RNA id: XM_043248852.1


Basic Information

Item Value
RNA id XM_043248852.1
length 1471
RNA type mRNA
GC content 0.47
exon number 2
gene id dnajc28
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 17649975 ~ 17652121 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTCCCAGCATTCTGTTCGACGTTAATATATAACAACAAACCCCAGTGAACGTTCAAAACGGTGTCattcaaaacacaaagacatGCTGACCTAACTCACTCTGCAGTGGAAATATCCGAGCTGTATCAGTGAGGTTCCAGTTTCATATAGGCACAATGAGCTGCTGGATGTTGTTACAGTTGCACGGCGGGGACCTTCGCAGATCTCTTCTGCCTCTGTGCTGTTCCTTCAGTCTACGAGCTCTCAGCTCCAGGGCTATCAGCCGCAGCTTGAGAGAGAGTTACCGTATTCTGCAGCTGCCTGATGATGGAGCCAGCAACGCTGCAGAGGTCAAGGAGGCTTACCTACACATGGCCAAGCTCTACCATCCAGATTCAGGCGCACCCACAGCAGATGCAGCTCTATTCTCTCAGATAGAGGAGGCCTATCGGGCTATACTAGCCCACCTTGCCCGGCAGAAGTCAGCCTCACAGTATACCCAATCgatggaggaagaagaggaagataaaattaaaagtaatgcCCCTCAACACAGACATTACCTCAGTTTTGAAGGCATTGGTTTTGGCACTCCAAGCCAAAGAGAACGACAGTACCGACAGTTTCGTGTAGACCGCGCCACCGACCAGGTCCTGGAGTATCGCCAAAAGGAGATGGAGAAAGCAGCAGCAGATGAAGGAGCCATGGTGACCCGAGATGCACGTTTGCGCAGCAAGCAGATCAAAATCACTCAGGCGGTGGAGAGGCTTGTTGAGGACCTCATACAGGAGTCGATGGCTCGTGGAGACTTCCAAAACCTTAGTGGCACTGGCAAACCGCTCAACAAGTTTGATTACAACCCGTACATGGACCCCATGACGCACAACCTCAACAGAATCCTCATCGACAACGGTTACCAGCCTGAGTGGATCGTGGCTCATAAGGAGATCAGGGAAACCATTGCTAAAATGAGGGCAAGGTTGCAGGAGATCAGGGCCAGGCTGGGAGAACCCATGAGACACTCAGAATCCCTCCAGTGGAAGGAGCACTGCGCTGTGTTTGCTGACGAACTGGGGAAACTCAACAAGAAAGTGGACAGTTTCAACCTGATTGTGCCTCTCTTGAGCAGACAGATGGTGCATTACAGCCTGAAGAGAGAGCTGGAGAAAATACTGAAAACTGATCAGCTGCTCAGGcaggagaaggagagagagaaagaaaggaagcaAAAGGAGCAGATGGAGACAGCGAGAACATCTCAGAACACCAGACAAGGACTCATCACATGGATGCAGAATCTTCTTAAATGAGGCGGCTTTAAAATGCAGAGTTGTATTTCGCCTGTTTGCCTATTATTAGTGCAATTTAAGATTATGTTGGccttgcttgttttttattatatctgtaATACACTATGAAacaattatttagttttatttaaaactaccAACAAATTATAGGCAATGATAAATAAACCAATCATGTTGatgta

Function

GO: NA

KEGG:

id description
K19373 DNAJC28; DnaJ homolog subfamily C member 28

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU105330 lncRNA downstream 4055 17644438 ~ 17645920 (-) True G71175
TU105349 lncRNA downstream 6299 17643356 ~ 17643676 (-) True G71187
TU105348 lncRNA downstream 7537 17642203 ~ 17642438 (-) True G71186
TU105347 lncRNA downstream 8688 17641054 ~ 17641287 (-) True G71185
TU105346 lncRNA downstream 9572 17640179 ~ 17640403 (-) True G71184
TU105352 lncRNA upstream 9095 17661216 ~ 17661445 (-) True G71190
TU105360 lncRNA upstream 13398 17665519 ~ 17692820 (-) True G71194
XR_006251849.1 lncRNA upstream 81082 17733203 ~ 17735919 (-) False LOC122352098
XR_006251848.1 lncRNA upstream 81082 17733203 ~ 17735919 (-) True LOC122352098
TU105518 lncRNA upstream 570193 18222314 ~ 18226787 (-) True G71293
XM_043248995.1 mRNA downstream 75601 17559528 ~ 17574374 (-) True zp2l1
XM_043248036.1 mRNA downstream 128415 17373161 ~ 17521560 (-) False ncam2
XM_043248035.1 mRNA downstream 128416 17364193 ~ 17521559 (-) False ncam2
XM_043248033.1 mRNA downstream 128416 17364193 ~ 17521559 (-) True ncam2
XM_043248528.1 mRNA downstream 334157 17299245 ~ 17315818 (-) True appb
XM_043249540.1 mRNA upstream 376233 18028354 ~ 18038668 (-) True ralba
XM_043249405.1 mRNA upstream 545005 18197126 ~ 18205461 (-) True hspbap1
XM_043248996.1 mRNA upstream 599115 18251236 ~ 18366267 (-) True sema5ba
XM_043249266.1 mRNA upstream 774951 18427072 ~ 18492873 (-) True adcy5
XM_043249267.1 mRNA upstream 774951 18427072 ~ 18492869 (-) False adcy5
TU105258 other downstream 394484 17235872 ~ 17255491 (-) True G71118
TU104984 other downstream 826200 16817140 ~ 16823775 (-) True G70986
TU104983 other downstream 826281 16817140 ~ 16823694 (-) False G70986
TU104521 other downstream 1878111 15771421 ~ 15771864 (-) True G70663
XR_006251733.1 other downstream 2250538 15389849 ~ 15399437 (-) False tmtc4
XR_006251863.1 other upstream 917634 18569755 ~ 18569882 (-) True LOC122352185
TU106113 other upstream 2068377 19720498 ~ 19721737 (-) False ankar
TU106134 other upstream 2144136 19796257 ~ 19804599 (-) False glsb
XR_006251780.1 other upstream 2229703 19881824 ~ 19893315 (-) False mfsd6b
TU106614 other upstream 2837043 20489164 ~ 20503890 (-) False G71938

Expression Profile