RNA id: TU98719


Basic Information

Item Value
RNA id TU98719
length 264
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G66710
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 735683 ~ 735946 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

cAATAActcttttttgggcatgattttattcaataaataccctggatgacagttttctataAGGTTCGTGCTGACAGACTCACACCATTAAAGGGCatgaatttcagagtttttagagaaaaaaaattaaagttgacgTAAAAGTTGCTCTTGGGTAAATGATTACCTCCGGGGCCGTGTGAAAATTTGAATCACGCTCGGGAAGATGTCTCTCGgccggcctgactcggagcttCGGAGGGTATAGAAGTCCGACATTTCCCC

Function

GO: NA

KEGG:

id description
ko04060 Cytokine-cytokine receptor interaction

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU98717 lncRNA upstream 2942 732491 ~ 732741 (+) True G66708
TU98716 lncRNA upstream 15894 719573 ~ 719789 (+) True G66707
TU98710 lncRNA upstream 50400 683450 ~ 685283 (+) True G66704
TU98708 lncRNA upstream 57324 677183 ~ 678359 (+) True G66702
TU98696 lncRNA upstream 133873 583507 ~ 601810 (+) True G66690
TU98721 lncRNA downstream 4480 740426 ~ 740664 (+) True G66712
TU98753 lncRNA downstream 55182 791128 ~ 791330 (+) True G66726
TU98758 lncRNA downstream 80819 816765 ~ 816985 (+) True G66731
TU98760 lncRNA downstream 88011 823957 ~ 824312 (+) True G66733
XR_006251789.1 lncRNA downstream 106056 842002 ~ 842336 (+) True LOC122351670
XM_043248466.1 mRNA upstream 355659 378075 ~ 380024 (+) True LOC122351407
XM_043248464.1 mRNA upstream 596008 47876 ~ 139675 (+) True LOC122351404
XM_043248517.1 mRNA downstream 69198 805144 ~ 822378 (+) True LOC122351437
XM_043248872.1 mRNA downstream 123830 859776 ~ 899379 (+) True LOC122351650
XM_043248885.1 mRNA downstream 163684 899630 ~ 907921 (+) True LOC122351660
XM_043248871.1 mRNA downstream 174085 910031 ~ 933338 (+) True LOC122351648
XM_043248879.1 mRNA downstream 312468 1048414 ~ 1058016 (+) True LOC122351656
TU98627 other upstream 273654 459574 ~ 462029 (+) True G66657
TU98754 other downstream 61187 797133 ~ 805009 (+) True G66727
TU98782 other downstream 122734 858680 ~ 860156 (+) False LOC122351650
TU98836 other downstream 391580 1127526 ~ 1134989 (+) True G66795
XR_006251792.1 other downstream 977867 1713813 ~ 1729395 (+) False bpifcl
TU99551 other downstream 2458849 3194795 ~ 3196521 (+) False LOC122351419

Expression Profile