RNA id: XM_043248286.1


Basic Information

Item Value
RNA id XM_043248286.1
length 2294
RNA type mRNA
GC content 0.42
exon number 2
gene id p2ry8
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 17144856 ~ 17151079 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CAGGTCCGTCCAAAATGCAACGCTGAGGTTTGTATTAATGCATCTGTAAGTTCCCTGatgaaaatgaactcaaaaagtGAATCGTTCATTTCCTAGTTGGATTGGGTGGGACCCCCTCAAGAGTGCTTGTGCTTGGCACGAAGCAAGGTGTGTGCCTTTATTTTACTGGTTTATGTGGCATATTCCCTCCACCACATCCTACCACATCAATTTCACCTTTGCAGGTGCTTAAAAATCCAATTTAAAAAACCATTAAAAGACACGCACCCTTAACGAGAAAGAGAAACTGTGTAAAACAAGCATGACATTAGAGGAACTgtaaattctgttttgtttgtgactTTCATTGAACCGATGAATTCGATGTTACATATTTGATGACGAAACCGTATGTAACCTTAGAAATCTGATACGTTTATGACATTTTGGAAGCATGGAATATGTCTACATTTACAGGTTACATTTGACAAACCTCTAAACGTACTTTATTTTCTTCGAAATGAGCAGTGAGGCGGTGTACTTCCTCTCATGAAGTTTCCTGCGTCTAACAGTCATGCCAGATTAACTGCCGCCAACACACGAGGGAAGTCGCACATGCCTTTTGAGGTGGGAAAACAACCATGATCAACTCGACCAAAATGGACAATGCCACCTTGGCCATGTTTGACAACAAACTGGCCGGTCAAATAGTGTCAGCCATCTATGTCATCGTGACCCTAGCCAACCTGAGCGGTAACGGCATCTCCCTGTTTCTGCTATTGATGCGCACCTCTCCGAAAACCCCCTCCATCATCTTCATGATCAACCTCACCGTCACTGACCTGTTAGTAGGCGCCGTGCTCCCCTTTCAGATCGCCTACCAACTGCAGGGCTACAACTGGACTTTGGGTGAGAGCATGTGCAATGTCCTGACCGTGGTTTTCTTCGTTAACATGTACTGCTCTATTTTATTCATGACTGCTATTAGCGCCGACCGCTACATGGGGATTGTGAAGCCGATGCGCTTCAGagagatgaggaagaggaaaacGTACGCGGTTGTTGCCTGCGTATTCATATGGCTGCTAGTCCTTGCGATTCTGAACCCACTGGAATTCAGAGACTTGACATATAAAGTAACGGAGCGTAATATCACTACGTGTTTTGATGTGTTGAGGAAAGACATGCTTCCGAGCACTGCGCACTGGGCAGGCTTTCTTTTCGGCATGTTCATCGTCCTTTTCCTCTGTCCGTTCATCATAACAGTGTATTGCTACATTAACATCATCTGCGTCCTGGTCAGAAAGAGCAATAGCCAACAGAAAGGCCGTGCTGTGCAGCTGGCGTGCATCGTTCTGTTTGTGTACGTTTTTTGCTTCGCTCCCAATAACATACTACTCTTGGCCCACTCCATCACAAGGCTGTTCTATAACAAGTCTCTCTATATCTACTATAAGCTGACCCTGTCGCTCAGCTGCATTAATAGTTGCATAGAtccgtttatttattatttcgcATCGAAAGAGTTTCGTCGGAAGCTGAGACAAATGCTCAGGCTGCAGACGCTCAGTGCTGCAGAGACGCAAATGATTGAGGGTcacagagaaagctttttctccGGACGTACAACGTGTGACGCAAATGAAGACTGTGACAatttttgaacacatttttgttgttgttgttgtttttcaagacttttcatgttttttttgtagaggaGGGGGGAAACGTCGCGATTCAGATCGGCAGCGGTCACATGAGCATTGTTAAATGAGTCAGAGCACAAGCGCTAACCGCTAGCTCACAGCTCTGACTGACAATTGTTTATAATgatgtatttgtaaatgcaaactCATAGACAGGACCACTtcctatattttgttttcttgttattttttggTAGCATTTAGcttctgttctgttttaatttccTGGCAGAGCAGCTGAGGAAAAGCACGCTGCTCACATGCATTTAGGccatgtgatgttttttttattattagacaaCCAAGTTCCTGCTCACTAAAACTTTGACATATTTGTTGTGTACACTGATGACTCAGCAGCGACTTCAGTGATTTCtggtttgattaaaaaaagcacaaagacTTGTGGCAGctattttagatgttttgtttacctgcaattatttttatactgtaaaatacgCAATTATTGTATGATTagaattcattttcttttctgatCCAAAgtgtttgaatatttattttacttattttgcctgtattattacattataattcatattatgTTTGTTACgatttttttctgtcatataggggcatttattt

