RNA id: XM_043248918.1


Basic Information

Item Value
RNA id XM_043248918.1
length 4004
RNA type mRNA
GC content 0.42
exon number 2
gene id abhd13
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 6492609 ~ 6498204 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGGTTCCGCTGTTTCCGCCCGGAACATCTTAGAAGCGACACCAGTGTACAGCAGCAGTCTGGCTAGATTTGCTGCTAGCCACAGTGGATCAGCTGATATTTCAGGGCATGTTCGTGTAGATGACCGCTTCACCTGCTCGTGAGCTCAGCTCTCTGAAGATGTGCCGCTGAAGAATGCGATAGATATTACGCCTGCAGTGAGTTTGGAGACTCTTGTCATCCCAGTTGTCATGGAGAAGCCATGGAGGTTATGGGGGGCACTGGAGGCGTGCTTGCTGACCATTTGCTCGTGGTCTTGGGGAGTCTGCCGTGTCTCCCTTCTGGCCCTCATTCTGACCTTCCACCTGTACGGAGGCTTCATCCTGCTGGGACTCATCCTGGCCTCTGTGGCCGGCATCCTGTACAAGTTCCAGGACGTGCTGCTCTACTTTCCCGACCAGCCCTCTTCCTCGCGCCTTTACGTTCCAATGCCAACGGGAATTCCCCACGAGAACGTGTTCATCCGCACCAAAGACGGCGTGCGGCTCAACCTCATCCTGCTCCGTTACACCGGCGAAAACCCCGCCGCTGCTCCCACCATTTTATATTTCCACGGCAACGCGGGGAACATTGGACACCGTGTCCCGAACGCGCTGCTCATGCTGGTCAATCTGAAGGCCAACGTGGTACTGGTGGACTACAGAGGCTACGGTAAGAGCGAAGGAGAACCTAGCGAAGAGGGACTGTACCAGGACGCAGAGGCCACTTTGGATTACGTCATGGCCCGGCCGGACATCGACAAAACCAAGGTGGTGTTATTCGGTCGCTCATTGGGTGGAGCGGTGGCCATCCGTCTGGCGTCATGCAACCCGCATCGAGTGGCCGCCATCATGATGGAGAACACTTTCCTGAGCATCCCGCACATGGCGGCCACGctgttctctttctttccaaTGCGTTACCTACCGCTCTGGTGCTACAAGAACAAGTTTCTGTCCTATAGACATGTTGCACTGTGCCGTATGCCGTCTCTCTTCATTTCGGGCTTATCAGACCAACTCATCCCTCCGGTGATGATGAAACAGCTGTATGAGCTGTCGCCGTCTCGGACTAAACGCCTCGCCATCTTTCCCGAGGGTACTCACAATGACACCTGGCAGTGCCAGGGCTATTTTGCCGCCCTAGAGCAGTTCATGAAGGAGCTTCTTAAAAGCCATGCCCGAGAAGAGACGGCCCAGGGGACGTCCAACGTCACCATAATCTAGAACAGTAACTACTACTGACTGCTCTAAATCTGGACCCTCTCAGATAGAATGTACAATTTATtctctatattttattatttccccCCCAACTTCATAAGCTCTTTCTTTCCATTGATCACACACCAACAATTTATTAGTtactatttcatttatttaatagagaagGCGGACGTTTTTTAAgacttcagaatatttttttttgtcagtttttatattaagtatGAATGCATCTGCCTCGAGAATTAAATGCCCTCTGAgtccttttctttattttctgattttgCCCTCAAAAGCATACATAAATCCGTACCACACATGCAAACGTAATTGGAAATCGTTAATTTACAATGGTCGGAACTACTTTCTGAGCTTGAACTGTTGAGTTTATGCGTCAGTTTTAGAGAAGTAGTTTAAAATTCATGAGTTACGTAATAATGTCTGTGGCTTTATTTTACTCATTAAAGACAAACTGCTACTCCAAAATTCCCTAAGCCTACTGAACTAAACAATTTTAATGAACTACTAAACAAATTGAGAAgttatattcttatttatttcgtttatatgtaatatatattcacGCTTTTTTTCCTAATAGAACAGAGggctctaaaatatttttttgcctttttaaattcCAGTGAATACAGTTAAATGGACCAGGGGCAACTGATCCTAGTTCACTCATCTTTGTCTATGGCATTTCATGCATTCAATCTTCTATACCCGGCTGTAATGTGTTGAAGCTTTATTTTATCACACTGCCTTCTTTTTTTACGGAAGGTTTAAAATCCACTCAGGAAATCAGCTCATTGTGGTTTGATCCCATGTTTTGGATTTGCATATGGAGCTGTGTGTGAGTAGTATAGATTTCTATACTGATGTTCATGCGGGCTACAGTTCACTGTGAGCACTGTATGAAAATACCAACACAACAAGACTAAAGTATGTTTACTCTCTCTCAGGCTTAGTGATCTTCTGAAAGTTAGAGTGAAATCGCACATAGCAGCTGCTTGACAGTGTTCCAAGCACAGTCCATTTGCACAACTTGTATATAAGGTCTTTCCTTTctcttaataagatcaaatgcTTAACATCAGATCTTTACCAATGACCTGTTTTTATTTGGATCATGTTGAAAAACCTGCCCATTGGTGACTGTTGCACTGTGTCACACATCCATTTTCTAGCATCTTCCTTTAAAACGCAGAAACATTCACGACAATGTAACGATTAAtcaactcaaaaatgaaaattgccgtcatttactcaccatttaTGCCTTTTCATAACTGCATGGCTTTCTTCAGCGGAAcgaaaaggagatattttgaagagtaCATTGGCCACTCTTTTCCATGCACTTGCAGGTAAAAGCCTCAAGTCTCTTCAAAAGGACTCATTGATAAAAGTTCACAGCCGAGAAGTTTTGCTGTTCGCTAAAACTATTTTCCAATGAGTTGAATCTGTCCTCATTCGTTGTAATTGAAGATCAACCAGCGCTTTCTTTGaaatttctccttttgtgttccacaggaGAAAGAAATCATACAGGTGTGGAAGAGTAAATGCTGGCAAAATGATCATTATTTTGGCATTATTTATTGTATCTAATCAGGTTCGTGTTTCTGTAGTCTCACATTGATGGTTGACCATCAGGCACCCATTAAAAGTGAACGGTGGACTTTGCGAACCTCGACCATTATGTAGTGTTGCATCAATGCACATACAAATCTGTAATTATTGCATGCTTTAGATGCTCAGCACATTTCGTTTAGCTCTGATGCACTTTTACGCTCACGTCTTTTGTAATGCGTGAAAACTGCCTGTGAATTTTAAGATGACAGATTTCAAGGCAGAGTGATCCTATGTCAGTTTGCATGCAGATATTGCTATCTTCAATCCAGAGGTTATATCAGGCTTCCAAAGTCCACCTTTCAGGATTTTAAGGGCTCTTTCGGGCCCCGTCATTCTTAAGGGTGCTTACGAGATTGTATAGTCGCACAGCTGAGCTCTAGATGTCTTCAGTTATGTCTAGTATTATTTATGGTTATTAGTTATGTAGTAACAGGACAGTTGTAATCGAGTAAGAAGTGGAACCAGCCAATGCAAGAGGAAAAAGTTTCTAAGACGTCAGCTTTTGGATGGTTTCTATacataagatattttgtacatcaCTTTATTGaccttttgattttaaaagaaataatctgTAATGGTCATTATTGATCTTATAGGCCCGATTCATAAGAACTGCCTCTAAATCTTATAGgaaatcatttcaaattaaaatgatttgcaatGTGACATTTAGTTGAACTCAAAGTGACGTGCCATGATACCTTATTGAATGTTTGTGTGGTTGAGTGTAAACCTTGAAACAAAGATGCTGaactatgacaaaaaaaataaaaatactacttaAGAGTTTACTAGATTTGACTAACGCACCATTGGCATGTTCTGGCCATTCTCTGGGGCTAGTTTGTATGTTGAAATCTCATTTCATCTTGTTCATAATctgaatatatgaaataatataaagtgctgctcatgttttatatttgctttttacagtaaatagcAGAGCGGAAAGATTCAGTTCTGAATGTGCAAAGGAGGGTTTTCTTATTCTTTCGACATTTGTGTTTTGAGCTATGGATTTTCTATTCGAATCATTTGTTCATGTACATACAGTTGGATCACTCTTTCTATTTTCTGTGTGGTAACATGCAATAAAGAAATCAAACCCTTCTGATAA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K24083 ABHD13; abhydrolase domain-containing protein 13

