RNA id: XM_043248572.1


Basic Information

Item Value
RNA id XM_043248572.1
length 534
RNA type mRNA
GC content 0.43
exon number 3
gene id si:dkey-57a22.14
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14200868 ~ 14201664 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATGGGGAAGATCATTTTCTATGAAAGCAAGAATTTTGAGGGGAATCAGTATGAATGCAGTGGTGATTGTTCAGATATGCTCTGCTATCTTGGCTGCTGCAACTCCATCATGGTGGAGAGTGGATATTTCATGATCTATGAACAACCACATTACAAAGGCCAGCAATTCCTGGTCCGTAAAGGAGAGTACCCAGACTTTAAAAGCTGGTTGGGCAAAAATGACTGCGTCTGCTCCTGTCGTGAAATCCCAATGACACAGGGATCTTCTCATGAGGTGAAGCTGTTTGAGAGAATGGAGTATGGAGGTCAAATGATGGCTCTATTAGAGGACTGTCCAAATGTCATGGACATGTTCCAAACAAACCACATATTCTCTTGCAAAGTGATTGGTGGAAACTGGCTCTTCTTTGAACAGTCCAACTACAAAGGCAGGATGTACCTCATAAGGCCTGGAGAATACACAAGATTCACTGAATGGGGAGGCTTGAGTGCCTGTGTGGGTTCCATCAAACGAATCGTTGATAACTACAATTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006251857.1 lncRNA downstream 11867 14173817 ~ 14189001 (-) True LOC122352120
TU104012 lncRNA downstream 276032 13924616 ~ 13924836 (-) True G70309
TU104011 lncRNA downstream 276764 13923749 ~ 13924104 (-) True G70308
TU103893 lncRNA downstream 305408 13891346 ~ 13895460 (-) False rif1
TU104049 lncRNA upstream 42623 14244287 ~ 14247328 (-) True G70332
TU104075 lncRNA upstream 161375 14363039 ~ 14372674 (-) False LOC122351495
TU104117 lncRNA upstream 275668 14477332 ~ 14562992 (-) True G70382
TU104132 lncRNA upstream 388194 14589858 ~ 14590275 (-) True G70393
TU104140 lncRNA upstream 392599 14594263 ~ 14595342 (-) True G70396
XM_043249217.1 mRNA downstream 803 14199226 ~ 14200065 (-) True crygm6
XM_043249303.1 mRNA downstream 3402 14196704 ~ 14197466 (-) False LOC122351901
XM_043249302.1 mRNA downstream 3402 14196704 ~ 14197466 (-) True LOC122351901
XM_043249257.1 mRNA downstream 5376 14194683 ~ 14195492 (-) True crygm1
XM_043249256.1 mRNA downstream 10244 14189604 ~ 14190624 (-) True LOC122351874
XM_043249210.1 mRNA upstream 1121 14202785 ~ 14203488 (-) True crygm7
XM_043248146.1 mRNA upstream 2668 14204332 ~ 14208306 (-) True LOC122351222
XM_043248147.1 mRNA upstream 2668 14204332 ~ 14205232 (-) False LOC122351222
XM_043248463.1 mRNA upstream 4103 14205767 ~ 14207351 (-) True LOC122351400
XM_043248145.1 mRNA upstream 6483 14208147 ~ 14212935 (-) True sgo2
TU103993 other downstream 261000 13938259 ~ 13939868 (-) True G70294
TU103924 other downstream 387541 13807822 ~ 13813327 (-) True G70261
TU103524 other downstream 705223 13473140 ~ 13495645 (-) False gypc
TU103526 other downstream 705223 13473140 ~ 13495645 (-) False gypc
TU103179 other downstream 1214890 12985124 ~ 12985978 (-) True G69757
TU104362 other upstream 1101439 15303103 ~ 15305975 (-) True G70549
XR_006251733.1 other upstream 1188185 15389849 ~ 15399437 (-) False tmtc4
TU104521 other upstream 1569757 15771421 ~ 15771864 (-) True G70663
TU104983 other upstream 2615476 16817140 ~ 16823694 (-) False G70986
TU104984 other upstream 2615476 16817140 ~ 16823775 (-) True G70986