Function

GO:

id name namespace
GO:0035589 G protein-coupled purinergic nucleotide receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0045028 G protein-coupled purinergic nucleotide receptor activity molecular_function

KEGG:

id description
K08386 P2RY8; P2Y purinoceptor 8

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU105081 lncRNA downstream 225542 16917224 ~ 16919314 (-) True G71035
TU105039 lncRNA downstream 255427 16886805 ~ 16889429 (-) False cd247l
TU104975 lncRNA downstream 277334 16866492 ~ 16867522 (-) True G70981
TU105028 lncRNA downstream 278434 16866178 ~ 16866422 (-) True G71006
TU105027 lncRNA downstream 279267 16865278 ~ 16865589 (-) True G71005
TU105257 lncRNA upstream 61797 17212876 ~ 17297150 (-) True G71117
TU105275 lncRNA upstream 188041 17339120 ~ 17339530 (-) True G71131
TU105278 lncRNA upstream 189466 17340545 ~ 17340915 (-) True G71134
XR_006251856.1 lncRNA upstream 192637 17343716 ~ 17351712 (-) True LOC122352115
TU105286 lncRNA upstream 213108 17364187 ~ 17368255 (-) False ncam2
XM_043249695.1 mRNA downstream 1499 17137141 ~ 17143357 (-) True asmtl
XM_043249683.1 mRNA downstream 8061 17132470 ~ 17136795 (-) True slc25a6
XM_043249684.1 mRNA downstream 13429 17117017 ~ 17131427 (-) True LOC122352140
XM_043248952.1 mRNA downstream 190507 16939000 ~ 16954349 (-) False ppp2r3b
XM_043248285.1 mRNA upstream 819 17151898 ~ 17161537 (-) False upf3a
XM_043248283.1 mRNA upstream 819 17151898 ~ 17161536 (-) True upf3a
XM_043248284.1 mRNA upstream 819 17151898 ~ 17161533 (-) False upf3a
XM_043248282.1 mRNA upstream 10864 17161943 ~ 17170414 (-) True cdc16
XM_043248292.1 mRNA upstream 19470 17170549 ~ 17175714 (-) False dcun1d2a
TU104984 other downstream 321081 16817140 ~ 16823775 (-) True G70986
TU104983 other downstream 321162 16817140 ~ 16823694 (-) False G70986
TU104521 other downstream 1372992 15771421 ~ 15771864 (-) True G70663
XR_006251733.1 other downstream 1745419 15389849 ~ 15399437 (-) False tmtc4
TU104362 other downstream 1838881 15303103 ~ 15305975 (-) True G70549
TU105258 other upstream 84793 17235872 ~ 17255491 (-) True G71118
XR_006251863.1 other upstream 1418676 18569755 ~ 18569882 (-) True LOC122352185
TU106113 other upstream 2569419 19720498 ~ 19721737 (-) False ankar
TU106134 other upstream 2645178 19796257 ~ 19804599 (-) False glsb
XR_006251780.1 other upstream 2730745 19881824 ~ 19893315 (-) False mfsd6b

Expression Profile