RNA id: TU99593


Basic Information

Item Value
RNA id TU99593
length 221
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G67348
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 3386972 ~ 3387192 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtttatttttacgtATGCCAAAGTAGTTAAGAAGAAACATTAGACAGAATGTCATACTTAAAGAAGACATCCAAGTCTCCTGATGTATGAAAGAGCAACTTCTGAGCAATAAAACTGCCAGAGTATTTGACGATGAAAACAGCATCAACAGTGATGATATGACAGATTATATCCCACATGTTTAAGTCGGCATGAGGGTGCGAAGCCAAAATACAGTGTAC

Function

GO: NA

KEGG:

id description
ko04924 Renin secretion

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99592 lncRNA upstream 1022 3385630 ~ 3385950 (+) True G67347
TU99544 lncRNA upstream 106920 3266991 ~ 3280052 (+) True LOC122351398
TU99543 lncRNA upstream 107645 3263497 ~ 3279327 (+) False LOC122351398
TU99533 lncRNA upstream 333750 3052494 ~ 3053222 (+) True G67296
TU99473 lncRNA upstream 429775 2955400 ~ 2957197 (+) False LOC122351258
TU99656 lncRNA downstream 31895 3419087 ~ 3424421 (+) True G67389
TU99667 lncRNA downstream 49905 3437097 ~ 3441744 (+) True G67396
XR_006251741.1 lncRNA downstream 199611 3586803 ~ 3592240 (+) False LOC122351351
XR_006251740.1 lncRNA downstream 199611 3586803 ~ 3592240 (+) True LOC122351351
TU99699 lncRNA downstream 214126 3601318 ~ 3638082 (+) False G67418
XM_043248472.1 mRNA upstream 2795 3363734 ~ 3384177 (+) True epsti1
XM_043248473.1 mRNA upstream 4168 3363734 ~ 3382804 (+) False epsti1
XM_043248461.1 mRNA upstream 107632 3262607 ~ 3279340 (+) False LOC122351398
XM_043248480.1 mRNA upstream 190354 3194773 ~ 3196618 (+) True LOC122351419
XM_043249066.1 mRNA upstream 249027 3054362 ~ 3137945 (+) True enox1
XM_043248786.1 mRNA downstream 120733 3507925 ~ 3584691 (+) True vwa8
XM_043248787.1 mRNA downstream 120733 3507925 ~ 3572856 (+) False vwa8
XM_043248433.1 mRNA downstream 283370 3670562 ~ 3742739 (+) True mycbp2
XM_043248434.1 mRNA downstream 283370 3670562 ~ 3742739 (+) False mycbp2
XM_043248435.1 mRNA downstream 283370 3670562 ~ 3742739 (+) False mycbp2
TU99551 other upstream 190451 3194795 ~ 3196521 (+) False LOC122351419
XR_006251792.1 other upstream 1657577 1713813 ~ 1729395 (+) False bpifcl
TU98836 other upstream 2251983 1127526 ~ 1134989 (+) True G66795
TU98782 other upstream 2526816 858680 ~ 860156 (+) False LOC122351650
TU98754 other upstream 2581963 797133 ~ 805009 (+) True G66727
XR_006251861.1 other downstream 526446 3913638 ~ 3922878 (+) True LOC122352174
TU99912 other downstream 560844 3948036 ~ 3951311 (+) True G67566
TU99910 other downstream 594335 3981527 ~ 3983582 (+) False G67566
XR_006251811.1 other downstream 733335 4120527 ~ 4125450 (+) False scrn3
TU100018 other downstream 753862 4141054 ~ 4222171 (+) True G67630

Expression Profile