Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043248169.1 |
| length | 1004 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 5 |
| gene id | fundc1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056707.1 |
| NCBI id | CM032076.1 |
| chromosome length | 26426558 |
| location | 16538368 ~ 16540651 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0000422 | autophagy of mitochondrion | biological_process |
| GO:0001666 | response to hypoxia | biological_process |
| GO:0031307 | integral component of mitochondrial outer membrane | cellular_component |
| id | description |
|---|---|
| K17986 | FUNDC1; FUN14 domain-containing protein 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU104861 | lncRNA | downstream | 418049 | 16118282 ~ 16120319 (-) | True | G70894 |
| XR_006251840.1 | lncRNA | downstream | 584392 | 15948113 ~ 15953976 (-) | True | LOC122352066 |
| TU104518 | lncRNA | downstream | 775699 | 15762383 ~ 15762669 (-) | True | G70660 |
| TU104479 | lncRNA | downstream | 894092 | 15642259 ~ 15644276 (-) | True | G70633 |
| XR_006251775.1 | lncRNA | downstream | 899932 | 15628883 ~ 15638436 (-) | True | LOC122351574 |
| XR_006251709.1 | lncRNA | upstream | 64716 | 16605367 ~ 16631420 (-) | False | LOC122351188 |
| XR_006251710.1 | lncRNA | upstream | 64716 | 16605367 ~ 16617024 (-) | True | LOC122351188 |
| TU104934 | lncRNA | upstream | 69619 | 16610270 ~ 16610561 (-) | True | G70955 |
| TU104935 | lncRNA | upstream | 72466 | 16613117 ~ 16613424 (-) | True | G70956 |
| TU104958 | lncRNA | upstream | 89835 | 16630486 ~ 16715102 (-) | True | G70967 |
| XM_043248411.1 | mRNA | downstream | 293 | 16526525 ~ 16538075 (-) | True | efhc2 |
| XM_043248026.1 | mRNA | downstream | 22924 | 16509560 ~ 16515444 (-) | True | LOC122351145 |
| XM_043249229.1 | mRNA | downstream | 33441 | 16477543 ~ 16504927 (-) | True | mao |
| XM_043249228.1 | mRNA | downstream | 33468 | 16477543 ~ 16504900 (-) | False | mao |
| XM_043249466.1 | mRNA | downstream | 119594 | 16333185 ~ 16418774 (-) | True | LOC122352003 |
| XM_043248778.1 | mRNA | upstream | 39080 | 16579731 ~ 16584061 (-) | True | dipk2b |
| XM_043248032.1 | mRNA | upstream | 154103 | 16694754 ~ 16698639 (-) | False | slc35a5 |
| XM_043248031.1 | mRNA | upstream | 154103 | 16694754 ~ 16698537 (-) | True | slc35a5 |
| XM_043249387.1 | mRNA | upstream | 180153 | 16720804 ~ 16744816 (-) | False | dcaf6 |
| XM_043249386.1 | mRNA | upstream | 180153 | 16720804 ~ 16744816 (-) | False | dcaf6 |
| TU104521 | other | downstream | 766504 | 15771421 ~ 15771864 (-) | True | G70663 |
| XR_006251733.1 | other | downstream | 1138931 | 15389849 ~ 15399437 (-) | False | tmtc4 |
| TU104362 | other | downstream | 1232393 | 15303103 ~ 15305975 (-) | True | G70549 |
| TU104031 | other | downstream | 2284592 | 14196479 ~ 14253776 (-) | True | G70317 |
| TU103993 | other | downstream | 2598500 | 13938259 ~ 13939868 (-) | True | G70294 |
| TU104983 | other | upstream | 276489 | 16817140 ~ 16823694 (-) | False | G70986 |
| TU104984 | other | upstream | 276489 | 16817140 ~ 16823775 (-) | True | G70986 |
| TU105258 | other | upstream | 695221 | 17235872 ~ 17255491 (-) | True | G71118 |
| XR_006251863.1 | other | upstream | 2029104 | 18569755 ~ 18569882 (-) | True | LOC122352185 |
| TU106113 | other | upstream | 3179847 | 19720498 ~ 19721737 (-) | False | ankar |
