RNA id: XM_043248634.1


Basic Information

Item Value
RNA id XM_043248634.1
length 6041
RNA type mRNA
GC content 0.48
exon number 23
gene id osbpl6
representative False

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 4720555 ~ 4772214 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCCGGACTTTACCGCAGACCGCAGTCACCGTTACCGCAGCATCCGTCTAAACTGCCTTCAAATCCAGCCGTACACAGCACTTTTCCTCACTTTCTTCACCTAATACACCAAACCTTGACGTTCTCCTCCAACACGCCAGTGGTTACCCGCGGGGACCGACCGCTGGACCGAGCGGGATAAAGCCCTTTCTCTGCGACCAACGGCTTCGCTATTTCTCAGCATCGGGTTTCTGCGCCAAGAAATGATGTGGACACGAACCGCTGgtgaaaGTGCTCAATAGTTTGGCTGCGCAAGGATTCACTGGTCATGCTTTGCTTCGGAGGGACAAGAAGAGACGCTAAATAAGAAAGGACGAGAGATTTGAGAGACGAGAAGTTAGATAGCAGCCGTTATCATGTCTCGCCATCAAAGCCGAGCCACCAGCCTGGAGGAGAAGGGAGCCACGCCCATCCACAAGAGCTCCACCCCCTCACACAAGAGCTCCACCCCCACTCACAAGAGcgcctcctcttcctcttcatctcAGAGAGACAGTCGACAGGAGACGGATAGTTGGGAAATCATCGAGGGACTAAGGATTGGACAAACTCATGTGCAGAGGCCAGAGAAACACGAAGGCTTCATGCTGAAGAAGAGGAAATGGCCTCTGAAGGGCTGGCACAAGCGGTTTTTCGTTTTAGATAACGGGATCCTGAAGTACTCCAAATCTCCTGTAGATattCAGAAAGGAAAGCTTCATGGCAGTATAGATGTGGGTCTGTCTGTGATGTCTATCAAGAAAAGAGCTCGCCGTATAGATCTGGACACAGAAGAGCACATTTACCATCTGAAGGTGAAGTCTCCAGATGTTTTTGACATCTGGGTGTGCAAGCTGCGCCACCATCGTTTGTTCCGTCAGAACGAGATTGTTCGCTCTCCTCGGGATGCCACGTTACGGACCTTCCCTCCGTCTGCCAGCGCAGAGTCACCCCAGAACACCCCTTCCAGCGCGCACCAAAACAAGCAGGGTAAACCCAGTAGTCTGCCCTGGCAGCTGCCACCATCCTGTAGTAATGGACAGAGTAAAGTGGCAGCCTGGTTAAAAGAGTCAGAGGAGATGGATAAATGTGCAGAAGaACTTGCCTACTGCCAGTCTAGTCTTTTAGAATTGAGCCAACTGCTGCAAAGTCTAGAGATCTTACAAAGGACACAGTCAGCTCCTAACTTCACCGACATGCAGAGTAACTGTGTAGatttgacaaagaaagaaaagcgaGGCAGCAGAAGATGGAGGACTAAAAGTGTCAGCAAAGATGCAAAATTGCAACAGCAGGTTCCCCTGAGTGCAAGTATGTCTCAAGTGCGTCTCCACTCCTCTAATCCTAACCTATGTGCGGAGCTGGCTGATTTTCAAACCCCGGTCACACGTCTGACTGACAGTATTGACAGCGCCAGCGACTACATCAAACTGCAGGAAGATTTCTGCATAATTGCACAAAAAGTGCACTCTCTTCTGAAGTCCGCCTTCAACACTGTGGCcatagagaaagagaagatTAAACAGGTGTTGTTGGAACAGGAGCAGACCGGCCAATCAAATCAGATTGTAACCCTCCGCCGCTCCCTATCACAGGCCTTGTCCcagaatgctgagctgaagacCCGTCTGAACCGGATCCACTCCGAGTCGGTTCTGTCCGATCAGGTCGTCAGTGTGAACATCATCAGCAGTCCTGACGAGGCTGGCGATCCGCTCCACGCGGGCATCCCTCTCTCTCAGCAGGTGTCCAATGAGAGCAGGCTCTCCATGTCAGAGTCTGTGTCGGAGTTCTTCGATGCTCAAGAGGTGCTTCTGTCCGCCAGTTCATCAGAGAATGAGgcctCTGATGACGAGTCTTACGTCAGCGATGTGAGCGATAACATTTCAGAGGACAACGCCAGCGTCACAGATAACGTTTCCAGACAGATGCCTAATGGGGATCTGGCCAGTGGTGCGTTTCGTAACGGCAGACGTACGTGTCTCCCTGCTCCCGCGCCTGACACTTCCAACATTAACCTCTGGAACATCCTGAAGAACAACATCGGGAAAGACCTGTCGAAAGTGTCCATGCCAGTGGAGCTGAACGAGCCCCTGAACACACTGCAGCACATGTGTGAGGAGCTGGAGTACACAGAGCTCCTGGATAAAGCAGCTCAAACCGACGACCCCTATGAACGCATGgcAATCGTTGCAGCGTTTGCAGTTTCAGGATACTCCTCCACTTATTACAGAGCGGGCAGTAAACCCTTTAACCCCCTTCTGGGGGAAACATATGAATGTATCCGTGAGGACAAAGGATTCTGCTTCTTTTCTGAACAGgTGAGCCATCATCCGCCCATCTCCGCTTGTCACTGTGAGTCACAGAACTTCACCTTCTGGCAAGacgtCAGATGGAAGAATAAGTTTTGGGGGAAATCTATGGAGATTCTTCCCATCGGAACAGTGAATGTCATGCTGCCCAGTTATGGTGATCACTATGAGTGGAACAAGGTGACGACGTGCATCCACAACATTCTGAGCGGGAGGCGATGGATCGAACATTACGGCGAGGTCACGATCAGAAACACCCGCAACACTACGTGCATCTGCAAGCTCACCTTTGTTAAGggaAACTACTGGAGCTCGAATGTGAATGAGGTGCAAGGATCAGTGATGGACCAGGAGGGAAAAGTCATTCACAGGCTGTTTGGGAAATGGCATGAGGGTCTATACTGTGGAGTCCCACCTTCAGCCAAATGCATCTGGAGACCAGGGTCTATGCCTACAGATTATGAGCTGTACTACGGCTTCAGCAGGTTTGCTATAGAGCTCAATGAGCTCTGCCCTGAGCTGAAGGAGCTGCTGCCACCAACAGATGCTCGATTCAGGCCGGACCAGAGGTATCTGGAGGAAGGAAATGTCCAGATGGCATCAGCTGAGAAACAAAGAATAGAAGAGCAGCAGAGAAACAGGAGGAAGTGGCTGGAGGAGAACAACATCAAATACCAGCCGCGATTCTTTAAGAAGGTTATGGACAGCAACCAGAGGGAGAGATGGGTGTCTAACAACACATACTGGGAACTGCGCAAGGACCCTGGCTTCCTCAAACTAGAAAACCCTCAGCTGTGGTAGATCCAGATACCTGCGCTGATGACGCCTTCACTGCTGACTGCAGATGCTTACTATGCAGAACAGGAGCAGCCTGGGACTTCCCTCTAGATTTGGATTTTATCTCCAGAAGCggactgaagaaaaaaaaagaaaagaaacgaaCACTCTCTCCTCATCACTTCGGCAGGCTCCGCCTCCATAGCCTCCCTCTCCATAGTAACAGAGAGACGGCGCTGTTGTCAGGGCAGAAGTGAGAGCCGTAGAGCTGTCCACATGAAGCCGGACGCGCTTCCTGTGAAGTCTTTGCCTTAAGAAGTCGCTTCTCAACAACACCGTTTTACGCTTTTAGTGAAATTCCCTCAACTTCTAGGTTTAGATGGACCGAATTTGCTCTTGGTTACATTCTGCATGTGTAGATGGCAGCTTTCATCGGCAATATGCTACACGAACCCATCGATTTAGACAGTTTTAGTGGTATTTTTGTAAACGAACGAAGGAAGGGAACTGCTTCGGCAGCCGACTCAATCTGTCCCTCCTCACGTGATGGTTTTATAATCGCGCGCCTCCACCTTTCAAACCCTTCCAAAGAATCAAGGCTAAAAGAGAGTTCCTGGAGCCAACCTGCAACACTGTGCAGCAAGACCACGAAAGACGCCCCGGGACTCTCAGGCTCCTGTATCTCTGTAGCTGCAACTGTACATTAGCGCTCTTAATTTAAAGCAGACGTTGTGACATTTACGCTCCTGCAATTGCACCGAATCAAATTCAAGAAATTGCTCTTTTTCCAAACAGGTTCTACAAGCACTCGCCACCTTCGGAAAAACTAGTCAGTGCCCAGCGAAACTTATTACAGGTAGTTTTCGCCCCTTGTTTGAGCCAGAAGTCAGCcgcatttaaagggatagttcacccaaaatgaaaaacctgTTACTTTGCTCTGCTCACCCCATCAACCCGTAAGACTCCAAACACAGCATTTCTAATAAACCTGAGCGGTTTCTGTCTTTCCGTTGACAGCTGGAGTTAACCAAAACTGTAAGTCGTTGTAAAACGAGCTTCCATGTTTACCATACTTGATGTGCTCTGTGTATAATATCACTGTTtagatgtaaataaaagtaaaaaaaaaacaatcagtttGTTGGCCATATCTCTTCTAAAGATTAAAATGCTCGAAAGATTTAGGacacttttttgggggggatcTTTTTAAGTTTTGGTCACCTTGACTTTCAATGTAAGGAAGAAAACCTCTcagattttgttaaaaaatatcttcGGTTGTGTTTCAAAAATTACCCGAattcttacgggtttggaacgagcGTATGATGGCAGAATtgtcttttttgggtgaactgtcccttcaAAACGCAGCGGCAGCCAGCGGACATGTACAACGCGCACGTGTACGCCGTGTTTTCACGACAAGAGCGTCCTCTGCTGGCCTCTCAGTGCTACTGCATACTACACACTTCAGTGCCCTACACCTCTGTGCAGCGTGTGGAAAGGAAAGCTGACCATTTCTTGCAGCGTGCTACATTCTCACATGACCTCGCTATATGTTTAATTCAGCAAAATCCAGATTTCAACTTGGACGAAAAACTTTAGGCTAAAAAAATCTAGGTTAATCTGTTGGAAATGGACAGTGAAGTCGAGcgtggtgcattgtgggatacatcCTTCGGCGTATACTGCAAATGCAAATTTTGAACTGCACCCTGCCATACTATTTCTGGCGCACGAAGTAGTATGAACTCAAATGAATCGTCCAGATATACTAAAAAATATGTCGCTGAAGTATAGCATACTGCCAAATACCGATTCTGTATATActtaaacatcatttttatttcctagATAAGACTTCTTGAATTAAACATACTGAGATCAATCATGTGACAACATGTAGAAGAATACATTTGCACGGTGCATTATGTTTGCCGTACTATTTTAAAACAGGCGGTGTAGTATGCAGTACGTAGTACACTAGTATTCTAGTGCAAAGTGGCATCGTGTTTCTAACTGGACCTCATTCATCAAACACAAAATCAGTCGTAAAATCGTTCTCGTGTATTTTGTTGAATTTGCTTGATctgttttgctttctttaaatTGAGATCCTAGACAgctttaaaggtttttatttaatgtgagtGGATTAGAAAAGAAACAGTAGAATGTCAGTAGATGTAAAAAGCCAAAAACAGTGTAGTCACAGTGACAGAGATGATCTCTGCCATTAGTAGACCTGTAAGTCACTGTTTGAGTCCTTCACTGTGCCTTAACGCATATCAACCATATCGACGCACTCTACTGAGCACAGTCCATCCTCAGCATCCCTCATCTTCTGCACACTGACGCACTTTCCTCCAGAGAGCCCAAACACACTTCAAAACACCGCCTGACGGACACAAACAAGGAAGCCTGCGTCTACAAAACCGCATACCGAGTTCTCATACTGCAGATAATTACGTTTTTGGAGACGTCTTCGTCCACACACCGAGAGCTGACCCGTTTCTGAAGCGTACAGGGAAGATGATTTCAGACGCATCTAGCCTAAGACGAGAAGATAGAGCAGGTGGAGCTCCTCGTGGGGAAAGGCGCCGTAGTGAGCGCATCCGCCGTTAGTTTCTCACCACTGCATGAAAACACGTCACAGCCTGCCAATGATCTCCGATGCCTTATCGAAATGTCCGTTTAATTTCTGCCTCGTCAGATCCTCACCGAGACGCCCTGCACCGTGTGCGGGGGTTTTATTCATGTGTTCAGCTGAAGAAGTGCAATTGTACGAcgacatctctctctctgttcgcAGCTGCTCCAGCGCTCCACTGCTGTGCGACTCCCGACGTGTCATTAGGACACTCTCCAGACCCGCTGTCTCACCTTTAAATTCATAGtaagaaatacatatttatgttcGAAGTCA

