RNA id: TU98696


Basic Information

Item Value
RNA id TU98696
length 350
lncRNA type inter_gene
GC content 0.39
exon number 2
gene id G66690
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 583507 ~ 601810 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtttatttgccatttatacaaacatacataaaataaaaatgtacgttgtagcaacctgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgctgcttcaaAAGATCAaacatatcaatcaatcaatcatttttatttatatagcgcttttaacaacacaggttgcatcaaagcactgtacagtataatgacagggatgtataatgacgagagtgaccaatttcttattaaatgcagagacggtctctgtagtcaattcaacgatagtcactagaagttaagtgtccccaaccaagcaagccagaggcgacagcggcaaggaaacaaaac

Function

GO: NA

KEGG:

id description
ko04710 Circadian rhythm
ko04711 Circadian rhythm - fly

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU98691 lncRNA upstream 18885 561697 ~ 564622 (+) True G66686
TU98670 lncRNA upstream 26960 550107 ~ 556547 (+) True G66676
TU98662 lncRNA upstream 69870 513249 ~ 513637 (+) True G66672
TU98638 lncRNA upstream 166498 351696 ~ 417009 (+) True G66658
TU98708 lncRNA downstream 75373 677183 ~ 678359 (+) True G66702
TU98710 lncRNA downstream 81640 683450 ~ 685283 (+) True G66704
TU98716 lncRNA downstream 117763 719573 ~ 719789 (+) True G66707
TU98717 lncRNA downstream 130681 732491 ~ 732741 (+) True G66708
TU98719 lncRNA downstream 133873 735683 ~ 735946 (+) True G66710
XM_043248466.1 mRNA upstream 203483 378075 ~ 380024 (+) True LOC122351407
XM_043248464.1 mRNA upstream 443832 47876 ~ 139675 (+) True LOC122351404
XM_043248517.1 mRNA downstream 203334 805144 ~ 822378 (+) True LOC122351437
XM_043248872.1 mRNA downstream 257966 859776 ~ 899379 (+) True LOC122351650
XM_043248885.1 mRNA downstream 297820 899630 ~ 907921 (+) True LOC122351660
XM_043248871.1 mRNA downstream 308221 910031 ~ 933338 (+) True LOC122351648
XM_043248879.1 mRNA downstream 446604 1048414 ~ 1058016 (+) True LOC122351656
TU98627 other upstream 121478 459574 ~ 462029 (+) True G66657
TU98754 other downstream 195323 797133 ~ 805009 (+) True G66727
TU98782 other downstream 256870 858680 ~ 860156 (+) False LOC122351650
TU98836 other downstream 525716 1127526 ~ 1134989 (+) True G66795
XR_006251792.1 other downstream 1112003 1713813 ~ 1729395 (+) False bpifcl
TU99551 other downstream 2592985 3194795 ~ 3196521 (+) False LOC122351419

Expression Profile