RNA id: XM_043248954.1


Basic Information

Item Value
RNA id XM_043248954.1
length 4093
RNA type mRNA
GC content 0.43
exon number 7
gene id stk17b
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 13130049 ~ 13137972 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCCTCGCCGCTCGCGCTGGCGTCAGGGCAGAATTTGAAACCGCGGAGCCGGTGGACGGAGAGGCGAATCTACGCATCGAAACCGATTTACCTCAGCATGGACTAGTTAGCCGGACGAGCGCGCTTACTCCACGTTCAGCGTCTTTCAGAGTTTGTTAGGTAGTTTGTCCGCTGTTGTTCCTGAGAGAATAGGAAGACGGTGTCCGTTCTAAACTTTAGTGGAGTGATTTTGTCCTGCGTGAAATACAGCGCTGTCTGTCGGTCGGTCGCTGTGCAGTTTTAACAAAATGAGGCGAATCTCTTTTTTCGTTAGCCTAAATGAAGGACATAGTTTAGTTTCGGAGTTGGAGTTTTGTTAGCGGTATCTTTCAAAGCTAAATGAGCTAATCTGCGCTAGCTGGACGCTCTTAGCATCGGTTATCTTGTTCAAACTCGACTGAACTCATTCAGCTGAAGCAAATTCATTTATTGTCAACTCTTTCTGAATAACCGCGAACTAAACGCTCTTTTCTCCGTTGGCTGCGTGAACACCGCGAAGAGGCCGTTGGcactgggtgtttttttttctttcctggtTGTGAGTCTGATCATGAGCAGAGTGCTGGTTAAGTGATAATAAGCGGTCTGCAGATTGACTGGACACTAGCTGGAGGTGATGGCCCGGAGGAGGCTGGACAGTCGCAGTGGGTCCTCGGCTCTGCTGTCAGAGATCCACACTCACATCCACACGGATCCCCTGGACGCCGTGTTTGACATGAGCAACGAACTGGGCAGGGGGAAGTTTGCAGTGGTGAAGAGATGTGCTGAAAAGGCCACAGGGAAAGTCTTCGCTGCAAAGTTCATCAAGAAGCGGCGGCGAGGTCGCGACTGCAGGGCAGAGGTCATTCATGAGATCGCCGTTTTAGAGGCGGCGAAGAACAACCCTCGTGTGGTGAACCTGCACTCTGTATACGAGACCGATCATGACCTCGTTCTAATGCTGGAATATGCGGCGGGTGGTGAGATATTTGACCACTGTGTGTCTGAGGAGCTGCTGCCAGAAAGTCAGATCACCCGTCTGATCCGACAGATGCTTGAGGGTATTCACCTACTGCACCAGAGCAGCGTGGTCCACCTGGACTTGAAGccCCAGAATATTCTCCTGACGTGTCTGAGCCCAATGGGGGATATAAAGATAGTGGATTTTGGCTTGGCCCGCAGGTTGGGCTCTTCTGGGGAGCTCAGAGAGATTCTGGGAACCCCCGAGTACGTAGCCCCTGAGATCTTGAACTATGAACCAATCACCACAGCAACAGACCTCTGGAGTGTGGGAGTGATTGCCTATATGCTGGTGACAGGAGAGTCTCCCTTCGCTGGCGAGGATAAACAGGAGACCTTTCTAAATGTATCCCAGGTGAACGTGGACTACAGCAGAGAGGCTTTCTCAAGGGTGTCTGAACTGGCTGTCGACTTCATCCGGAAACTGCTGGTCAAAGCACCAGAGGACCGTCCCAGTGCGGCCGATTGCATGACCCATCCCTGGCTGTGGCTTCATTGTACAGGTTCTGATCCGATCCCCGTGACCCCACGCACTCCCCGGGAAAGGAGTTTCGGCGGGAAGTGGTCCGCGCCACCCGAGGATCCCGAGGACAAAGAAAACATTCTGGACTCGCCGCACTCCAAGAGGTTTCGTTTTGAGGAGGACATGTCAGCCGCAGGCGACGGTGACCACTTGTGCTGATCCAAAACGGAAACGCACTTGCACTGAATAGCATTTTTGGCCCTTTTTGTTGGCCCCCACACAGCACCAGCAAACATGCTTCTCCTCTAATGCTGTTTTCAACATCCTTTGGCCAAccaaagatgattttttttttcacaaaagggCTCAGTCTAgtgtaatgttaatattattattattataatagtaagaaTCTAAATATCTATGTTGCTGTCCTGTCTCAAGATGCCTTTTCCTGCCGCCTTTTGgatttttaagttattaatttgaacattttaattgcCATTCAGTATCAGTTTAATTTTCTGCTGATCTTAGCCCATGTTAATCTCACCACTATTTCCATTACTGCACTTAAGGGATTTCCAACAATAAGGGAAAGACGCTCGAGAGCGGCAGggcattcagtgttttttttaaaactgctttaatGAAGGATGAGTGTTTGAGCACACTAAAGAGTCTTCGCTTTTTGTGTCTCAACATCAGAAAGAGTTTGTAAGATTAGACTCTGTTAATTCAAAAACACCTGATGAGATGCTCTGTTATAAAGATTCAGTGCAGGAATGCTCTCGTGTATGGGTGTTGGTTTTGTCTCGCTCCTCTTCTTTCTTGTGGCATTGACACATTAGTGGGCTCCATAAAATGTGACTCAACTCAAACACGCACAACACACCCTGGATTACAcaaatatgtgtttgtattggTCACAGAACTTCCTCCTAGATAATGACTAAAGAAATGCAGGAAAGCACTTAAACCCTCtattatatgtgtttgtgtcactaaaataagagaaaatagtttttaacagCTTTAGATTTAGTAAATCAACtgcatctattttaaaatgattttcgttttaaatatttccttttcaTTGCCAACCTATTgtataataaactattattaagcAACATTCTAGCATTTCCCCCATGGCAGGCGCCTAATATCTCAATGCCTGAGATGGTCTATACATAATCTTCAAATGACAGTTTTTATCTATGCACCAATCTGAGGTAACTCAGGGTTTTTGTTACCTTTTTTGTACAGGTGTTTTTAAGCTAATGCTATTAACTGATGGATGTTTCAGTCTTTGTTCATTCCGAGCCTTGTTCTCAGGGTTAGCTGTAACTGCACAGTTTACCGGTGTATATTTCTCGAGTGCCTTtgggtgcatttttttttttctatgcttGAGCCGAACGACCTGACTGGATCTTCTGTTAAACACATTCATTGCAGCACATTTATATGGATGTAttgttgttaatgtttattCTGTCTTCAGATATGGTACACCCTTTAAACTGATGACCTGTTGtgttttaagaaattatttctACGTGCTTCTGGTCATGGAGATATAAACGTATTCGGTGGGATTTAGAAAGGAAAACAGtgtttaagtaatatttatggTCTTGGATTATGTAGGGCATGAAAAGATGGGTTTTCAAAGCTGATATTGTCGAAATTATATTGTTATGTTCAGATAGTGAAGTATGTTTGGTTGTGATGAAAGTACAGGTTGCGAATTCTGAAATGAAGGCAAATGAATGTTAGAATATTTTGGTGGAAAGTGTAGTAATGCTACAAATACAAGTAGATCAGTTTCAGATTTATTGGTGTTATGTTTTGTTGAGTGGCTGCTAGAACTGGAAATGTTAGTATTGCAGAATTCAGTCTTAAGGTCGAGCCCTTTGGTTATTGTTCTCTGTGTGTAGAGGTGTGAAAAGCTCATGTGTGTTTGCGTGCTCAGGGCCTTACGGTTTCCCAGAGATGTCACCAGTCTGCAATCATAATAGGGCTATTGTCTCCTAAGACGAGAGGCTCTTGTCACGGTCGTGTGCTCACTGTATGCGGTCATCTTAAAGGAAAACTTGAATCTATTCCTTGCCTGGGAAACAGCCTCAATCATGTTTAAGGGCCATGAGGTATTTAAAGCTGGAATTCAAAAGAGAATAGACCAGGCTTTGGAGAGCATTTCTGAACAGTCACTGTGGTATTGCAGAAAGCTTGTGACTAACTTTGTAAGGACACTTAAGGGTTATTATACTTGATTCTCATACTATCTTAGGCAGGTTTAGTGAAAATTGATAACAGAAGATGCTTAATTCAATgatgaaaactgtattttgagTTTTATATGTACCAGAATAAATGTTGCTCAAAGGATTtacaaaaattctaataaagCCATTGACAGTCTGGAGAATGTACCCTAAATATagattttgtatgtttgttaaTTCTCctaacattttcagttttgtttttaaaataagaaaatccCTCATGCAGCgccattgatttatttgaaatttccTAGCTCTGACATGTCAGACTTGAATAAATTCTTATATTTCTGAAA

