGTTAGTCCGAAACCACATCCACGTCAGAGTATGCAGTAGACGTCACTATTTGCGTTTGTCTCCTTTCTGCAGAATAGAGTTGGAGTGAACCAAAACTTTAGAAAGAGGCTACTAGATTCTTGAAGtggaaatattttcacatttttcgtAACGGTTTCGTATGTTTCGTTTTTGTTTCGGACTCTGTCCTGCTGCTGTGTGGTGTTGGTGTAAAgatatctgaaggatcacgtgtaCCCTGCATTCTGTTCTACCTCAGTTTAGCACTATTTTCTCTGCAACTAGAACAGAAAGATGAGAGCTTGGTGTCTTCAACCTCTTTAGGTTTGCTCTGCTCTGAAGCCTCCATAAAGAACAAGCTgcctttttttccaaaaaaaaaaatgaaaaaaaaatgaaagaaaagaaacaacaaacgTTTGTCTACTACCTGTGCAATTCTTCTGCTTCGAGTGCCCAGATGACACTGAACACCCCtttgtgtaaacacacacacatatattattgaTGGGGGTCTCTATGGGGCCACTTACTGGGGCCACGTTGCCTAAAGTCAGAAACCTACTCTACGCAAGTATGCAAGTGCTCATAGCAACGCAAGTTAAAACATTGCTAGCTTTGTTGCTTTCCAAAATACGTCAGACTGCAATTCATAACATAACACTGAAGTGTCGCCACTATAAactttttctacatttatgcTGCATCTCAATTTGCATACTATTTATCCtaaataatgttcaaaaattataattactgtGTCCCAAATGGCTGTAGGCCTATGCTGAATGAGTATTCCAAAGGTACTCAAGATTTCATGGAAACTTTAATGgctaatatttcaaattaattacaactacaaacaaatgtataattaattttttttgataagTTATTGATATCATTATATAACATCTAGAATTTTGAAAAGATACGTTTGGTCATTAACctttaaatgcatctttatgCAAAAAGACCGGCAGATCAATGTGGTACTTAATTACTCTAAGGTGGTATAACTGATTTAAATGCAATCTGGAGGGTGTTAACTGTGACAACTTGATTGACCGGGCATGTTTAAACAGTGATGGGATACACGTAACCAATCAACGAAGCGGTCTGCGCGATAAAAATTGCATGTGCCAATGAGAGCATACTCTTAGGACTTTTAGGACTTGGTATAAGGATGCAGCATCGATACAGTTACTAAAATGGTGACATAACGGTTTATCTATAGACTCTTGCTGAGCAAGTTAGTcaaacactttatatttttatgtttgtgcacCCAGTTTCCTTACGCCACCTTGAGCATGGAGGCATCTTTTTCTTCATTCAACAGGCTCTCGCAATGCTTTAACTAAGCGTTTGCTTTTGTGTACTTGCATACAGTATGTTTCTAGCCCAAGGTAGCACAGGATGTTGGTAACTGTAAGGGGAAACTTgtgtttgaatgtatttttttgtttgtttcttgatATGTTTACTTTCTCTGATCATTTGtgtcagccttttttttttttttttttttgtttagcacTAGAGAGTTGAAGCGATGTGTTTCCTCAAtcagtctttctcttttttttttgcctgtctTTATATCATGTCTCTCAAATGTTGGAAAGGAATGCActgttttcaactttttttcttttttgtccaCTGCAGTGTAATTCGACACCATTTTAAGGTGCTTATTTAGCAGTTGGAGGCACCAGATCTccaatacgtgtgtgtgtgtgtgtgtgtgtatatatatgacatatCCTTGAAGAAATATCTGCTTTTTCGACAGACATCCAGATAGTCTTTTCAGTAGCTGTGAGACACCACTTTCTTCACAATGTTCGTAAAGTGATATGTACACCCAAAGGACTACGATTTCTAACCTTGTTTTGTCGTCTGAAGtggaaacctttttttcttcttaagtGGTATTCTgccttcttttgttttgtgttgttttgaaaaaaaagttactattGTGCAATTTgtcaaatgcacttttaacgTTTTGTGTTAAAGCCTATCACACTTAATTGTCCTCCCTCAAAACCAAAGCGAACAAAACTATTTCTGATCAAAACCTGATCCGTATCTCTGAAGATTTGAATTCATCCACACATTTAGGGAAACTTATATAGGACTTCACCCGTAATGTTCACAAAGTTTAGCTCCCGTTTTGTTGAAAACGATCAAGCTCTGGATTTAAAAGCCAAATAGCACTGATGAACAAAACCCACGTTGACCCTGAAAAGTACAAATGATCTTTTAGTCTTACCGCTGGTGTTTTCTAGGGCTGGTGCTCTACGGTAATGTTTGTAGCCTAAATGCTCTTGAACAAAACCGATTGCtaaattttattcttaaaaGCTCTTTGTGATTGGTTAAAGGAATGTTCTTGACCGCATAATATAAATTAGGGTTTGCTTTTAACACAAACCAAGCTCACTGTAACTTTACAAGAACACGGTTTAAGACTAGTCTGATTGAATATAATTTACTGTCTTTTTGTTAAAGCTGTAACCAATTTTTTTCATGTCATGACAGAGATGCAGTCCAGCCAACAACTCCACCATATTCAGCCGTTCATCCACTAGAAAAGTATTCCCACTTCATAAAGGTCgatttaaacaaatttacagCTTTGTGCTGCATAATTCATGTAAGTGCtttaacaaaaatgcttttaaacccTCCAGCACTCTTGACCTGTTTACTTCCATTCCAAGTGTTACTGTAACTAtgaattttgatttgtttttttaaacagaaaaaaaaaaaaaaaaacaactgaggGATCAGTCCAAATTATTTTCAGCGGTAATCAATATCACGCCATCGATAGAGCTTAGCTCGCATTGAACCGGAACATTCCTTTAATTGATCgcagagaaaaaaaggaaatgtggGAACATCCAAAAGGTACAAAGTTATAAAGCACATCTCCTGTGTAGATAAGAATGCTTTTTGATTGAGTTCCGTTCCGGGTTTGTGTGTTCGTTTGCTTCAGCGCCGCTGTGGACGGTGGTTTCTTTTCAAGTGTCACCAGTGTTTGTTTTTCGACCATTATTCTTTACGACCATTTCTACCTCATTGCTACATATTGACATGTAGTACTTATGTTCTGTCTTTTTTGAATGTCACACATttgtataaaagaaaataaaaaaaaggaagaaaaacgtataaaaaggatttaaaagaacaaaaaaaaaaaccaacccaTGAAAAAGGCTTGTTCTTTAACCTGAGCAGTCTACCTCAGAGAGACTGTCTGTCCGTACACTGAGCAGTGGAGTAGCTGCACATACTGAAAAAGACACATTAGGCAGAGACGATGCACACTGACCACACCAACTCCACCGTCTGGGATATTGTGGACTGTATAGGTCTTCTCCAAGGTCTCTacatgcaaatttttttttctttcgtttcTCAATCGAAGTAAATCGCTTTCCCCCTTCGTGAACTGTAGTGTGCATGtggatgtgtatgtgtgtgtgcacttatTATGAAGTGTGTAAGTGTGCATTTTTCTATATGAAAATTCTATATGAAATGTAGGTACATTTCATATACCATATTTGTACATTAGATACACTTGCACATTTGTGTACttaatgtacatttgttattagTATAACATTTTGAAACGCACCACATACatgttaatatgtgtgtgtatgtacaatATTGCCATAATTACATTCAacgtaaatgtattttcatgtatGCATAGGGACAAAGGACAATAAAAGATCATTCAAATGCTTTTGAAACgtcgtgttttatttttagttttctattGCATTCCAGATGCATCACAATTTTAGTTCAAATCTCTCTAcgaatctgtttttttttttttttgcttttctctattgaaatgaaatgacatGGTAAATGGAAAGGTGTATTTGAGAGAGACCTATACACTGCACAATATATCGAACATTAAGGGTTTTGTTTCCTGCTGGTTTTTGTGAACTTCCCATTTgtggaaaaaatgaataaaaagttactCATAACTGAGCACCAGCACAGAC

