RNA id: XM_043248566.1


Basic Information

Item Value
RNA id XM_043248566.1
length 534
RNA type mRNA
GC content 0.49
exon number 3
gene id crygs4
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14096875 ~ 14097614 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATGACGACTGAGAGCATTGTGTTCTATGAAGACAGGAACTTCCAGGGAAGATCCTATGAATGTAAGGGAGACGCAAGTGAccttcattctttttttatccGATGTAATTCTGCTAAGGTGAAGGGGGGTTTTTGGGTCCTGTATGAGCGGCCAAACTACATGGGCTATCAGTATATCCTGGTCCCAGGGGAGTATCCAGATTATCACCACTGGATTGGCTTCAATGATTGCATCCGATCTTGTCGTCTCCTCAGGCATGTTACTGGACGTGTCAAGCTGAAGCTCTTTGAGAGGCCCAATTTTGATGGCCAAACTTGGGAGGTTACAGAAAGCACCCCATCCATTCAGGAACATTTTCTCTGCAGAGAGATCCATTCCTGCAAGGTCCAAGAAGGTCCCTGCGTGTTCTACGAGCATGCAAACTACCGTGGCCGTCAGTACCTTCTTGAGAAGGGAGAGTACAGGCGACACACTGAATGGGGGGCCATGCATGCCACCGTGGGCTCTATTCGACAGATCACCACAGACTGTTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU104012 lncRNA downstream 172039 13924616 ~ 13924836 (-) True G70309
TU104011 lncRNA downstream 172771 13923749 ~ 13924104 (-) True G70308
TU103897 lncRNA downstream 185022 13881750 ~ 13911853 (-) False rif1
XR_006251857.1 lncRNA upstream 76203 14173817 ~ 14189001 (-) True LOC122352120
TU104049 lncRNA upstream 146673 14244287 ~ 14247328 (-) True G70332
TU104075 lncRNA upstream 265425 14363039 ~ 14372674 (-) False LOC122351495
TU104117 lncRNA upstream 379718 14477332 ~ 14562992 (-) True G70382
TU104132 lncRNA upstream 492244 14589858 ~ 14590275 (-) True G70393
XM_043249448.1 mRNA downstream 2983 14092927 ~ 14093892 (-) True crygs3
XM_043248406.1 mRNA downstream 10104 13985015 ~ 14086771 (-) False LOC122351370
XM_043248407.1 mRNA downstream 23066 13985015 ~ 14073809 (-) False LOC122351370
XM_043248405.1 mRNA downstream 23066 13985015 ~ 14073809 (-) True LOC122351370
XM_043248408.1 mRNA downstream 111713 13974047 ~ 13985162 (-) True etv5a
XM_043249650.1 mRNA upstream 74175 14171789 ~ 14172518 (-) False LOC122352116
XM_043249649.1 mRNA upstream 74175 14171789 ~ 14172518 (-) True LOC122352116
XM_043249256.1 mRNA upstream 91990 14189604 ~ 14190624 (-) True LOC122351874
XM_043249257.1 mRNA upstream 97069 14194683 ~ 14195492 (-) True crygm1
XM_043249303.1 mRNA upstream 99090 14196704 ~ 14197466 (-) False LOC122351901
TU103993 other downstream 157007 13938259 ~ 13939868 (-) True G70294
TU103924 other downstream 283548 13807822 ~ 13813327 (-) True G70261
TU103524 other downstream 601230 13473140 ~ 13495645 (-) False gypc
TU103526 other downstream 601230 13473140 ~ 13495645 (-) False gypc
TU103179 other downstream 1110897 12985124 ~ 12985978 (-) True G69757
TU104031 other upstream 98865 14196479 ~ 14253776 (-) True G70317
TU104362 other upstream 1205489 15303103 ~ 15305975 (-) True G70549
XR_006251733.1 other upstream 1292235 15389849 ~ 15399437 (-) False tmtc4
TU104521 other upstream 1673807 15771421 ~ 15771864 (-) True G70663
TU104983 other upstream 2719526 16817140 ~ 16823694 (-) False G70986