RNA id: XM_043248463.1



Basic Information


Item Value
RNA id XM_043248463.1
length 627
RNA type mRNA
GC content 0.45
exon number 8
gene id LOC122351400
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14205767 ~ 14207351 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATGGAGGCCAAGCGAGTGAAGAGAGATGTTAAAACTCTGCTtgATGAATATATTGGACAGAGACTCAGAGAAACTGGTTTTGATCCAAAGGGAAAAAGCACTTCTACAATGTTAGATGATTTGGCCCATTATGACTTGGCTATAAGTGTGGCTTTGTGGCAGCTCAATAAAGATAATGCAGCTGGGAATGACTACATAGGGATTGGCAGTTTAAGACACATTAGCCAGTACCCTAATCACCTGGAAAGAGAAGCAATGATCCTTTCTTCCTTTGCTGGAATGCTTCTGAACAGCTTACCTATTGAAGACATTCTGTCTCTGTACAATTGCAAGCCAGTGGCGTCCTACCCTCATAATCATGCTAAGGGCAACATTGTTCACCCATTCTCCCTCTCTTATCATCCGTTTGCTATGCTCTATTCATTCAAAGCAGTAGACCACTCAAGAAAACACACCCAGGTACTGAAACGCTGGATCAAGGAACACGGTAAACAGGAGGTCTCTCCAGAGAGACCGGAGCCCTCCACCTCGTCTTCCAGCTCCTCATTTAGTGTGAGTGATAGCGAGGACTCCTTAAAAGATGAAACAGCTCACTATGAGGGCTCGCAAGAATCTCTGCAGGACTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251857.1 lncRNA downstream 16766 14173817 ~ 14189001 (-) True LOC122352120
TU104012 lncRNA downstream 280931 13924616 ~ 13924836 (-) True G70309
TU104011 lncRNA downstream 281663 13923749 ~ 13924104 (-) True G70308
TU103893 lncRNA downstream 310307 13891346 ~ 13895460 (-) False rif1
TU104049 lncRNA upstream 36936 14244287 ~ 14247328 (-) True G70332
TU104075 lncRNA upstream 155688 14363039 ~ 14372674 (-) False LOC122351495
TU104117 lncRNA upstream 269981 14477332 ~ 14562992 (-) True G70382
TU104132 lncRNA upstream 382507 14589858 ~ 14590275 (-) True G70393
TU104140 lncRNA upstream 386912 14594263 ~ 14595342 (-) True G70396
XM_043248147.1 mRNA downstream 535 14204332 ~ 14205232 (-) False LOC122351222
XM_043249210.1 mRNA downstream 2279 14202785 ~ 14203488 (-) True crygm7
XM_043248572.1 mRNA downstream 4103 14200868 ~ 14201664 (-) True si:dkey-57a22.14
XM_043249217.1 mRNA downstream 5702 14199226 ~ 14200065 (-) True crygm6
XM_043249303.1 mRNA downstream 8301 14196704 ~ 14197466 (-) False LOC122351901
XM_043248145.1 mRNA upstream 796 14208147 ~ 14212935 (-) True sgo2
XM_043248299.1 mRNA upstream 68218 14275569 ~ 14277666 (-) True kctd12.1
XM_043249609.1 mRNA upstream 76251 14283602 ~ 14285530 (-) True zgc:162944
XM_043249471.1 mRNA upstream 79936 14287287 ~ 14290228 (-) True txndc9
XM_043249542.1 mRNA upstream 83498 14290849 ~ 14306284 (-) False rev1
TU103993 other downstream 265899 13938259 ~ 13939868 (-) True G70294
TU103924 other downstream 392440 13807822 ~ 13813327 (-) True G70261
TU103524 other downstream 710122 13473140 ~ 13495645 (-) False gypc
TU103526 other downstream 710122 13473140 ~ 13495645 (-) False gypc
TU103179 other downstream 1219789 12985124 ~ 12985978 (-) True G69757
TU104362 other upstream 1095752 15303103 ~ 15305975 (-) True G70549
XR_006251733.1 other upstream 1182498 15389849 ~ 15399437 (-) False tmtc4
TU104521 other upstream 1564070 15771421 ~ 15771864 (-) True G70663
TU104983 other upstream 2609789 16817140 ~ 16823694 (-) False G70986
TU104984 other upstream 2609789 16817140 ~ 16823775 (-) True G70986

Expression Profile