RNA id: TU99198



Basic Information


Item Value
RNA id TU99198
length 209
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G67048
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 1769380 ~ 1769588 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATGGCTGTCATCCAGAAGCGCTTTGTTGGCCGTGGCACTGACAACATAGCCCACAGGAAGATCAGGATGGGCAGGAAGAGTGTTAGTAGAGAGGCAGACACCATGTGATTTAAGATAATCACAAAGTAACAGAACATCTCTGACTGAGACTCCATCAAATTGTAGAGAGCAAAGATGAGACGCACAGCACAAGACAACGAAGAGTAGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251855.1 lncRNA upstream 73851 1693724 ~ 1695529 (+) True LOC122352111
TU99157 lncRNA upstream 76904 1688655 ~ 1692476 (+) False G67023
TU99158 lncRNA upstream 76904 1688655 ~ 1692476 (+) True G67023
TU99160 lncRNA upstream 76904 1688655 ~ 1692476 (+) False G67023
XR_006251746.1 lncRNA upstream 94782 1671371 ~ 1674598 (+) True LOC122351376
TU99207 lncRNA downstream 9326 1778914 ~ 1779210 (+) True G67057
TU99214 lncRNA downstream 92266 1861854 ~ 1865589 (+) True G67064
TU99217 lncRNA downstream 92266 1861854 ~ 2086178 (+) False G67064
TU99224 lncRNA downstream 125894 1895482 ~ 1903183 (+) True G67071
TU99225 lncRNA downstream 125894 1895482 ~ 1903183 (+) False G67071
XM_043248938.1 mRNA upstream 33060 1713813 ~ 1736320 (+) False bpifcl
XM_043248941.1 mRNA upstream 33060 1713813 ~ 1736320 (+) False bpifcl
XM_043248939.1 mRNA upstream 33060 1713828 ~ 1736320 (+) True bpifcl
XM_043248940.1 mRNA upstream 41850 1713812 ~ 1727530 (+) False bpifcl
XM_043248412.1 mRNA upstream 80911 1660010 ~ 1688469 (+) True LOC122351375
XM_043248603.1 mRNA downstream 92221 1861809 ~ 1865607 (+) True ndufa4l2a
XM_043248592.1 mRNA downstream 375917 2145505 ~ 2201714 (+) True LOC122351505
XM_043248142.1 mRNA downstream 484969 2254557 ~ 2258615 (+) True LOC122351218
XM_043248238.1 mRNA downstream 724893 2494481 ~ 2499298 (+) True nr4a2a
XM_043249416.1 mRNA downstream 1129575 2899163 ~ 2908133 (+) True pou1f1
XR_006251792.1 other upstream 39985 1713813 ~ 1729395 (+) False bpifcl
TU98836 other upstream 634391 1127526 ~ 1134989 (+) True G66795
TU98782 other upstream 909224 858680 ~ 860156 (+) False LOC122351650
TU98754 other upstream 964371 797133 ~ 805009 (+) True G66727
TU98627 other upstream 1307351 459574 ~ 462029 (+) True G66657
TU99551 other downstream 1425207 3194795 ~ 3196521 (+) False LOC122351419
XR_006251861.1 other downstream 2144050 3913638 ~ 3922878 (+) True LOC122352174
TU99912 other downstream 2178448 3948036 ~ 3951311 (+) True G67566
TU99910 other downstream 2211939 3981527 ~ 3983582 (+) False G67566
XR_006251811.1 other downstream 2350939 4120527 ~ 4125450 (+) False scrn3