RNA id: XM_043248791.1


Basic Information

Item Value
RNA id XM_043248791.1
length 2611
RNA type mRNA
GC content 0.51
exon number 8
gene id mfsd6b
representative False

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 19881550 ~ 19893315 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AATGACATCAGTGGAAACGGAGGCAGTGCCACACGAACACACTGCCGCTGCGCACATCGCAGGCAGGTGAGACACTGACGTCGGGTCGGATGTAGACGGCCGTACAATAAACCCGCTCCTTTGCTCTGCCGGGATACATCGCTGCGTGAGGATTGCTCGTAGAAAGTGAGCGAAAATTCAGGATGGTGATAAAATGATGGTTGGACCGAGAGAGCAGTCCGTTGAAGGGATCGTCCTCCTTCAACGCCAGACGGTGAAATAACAAACTTCCACGCAACAACCGGAAATGGCGAGTGATCGGGTGGCCATCCTTACGGATGATGAGGAAGACCAGAAGAGGAAATATGTTCTGTCTGAACCATTTAACACTCTGTCCCTGGGGCAGGTGGCAAACACTACACCATCCGGTCAAACCGGACCGCCTGCCCCCACTGACACACTCCCTTCTCAGCCCTCTCAGAATATGGACTGCACAGAGAGGTGCTGTGCGCGAATAGACAATCATCTCTTGATTTCCAAGGTCTTTTACTTCTTCTTTTACTCCGCATATGGCTCTTTACACCCCCTTCTTGCTGTGTACTACAAGCAGCTGGGAATGACACCGAGCCAAAGTGGCCTGCTAGTCGGGATCCGTTATTTTATAGAGTTCTGCAGTGCGCCTTTCTGGGGAGTAGTGGCGGACCGCTTCAAGAAAGGGAAGGTGGTGTTGCTGTTTTCTGTACTCTGCTGGGTGGTCTTTAACTGCGGTATCGGCTTTGTCAAGCCAGCAGCTATGACCTGTATCAGTAAGGACCCTACTGCTGTGACACCAAGCAATTTTACAAACTATACGCAAGCTGGTAATCGTACCAGACAAAGAAGATACTTGATTGAGGATATGTACTCTGCTCAACTTTCTCAGCCAATATTAGCAGAACATGGACCTCACTTTAGATACATTCGAAGTGCAAATGTAAATACCACAAGCACTCCCTCTGGAAACCCCACAGAGAGTCCTGTCAGCATTGCCATGCCGTCTAACTCGACAATGGCGTCGCCCCGTGCCTCGACGGCCACGTCTAAATCTACCTCGACAACTGAAACACAAGCTACCACTGCCAAACTCAAAGAGTATTTCATAGTCTTTAATAAGGACCAAGTAGATACTATATTTCTCTTGATCCTCTTGGTCATTATCATAGGTGAGTTCTTCAGCGCCCCGGCTGTGACCATCGTAGATACCGTCACTCTTCAGTACTTGGGACAACACAGAGATCGTTATGGACTTCAGAGGATGTGGGGATCTCTGGGATGGGGTATCGCGATGCTGTCAGTGGGTATTTGGATCGACCACACGCACATCACAATCTTCATCCAGGGCTCGGGGTGTGATCCCCCCATCTATAAAAATTACCAAATTGCGTTTATAGTTTTTGGAGTCCTGATGACCTCAGCGCTGATAGTGGCAACTCAGTTCCACTTTGACAACAGGGTTTATCAGGCAGATGAGGAAGAGGACAAGAAGGAGGATGTGGAAATTCCTCAAGTTGTTCAGGAAGTCTCATCTCCAGAGTCCAGCCCAGATGATGCACCCGTCTGCCCAGAAAGCAACTCGCAGCCTTTTCCCTTCAAAGATCTTTTTCGGATAATTTGTGGCGTCCGCTATGGTACAGTTCTGTTTGTGGCCTGGTTCATGGGGTTTGGTTACGGTTTCGTGTTCACCTTCCTCTACTGGCATTTGGAGGACCTCAAGGGCACCACCACTCTCTTTGGCATCTGCTCAGTGCTCAGTCACGTGTCTGAGCTGGCCGCTTATTTCATCAGCCACAAACTCATTGAGCTTGTCGGACACATCAGagtccTTTATATTGGACTGGCCTGTAACACTGCACGCTATCTGTACATCTCCTACCTGGAGAATGCTTGGATAGTTTTACCCATGGAGGTGCTTCAAGGTTTGACGCATGCGTCAGTGTGGGCGGCGTGCATCTCGTATTTGAGCGCTGCTGTTCCTCCAGCTCTGCGCACGTCGGCTCAGGGGATCCTGCAGGGGCTGCACCTGGGTCTGGGCAGAGGCTGCGGAGCCATGCTCGGAGGGGTTTTTGTCAACTTCTTCGGTGCCGCAGAAACCTTCAGAGGCCTCGGAATGGCCTCTCTGGTCACATTAATCATCTTCTCTCTGATACAGTGGCTGTTAGGTCAGAACGAGGAGAAAAAGGGCTCGATGTTGGCTGAAAACATCCCAGTTCCCTCCAGCCCAGTGCCCATCGCCACTATTGACTTAGTTCAGAACCAATCCTCATCTCGGCCAAACCCTGAATCCAAGACTCCAAAGAAAACCAGGCAtcaagaagaacaagaagatcCCAACAAACCCGCCTGGGTGGTCTCTGCCTCCCCCTGGGTCACCATCGCTTTTGCCCTCTGTCAGATCAGAGATATGGTGGCTTTGTCAAAGAACGGCCCCTGTGGTGAAATTCAAGCCCCGCAGGGGAAAGGAGACAAATGAGCAAACCTCAGTGACGCCATCTGCTGATGAATCCACATCCTCGCAAGCCGATACATTAAGTCCAGCGGAGTACCTCTCCCAAGGACCCACAACAAGTGCATTCATTCCTCAAAACTCACACCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU106145 lncRNA downstream 29236 19848339 ~ 19852587 (-) False nab1b
TU106138 lncRNA downstream 71700 19807866 ~ 19810123 (-) False glsb
TU106135 lncRNA downstream 74736 19799612 ~ 19807087 (-) True glsb
TU106191 lncRNA upstream 22885 19916199 ~ 19922691 (-) True G71732
TU106551 lncRNA upstream 269809 20163123 ~ 20168604 (-) True G71912
TU106568 lncRNA upstream 322106 20215420 ~ 20218047 (-) True G71919
TU106549 lncRNA upstream 377744 20271058 ~ 20602822 (-) False G71912
XR_006251770.1 lncRNA upstream 403616 20296930 ~ 20302428 (-) True LOC122351563
XM_043248999.1 mRNA downstream 29198 19833920 ~ 19852625 (-) True nab1b
XM_043248998.1 mRNA downstream 52348 19796252 ~ 19829475 (-) False glsb
XM_043249391.1 mRNA downstream 115030 19750542 ~ 19766793 (-) True wdr75
XM_043249392.1 mRNA downstream 115036 19750542 ~ 19766787 (-) False wdr75
XM_043249549.1 mRNA downstream 144612 19736033 ~ 19737211 (-) True LOC122352057
XM_043248317.1 mRNA upstream 104161 19997475 ~ 20029805 (-) False obsl1b
XM_043248319.1 mRNA upstream 104161 19997475 ~ 20029805 (-) False obsl1b
XM_043248318.1 mRNA upstream 104161 19997475 ~ 20029805 (-) False obsl1b
XM_043248315.1 mRNA upstream 104161 19997475 ~ 20029805 (-) True obsl1b
XM_043248320.1 mRNA upstream 104161 19997475 ~ 20029804 (-) False obsl1b
TU106134 other downstream 77224 19796257 ~ 19804599 (-) False glsb
TU106113 other downstream 160086 19720498 ~ 19721737 (-) False ankar
XR_006251863.1 other downstream 1311941 18569755 ~ 18569882 (-) True LOC122352185
TU105258 other downstream 2626332 17235872 ~ 17255491 (-) True G71118
TU104984 other downstream 3058048 16817140 ~ 16823775 (-) True G70986
TU106614 other upstream 595850 20489164 ~ 20503890 (-) False G71938
TU106615 other upstream 595850 20489164 ~ 20503890 (-) True G71938
TU107092 other upstream 1815974 21709288 ~ 21726820 (-) True G72363
XR_006251764.1 other upstream 2278149 22171463 ~ 22223667 (-) False cerkl
TU107316 other upstream 2405858 22299172 ~ 22307013 (-) False LOC122351746

Expression Profile