RNA id: XM_043248244.1


Basic Information

Item Value
RNA id XM_043248244.1
length 3120
RNA type mRNA
GC content 0.42
exon number 4
gene id klf5b
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 15001464 ~ 15006670 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGACAGTGTTAcctaatataattttacagcagtaagtcatttttaacagtttttttaaccGTATCCCACCTTTTAGGCCtactaataatgataataataattattatttgattataattatttatttcgtGTTTTGTATTATACAAAATCTTTTTTCGTCACTGCTGCTGGAGTTTTGCGACCGTTTAGGTTACATCTGTGGTTTCCTAAGTATATTTCAcgctgattaatattttaatagctaAAACGTGTTATATCTGAATAGTGATTCAACGGCATATACATCACTAAAACATGTGACACCAAAAACATCTGAATTTGTATGGTAAAGTTCTGGCATTTACGACAGCCAGTTTTAATAATAGgctataaatcttttttttatttattaaagtgcaTTCCCATgcttgttagtttttttttctttggaagaCTATTGCATCTCCTGCAAACCTGTTTGGgtgaattattaaatgtatgatGACAAAGCCCCGCCCCATTTTGAGGCATTGAAACGAGGCAGTTGCGTAATTTGTCTTGTCAAACGCGTAAAGCGCTTGACATCTCGGTCTGGCTGTCGTGTCGTTCTCATTTGCGGCATATTGAATGACGTGATCTCCAGCTTATTTCAGCAGAGGACATGCGGTTATGGGCAACGCTTTGTTGAGCGGGATCCACGGCTAGAATAAAACACCTCTAAGAACTGAACGAGGCATTGAGAGAGGACGATTACAGTGGATTTAATGACACTCCATCAAAGCATCACATTCTGATCAAAAGAGACATGGATGGATACCTGCCGCCTCAGTTTCACACATTGTCAGACCATAAGAAGTTTTGTCAAGACAATTCCCTCACGATGGACCAAGGCACGCCATACAGCATaaacatgaatgtttttttaccGGATGTCACCTACCTACGGACCGGCATGTGTAGACCCGTGAGGTCCGGGGCGCCACAGATAAAGACAGAACCTCTGCATTCGTCTTTCAACTATTCTAGTTGCCACGGCTCGGTTGCGCCCACCATTACGCACCCAGAATACACAAACCTCTACAGCCCAGCTGCGGAAACGGGTAGCAATGTTTACGTCAAGCACGAGCAGCCGTCCCTCGAATTCCCAGACGTTCCACTTTTTCAGCTGTTAAATTCGGAGCTCGAGCCCAATGGTGGCCATCCTTGCACAGATCCCCACAATGCCACATGCCCTCCGATGCCGACGTATAACGGCATTCACACACACCCCGGCCAGATTGCAGAACGACCGCATTGTAATATGAGCAACAGTGGATATTCGCTACCTACCCAGTTTGGTCAGCATTCTCAGAAGAGAGCGGCCTATCTACCACCCTCCCCTCCAAACTCAGAACCCGGCAGCCCAGACAGGAGGAAAGAACTCATACAGAACTTGTCGCCACCTCCGTCCTATGCCGCTAGCATGGCATCTAAAATGGCAGGTCTCAGCCCTGGACCGGCGCTTTCTGTCCAAACGCAAGCAGTACCTGCCCAGTACAACCGCAGAAACAATCCGGATCTCGACAAAAGGAGAATACATCACTGCGATGTACCAGGATGTAAGAAGGTCTACACCAAGTCCTCACATTTGAAGGCCCATTTACGTACTCACACGGGCGAAAAGCCATACAAGTGCTCGTGGGAGGGGTGCGACTGGCGATTTGCCCGCTCTGACGAGCTAACGCGCCACTTCAGGAAGCACACGGGGGCCAAACCTTTCCAGTGCGCCGTATGTAGCCGTTGCTTCTCCCGATCGGACCACCTGGCCCTCCACATGAAAAGACACCAGAACTAGAGCCGCCCGCTCTCGTTGTTCTGACGGTGCCGCGGGAGGGCTATCAGGACCTCTGTTGATGATACTAATTAGGATTTGGGTGTGTTGGTTAATCTTGGGTTTTGGCAGTTCATCAGGTACAACAGGACCAAACCCTGCCGTCGGTACGGCTCCTGTGGTCACAAAACCAGCTAATTGATGAGAACTTGGCTCATTTGCCAGATGGGACattctttttgacatttttgtttgtttctttgtttgtctgCATACTTTGAGGTATGACGTAACTACTTTTAATGTGCCTTTTTTACCTTGTAGAATGGAGATGCCATGTAAAATGTACAACGTTCAAGAACTCGTGGGCAGTTTTAATCTTCTTTAAAGCAATATTCCTGATTTAATACAAGTTAAGACTAATCCACTGATCGCATAATGTTGATCATCATCCATCTTGTGGCAACGTGgttgaaaaattttaaatgttaacgtTTACAAGATTGGCTCCATTGACTTCCGTCGTAACCTAGATTTTGGAAGTTGATATGAATTACGGTAATCAACATTATGCCACATGTTCTGTCAACTGAGCTTAACTTTTACTGAACCCAGAATATTCTTGTAAATGACTACTCATACTTGTATCACAAGGTAAATCATAAAATGCGCTGCAGTTTTGGTTGCAGAACCAAACTGCAGAACAGTCATGAGAATGTGAGCTACAAACGCTGAGTCACAATGAATTAATGTCTCTTAAAAGCAGCACTTGATAAGAAACAGCTTCAGAAATTTGTGTGGGAGCCACCGGttaattagaaaattaaatgtagctTCAGAACACCAAAGAGTTGGACAAAGTCCAAACTATGATATGTTTTGAGGGGATTTGCTTCATGTAGGCAAAATGTTTGAAAGAGCACAATCTGAAGATTGATTGAACTCCTTTATGTtaatttctgtgttttactGAAATGCAATAAGTGGTACAAATCGATTACATATCGATTACTTCCATAGTTGTTTATTTTCCTTACTATGCATTTGGTTGGGATAAGCGATAgctttaaatgtacatataacgtgtatttattttgcacagattatttttttttaatttctattttataaaacGTAACTCGGCGCTTACATGAAATGTGCAATGGGTTGCTGGGAAGTGGTTTTCGAAATCTTTGTTCAAACTAATAGTGCTCTAAATGGCCGCATTATGTGGAACAATGTGGCAGCTGATTGTTTACATTAGTTGGTTTGGCTTATGGTGTGTGTTACATCTGTATGTGTGGCCCCATAAAACCTCTTATTTTCCATTA