Function

GO:

id name namespace
GO:0006869 lipid transport biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU100192 lncRNA upstream 35374 4677450 ~ 4685181 (+) True G67752
TU100157 lncRNA upstream 145030 4572676 ~ 4575525 (+) False LOC122351246
XR_006251713.1 lncRNA upstream 145119 4572574 ~ 4575436 (+) True LOC122351246
TU100155 lncRNA upstream 145125 4572676 ~ 4575430 (+) False LOC122351246
TU100146 lncRNA upstream 161527 4523286 ~ 4559028 (+) False G67717
TU100248 lncRNA downstream 6143 4778357 ~ 4780535 (+) True G67769
TU100273 lncRNA downstream 51212 4823426 ~ 4823776 (+) True G67782
TU100322 lncRNA downstream 97971 4870185 ~ 4870882 (+) True G67812
TU100349 lncRNA downstream 127271 4899485 ~ 4954081 (+) True G67826
TU100348 lncRNA downstream 143045 4915259 ~ 4954081 (+) False G67826
XM_043249767.1 mRNA upstream 3643 4709053 ~ 4716912 (+) False rbm45
XM_043248346.1 mRNA upstream 14418 4702686 ~ 4706137 (+) True si:ch211-222f23.6
XM_043249604.1 mRNA upstream 109577 4576182 ~ 4610978 (+) True agps
XM_043249762.1 mRNA upstream 164806 4547501 ~ 4555749 (+) True hnrnpa3
XM_043248584.1 mRNA downstream 53164 4825378 ~ 4829866 (+) True cmklr2
XM_043248519.1 mRNA downstream 68724 4840938 ~ 4853139 (+) True LOC122351440
XM_043248093.1 mRNA downstream 220099 4992313 ~ 5006592 (+) False LOC122351196
XM_043248090.1 mRNA downstream 222392 4994606 ~ 5006592 (+) False LOC122351196
XM_043248088.1 mRNA downstream 222393 4994607 ~ 5006592 (+) False LOC122351196
XR_006251862.1 other upstream 3322 4709053 ~ 4717233 (+) True rbm45
TU100144 other upstream 157953 4557143 ~ 4562602 (+) True G67717
TU100101 other upstream 307413 4410876 ~ 4413142 (+) False hoxd4a
TU100018 other upstream 498384 4141054 ~ 4222171 (+) True G67630
TU100423 other downstream 243419 5015633 ~ 5018338 (+) True c9h2orf76
TU100453 other downstream 367999 5140213 ~ 5142152 (+) False ndufb3
unassigned_transcript_1318 other downstream 633015 5405229 ~ 5405301 (+) True trnar-ccu_4
unassigned_transcript_1319 other downstream 633689 5405903 ~ 5405975 (+) True trnar-ccu_5
unassigned_transcript_1320 other downstream 635262 5407476 ~ 5407548 (+) True trnar-ccu_6

Expression Profile