RNA id: XM_043248031.1


Basic Information

Item Value
RNA id XM_043248031.1
length 1935
RNA type mRNA
GC content 0.45
exon number 7
gene id slc35a5
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 16694754 ~ 16698639 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCGAACATGAATCTATTTGTGCTTTATCGCCACATTCACATTATAATAGATACACTGTGAATATCCTGTCGTTGAACCGGATGATGGAGTTCTTTTTTTATAGCGTCGGGAGCATCAAAACAATCACGCATCATAATTAAGAGTGATCCTGTTCATTCTCCTGTGAAGGTCCATAATGGCCCCGTCCTCGTCCTCTTCTTTATGCCGCTGCTGCTGTCCTTGTTCGCGGCTGTGCTCAAGATCTTCAGCCTACACTTTGGTACTGGGTCTGGGTTTTGTTACTGTGGGAACCAGTCGCATCCTATTACTAAAATTCTCGGCCAATGAGGAAAACAAATACGACTTTCTTCCTGCATCTGTGAATTTAATGGCAGAAGCCATCAAACTAGTATTTTGTTTAGTGATGTCAGTACGGGTGGTCATTCGAGAGGGCCGTTCCTATAAAGATTTGGGGTGTTCATCTGGTGCCTCTTTTCTCAGCTATCTGAAATGGTCCGTTCCTGCATTCCTCTACTTCCTTGATAACCTTATAATCTTCTATGTGATGACCTATCTGCAACCGGCCATGGCAGTTATGTTTTCCAACATTGTAATTTTCACAACAGCCATTCTCTTCCGTGTTGTTCTGAAGAGGCGCCTGTCTTGGGTGCAGTGGGCGTCTTTGATCATTTTGTTCCTGTCCATTGTGTCGTTGACGACTGGCAGTGGTGACCAGCATGCCATTGCTGTCCACGGCATTCACCCAGCCCACATTTCCACACCTTCCAACAGCTGCCTAAAATACGCCCATCCCGAGCCAGTGCATCAAAACTATAATGACACATCTTGGAAACGTGAGCTGTGGGACAGCCAGCTCATCCACAAGCTGAACAGCTTCGGCCTGGGTTAcgtcctgctgctgctgcaatgCTTCATCTCTGCACTGGCCAACATCTACAATGAGAAGATCCTCAAGGAGGGGGAGCAGCTGGTGGAGAGCATCTTCATCCAGAACAGCAAGCTGTACGTGTTCGGTTTGATCTTCAACAGCCTCACACTGCTGCTGCACTCTGACTACCGTGACCTGACACTGCACTGCGGCCTCCTCTACGGACACAACATCTTCTCCATCGCGCTGGTCTTCGTCACAGCCGCTTTAGGCCTGTCGGTGGCCTTCATTCTCAAGTTCCGGGATAACATGTTCCACGTGCTGACGGGCCAGATCACCACAGTCATTGTCACcgcgctctctctcttcttGTTTGACTTTCGTCCATCGATGGATTTCTTCCTGCAGGCTCCTGTAGTACTGCTTGCCATCTTTATTTACCACAGCAGCAAACTGAAGGATACAGAGTTTGCACTGCAGCAGGAGAGGCTCAGGGTAATCAATGGCGAGGTGTTTGAGAGGTCCAGAGGGgatgGGGAGGAGTTGGAGAGGCTAACCAAGGCTAACACAGAGAGCGAATCTGAAGAAGAATCTTTCTGAGTCCGTTGTAAATATTCTGGGGTCAGcctgtatttgtattatgtacATGTATTATAATGAATGATAATTGTTTCAGTCACATGGAATGTCTGCGACGTGCAAAAGGATCAGAGTTATCTATTTTCTTCTCTTACAAACTGTGTAAACATTGTGAGCATGTATCAAACTCATGAAGGTTTGTGAAAGTGTTACtttgattttatattgtttggACTTTTTGGTTCCTTcatgtagtagtagtagtagaatgAAAgacattaatttattcattcccTCACTTACAAAGTGATAGTGCAGGTATTAAGGTACaaggattatttatttaaattttaatgtacttCTGTAGTGGgattatatttcagtttcaaagcATGTGCCAAATTGTGCATGTCGTATCCGttgacatacatttttttgcagtcaTTTTTGCTATAATAAAGAATCCATTCTAATTCTACATGCTaaaa

Function

GO:

id name namespace
GO:0008643 carbohydrate transport biological_process
GO:0000139 Golgi membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005351 carbohydrate molecular_function

KEGG:

id description
K15274 SLC35A5; solute carrier family 35 (probable UDP-sugar transporter), member A5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006251709.1 lncRNA downstream 63334 16605367 ~ 16631420 (-) False LOC122351188
XR_006251710.1 lncRNA downstream 77730 16605367 ~ 16617024 (-) True LOC122351188
TU104935 lncRNA downstream 81330 16613117 ~ 16613424 (-) True G70956
TU104934 lncRNA downstream 84193 16610270 ~ 16610561 (-) True G70955
TU104861 lncRNA downstream 574435 16118282 ~ 16120319 (-) True G70894
TU104949 lncRNA upstream 14282 16712819 ~ 16713846 (-) False G70962
TU104950 lncRNA upstream 14282 16712819 ~ 16713846 (-) True G70962
TU104957 lncRNA upstream 16985 16715522 ~ 16717084 (-) True G70966
TU104956 lncRNA upstream 20978 16719515 ~ 16720573 (-) True G70965
TU104942 lncRNA upstream 28610 16727147 ~ 16746222 (-) False dcaf6
XM_043248778.1 mRNA downstream 110693 16579731 ~ 16584061 (-) True dipk2b
XM_043248169.1 mRNA downstream 154103 16538368 ~ 16540651 (-) True fundc1
XM_043248411.1 mRNA downstream 156679 16526525 ~ 16538075 (-) True efhc2
XM_043248026.1 mRNA downstream 179310 16509560 ~ 16515444 (-) True LOC122351145
XM_043249228.1 mRNA downstream 189854 16477543 ~ 16504900 (-) False mao
XM_043249387.1 mRNA upstream 22267 16720804 ~ 16744816 (-) False dcaf6
XM_043249386.1 mRNA upstream 22267 16720804 ~ 16744816 (-) False dcaf6
XM_043249385.1 mRNA upstream 22267 16720804 ~ 16744816 (-) False dcaf6
XM_043249383.1 mRNA upstream 22267 16720804 ~ 16744816 (-) False dcaf6
XM_043249382.1 mRNA upstream 22267 16720804 ~ 16744816 (-) True dcaf6
TU104521 other downstream 922890 15771421 ~ 15771864 (-) True G70663
XR_006251733.1 other downstream 1295317 15389849 ~ 15399437 (-) False tmtc4
TU104362 other downstream 1388779 15303103 ~ 15305975 (-) True G70549
TU104031 other downstream 2440978 14196479 ~ 14253776 (-) True G70317
TU103993 other downstream 2754886 13938259 ~ 13939868 (-) True G70294
TU104983 other upstream 118603 16817140 ~ 16823694 (-) False G70986
TU104984 other upstream 118603 16817140 ~ 16823775 (-) True G70986
TU105258 other upstream 537335 17235872 ~ 17255491 (-) True G71118
XR_006251863.1 other upstream 1871218 18569755 ~ 18569882 (-) True LOC122352185
TU106113 other upstream 3021961 19720498 ~ 19721737 (-) False ankar

Expression Profile