Function

GO: NA

KEGG:

id description
K09207 KLF6_7; krueppel-like factor 6/7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU104296 lncRNA downstream 19611 14975412 ~ 14981853 (-) True G70494
XR_006251854.1 lncRNA downstream 58601 14937124 ~ 14942863 (-) True LOC122352110
TU104213 lncRNA downstream 82624 14916800 ~ 14918840 (-) False G70438
TU104214 lncRNA downstream 82624 14916800 ~ 14918840 (-) True G70438
TU104140 lncRNA downstream 406122 14594263 ~ 14595342 (-) True G70396
TU104307 lncRNA upstream 6687 15013357 ~ 15273029 (-) False G70503
XR_006251790.1 lncRNA upstream 28149 15034819 ~ 15040823 (-) True LOC122351681
TU104311 lncRNA upstream 29412 15036082 ~ 15041730 (-) False LOC122351681
TU104306 lncRNA upstream 221626 15228296 ~ 15275841 (-) False G70503
TU104358 lncRNA upstream 250318 15256988 ~ 15260906 (-) False LOC122351294
XM_043249515.1 mRNA downstream 103339 14884111 ~ 14898125 (-) True morc3a
XM_043249516.1 mRNA downstream 107347 14884111 ~ 14894117 (-) False morc3a
XM_043249517.1 mRNA downstream 123808 14875492 ~ 14877656 (-) True vtcn1
XM_043248126.1 mRNA downstream 126772 14868759 ~ 14874692 (-) True trim45
XM_043248895.1 mRNA downstream 139372 14795431 ~ 14862092 (-) False man1a2
XM_043249094.1 mRNA upstream 150434 15157104 ~ 15161278 (-) True gpr18
XM_043249093.1 mRNA upstream 157629 15164299 ~ 15170670 (-) False gpr183a
XM_043249091.1 mRNA upstream 157629 15164299 ~ 15170496 (-) False gpr183a
XM_043249092.1 mRNA upstream 157629 15164299 ~ 15170119 (-) True gpr183a
XM_043248410.1 mRNA upstream 172804 15179474 ~ 15181677 (-) True si:ch211-184m13.4
TU104031 other downstream 747688 14196479 ~ 14253776 (-) True G70317
TU103993 other downstream 1061596 13938259 ~ 13939868 (-) True G70294
TU103924 other downstream 1188137 13807822 ~ 13813327 (-) True G70261
TU103524 other downstream 1505819 13473140 ~ 13495645 (-) False gypc
TU104362 other upstream 296433 15303103 ~ 15305975 (-) True G70549
XR_006251733.1 other upstream 383179 15389849 ~ 15399437 (-) False tmtc4
TU104521 other upstream 764751 15771421 ~ 15771864 (-) True G70663
TU104983 other upstream 1810470 16817140 ~ 16823694 (-) False G70986
TU104984 other upstream 1810470 16817140 ~ 16823775 (-) True G70986

Expression Profile