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU100892 lncRNA downstream 251007 6241322 ~ 6241602 (-) True G68189
XR_006251731.1 lncRNA downstream 349927 6117851 ~ 6142682 (-) True LOC122351301
TU100773 lncRNA downstream 445013 6045115 ~ 6047596 (-) True G68120
TU100695 lncRNA downstream 686282 5805940 ~ 5806327 (-) True G68082
TU100657 lncRNA downstream 756826 5735337 ~ 5735783 (-) True G68055
TU100973 lncRNA upstream 181891 6680095 ~ 6683011 (-) True G68265
TU100974 lncRNA upstream 199482 6697686 ~ 6697893 (-) True G68266
TU100979 lncRNA upstream 217792 6715996 ~ 6718143 (-) True G68270
TU101056 lncRNA upstream 276870 6775074 ~ 6776415 (-) False LOC122351577
XR_006251776.1 lncRNA upstream 277082 6775286 ~ 6776974 (-) True LOC122351577
XM_043248919.1 mRNA downstream 253 6487238 ~ 6492356 (-) True tnfsf13b
XM_043248920.1 mRNA downstream 267 6487238 ~ 6492342 (-) False tnfsf13b
XM_043249183.1 mRNA downstream 15063 6319090 ~ 6477546 (-) False myo16
XM_043249184.1 mRNA downstream 28341 6319090 ~ 6464268 (-) False myo16
XM_043249186.1 mRNA downstream 40461 6322708 ~ 6452148 (-) False myo16
XM_043249750.1 mRNA upstream 3205 6501409 ~ 6599198 (-) True LOC122352171
XM_043248124.1 mRNA upstream 188014 6686218 ~ 6708208 (-) True LOC122351204
XM_043249753.1 mRNA upstream 221550 6719754 ~ 6726798 (-) True si:ch73-390b10.2
XM_043248737.1 mRNA upstream 309125 6807329 ~ 6832254 (-) True tmtops2b
XM_043249722.1 mRNA upstream 385284 6883488 ~ 6888374 (-) True ecrg4a
TU100887 other downstream 231540 6246900 ~ 6261069 (-) True G68188
TU100850 other downstream 392726 6099347 ~ 6099883 (-) False LOC122351979
TU100782 other downstream 448684 6043275 ~ 6043925 (-) True G68124
TU100767 other downstream 569789 5919757 ~ 5922820 (-) False LOC122351463
XR_006251815.1 other downstream 1123020 5349955 ~ 5369589 (-) False LOC122351925
TU101110 other upstream 572781 7070985 ~ 7148620 (-) False LOC122351350
TU101496 other upstream 1516245 8014449 ~ 8018105 (-) False LOC122351623
XR_006251804.1 other upstream 1580932 8079136 ~ 8094847 (-) False als2a
unassigned_transcript_1465 other upstream 1842739 8340943 ~ 8341015 (-) True trnak-uuu_106
TU102057 other upstream 3409984 9908188 ~ 9910178 (-) True LOC122351483

Expression Profile