RNA id: TU98662


Basic Information

Item Value
RNA id TU98662
length 389
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G66672
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 513249 ~ 513637 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTAAGAAGACTCTGCGCGGGTTAGTGCAGAGCCACACGGCAGTGACGACTGAGTGTGAGGAAAGAGGACGCGTCCCAGGTACAGGTAAAGTCTCGGATTGCAAGTATGGGGTCTAGTAATGTCAAACCTGAAATCGATCTAGACGATTTGAACAGCCCAATTTATGttgacatgagaaagaaatatggacaGAGAATTATGGAAGTGATACCGATTTGGATCGAAGATCATGATTTTCCAAAAAGGGGCACGTTTAGTGTGACGACTCTAAACAGGGTGAAGGAAAGTTTGGAAAAGCGTGAAAGTAAACTTAGGGAtgagaaaaagttgaaaaacaaacaaaaagatctgtttcagaaacatagacAATATCTGAACTATTGGCTAGA

Function

GO:

id name namespace
GO:0016832 aldehyde-lyase activity molecular_function
GO:0004332 fructose-bisphosphate aldolase activity molecular_function

KEGG:

id description
ko05150 Staphylococcus aureus infection

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU98638 lncRNA upstream 96240 351696 ~ 417009 (+) True G66658
TU98670 lncRNA downstream 36470 550107 ~ 556547 (+) True G66676
TU98691 lncRNA downstream 48060 561697 ~ 564622 (+) True G66686
TU98696 lncRNA downstream 69870 583507 ~ 601810 (+) True G66690
TU98708 lncRNA downstream 163546 677183 ~ 678359 (+) True G66702
TU98710 lncRNA downstream 169813 683450 ~ 685283 (+) True G66704
XM_043248466.1 mRNA upstream 133225 378075 ~ 380024 (+) True LOC122351407
XM_043248464.1 mRNA upstream 373574 47876 ~ 139675 (+) True LOC122351404
XM_043248517.1 mRNA downstream 291507 805144 ~ 822378 (+) True LOC122351437
XM_043248872.1 mRNA downstream 346139 859776 ~ 899379 (+) True LOC122351650
XM_043248885.1 mRNA downstream 385993 899630 ~ 907921 (+) True LOC122351660
XM_043248871.1 mRNA downstream 396394 910031 ~ 933338 (+) True LOC122351648
XM_043248879.1 mRNA downstream 534777 1048414 ~ 1058016 (+) True LOC122351656
TU98627 other upstream 51220 459574 ~ 462029 (+) True G66657
TU98754 other downstream 283496 797133 ~ 805009 (+) True G66727
TU98782 other downstream 345043 858680 ~ 860156 (+) False LOC122351650
TU98836 other downstream 613889 1127526 ~ 1134989 (+) True G66795
XR_006251792.1 other downstream 1200176 1713813 ~ 1729395 (+) False bpifcl
TU99551 other downstream 2681158 3194795 ~ 3196521 (+) False LOC122351419

Expression Profile