RNA id: TU99592



Basic Information


Item Value
RNA id TU99592
length 321
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G67347
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 3385630 ~ 3385950 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCTAAATTAAATCATGGTAACAGGGTTAACATTTTGTACAGACCGCTTGCTGAGTTAAATAATGTGTGAAAGATTGTCTCGTCTAATAGTTATTTGTTGAAAGGACATAAATTGTATAAGCAACTGTTTGTGGTTTAGCTCTTTATTCCCCCAAAAGTCATTAATCTAAAGCTGCAATACTCCTTAGAAACAGCCTAAAAGGTAACAGGGTTGACAGTTTAATGGTGTGCAAGGTCATAACACTATatggaaaattaattaatgtaatgctGACATTTCTGTAAACATCCACTTAATTATCgtaagtcattttaaacaaat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU99544 lncRNA upstream 105578 3266991 ~ 3280052 (+) True LOC122351398
TU99543 lncRNA upstream 106303 3263497 ~ 3279327 (+) False LOC122351398
TU99533 lncRNA upstream 332408 3052494 ~ 3053222 (+) True G67296
XR_006251720.1 lncRNA upstream 428432 2955344 ~ 2957198 (+) False LOC122351258
TU99473 lncRNA upstream 428433 2955400 ~ 2957197 (+) False LOC122351258
TU99593 lncRNA downstream 1022 3386972 ~ 3387192 (+) True G67348
TU99656 lncRNA downstream 33137 3419087 ~ 3424421 (+) True G67389
TU99667 lncRNA downstream 51147 3437097 ~ 3441744 (+) True G67396
XR_006251741.1 lncRNA downstream 200853 3586803 ~ 3592240 (+) False LOC122351351
XR_006251740.1 lncRNA downstream 200853 3586803 ~ 3592240 (+) True LOC122351351
XM_043248472.1 mRNA upstream 1453 3363734 ~ 3384177 (+) True epsti1
XM_043248473.1 mRNA upstream 2826 3363734 ~ 3382804 (+) False epsti1
XM_043248461.1 mRNA upstream 106290 3262607 ~ 3279340 (+) False LOC122351398
XM_043248480.1 mRNA upstream 189012 3194773 ~ 3196618 (+) True LOC122351419
XM_043249066.1 mRNA upstream 247685 3054362 ~ 3137945 (+) True enox1
XM_043248786.1 mRNA downstream 121975 3507925 ~ 3584691 (+) True vwa8
XM_043248787.1 mRNA downstream 121975 3507925 ~ 3572856 (+) False vwa8
XM_043248433.1 mRNA downstream 284612 3670562 ~ 3742739 (+) True mycbp2
XM_043248434.1 mRNA downstream 284612 3670562 ~ 3742739 (+) False mycbp2
XM_043248435.1 mRNA downstream 284612 3670562 ~ 3742739 (+) False mycbp2
TU99551 other upstream 189109 3194795 ~ 3196521 (+) False LOC122351419
XR_006251792.1 other upstream 1656235 1713813 ~ 1729395 (+) False bpifcl
TU98836 other upstream 2250641 1127526 ~ 1134989 (+) True G66795
TU98782 other upstream 2525474 858680 ~ 860156 (+) False LOC122351650
TU98754 other upstream 2580621 797133 ~ 805009 (+) True G66727
XR_006251861.1 other downstream 527688 3913638 ~ 3922878 (+) True LOC122352174
TU99912 other downstream 562086 3948036 ~ 3951311 (+) True G67566
TU99910 other downstream 595577 3981527 ~ 3983582 (+) False G67566
XR_006251811.1 other downstream 734577 4120527 ~ 4125450 (+) False scrn3
TU100018 other downstream 755104 4141054 ~ 4222171 (+) True G67630

Expression Profile