Function

GO:

id name namespace
GO:0016363 nuclear matrix cellular_component
GO:0005815 microtubule organizing center cellular_component
GO:0005874 microtubule cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0017111 nucleoside-triphosphatase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU108631 lncRNA downstream 164970 26106895 ~ 26107406 (-) False LOC122351579
TU108588 lncRNA downstream 209544 26054867 ~ 26062832 (-) True G73385
TU108585 lncRNA downstream 211258 26056491 ~ 26061118 (-) False G73385
TU108574 lncRNA downstream 226963 26044164 ~ 26045413 (-) True G73379
TU108474 lncRNA downstream 306482 25945401 ~ 25965894 (-) True G73308
XM_043248741.1 mRNA downstream 84745 26106657 ~ 26187631 (-) True LOC122351579
XM_043248740.1 mRNA downstream 167560 26082148 ~ 26104816 (-) False ifih1
XM_043248739.1 mRNA downstream 167560 26082148 ~ 26104816 (-) True ifih1
XM_043248248.1 mRNA downstream 191589 26068238 ~ 26080787 (-) True LOC122351282
XM_043249390.1 mRNA downstream 205363 26065212 ~ 26067013 (-) True gcgb
TU108498 other downstream 419082 25847817 ~ 25853294 (-) False LOC122351758
TU108525 other downstream 440020 25794083 ~ 25832356 (-) False LOC122351758
TU108526 other downstream 453165 25794083 ~ 25819211 (-) False LOC122351758
TU108524 other downstream 479320 25790517 ~ 25793056 (-) True G73347
TU108462 other downstream 813634 25456414 ~ 25458742 (-) True G73300

Expression Profile