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08804 STK17; serine/threonine kinase 17

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU103184 lncRNA downstream 92596 13035956 ~ 13037453 (-) True G69762
XR_006251806.1 lncRNA downstream 340915 12787115 ~ 12789134 (-) True LOC122351847
TU103153 lncRNA downstream 356197 12773441 ~ 12773852 (-) True G69738
TU103148 lncRNA downstream 398306 12731041 ~ 12731743 (-) True G69733
TU103090 lncRNA downstream 483047 12645836 ~ 12647002 (-) True G69704
XR_006251825.1 lncRNA upstream 90182 13228154 ~ 13232210 (-) True LOC122351987
TU103357 lncRNA upstream 92895 13230867 ~ 13232202 (-) False LOC122351987
TU103390 lncRNA upstream 164431 13302403 ~ 13327413 (-) True G69888
TU103400 lncRNA upstream 172901 13310873 ~ 13325669 (-) True G69896
TU103479 lncRNA upstream 273840 13411812 ~ 13412439 (-) True G69953
XM_043248427.1 mRNA downstream 11827 13114503 ~ 13118222 (-) False ftcdnl1
XM_043248426.1 mRNA downstream 11848 13114503 ~ 13118201 (-) False ftcdnl1
XM_043248425.1 mRNA downstream 12317 13114503 ~ 13117732 (-) True ftcdnl1
XM_043248428.1 mRNA downstream 12326 13114503 ~ 13117723 (-) False ftcdnl1
XM_043248565.1 mRNA downstream 314911 12814153 ~ 12815138 (-) True LOC122351488
XM_043249646.1 mRNA upstream 1684 13139656 ~ 13158302 (-) True hecw2a
XM_043249136.1 mRNA upstream 22312 13160284 ~ 13173784 (-) True pgap1
XM_043249139.1 mRNA upstream 35947 13173919 ~ 13176534 (-) True maip1
XM_043249133.1 mRNA upstream 41532 13179504 ~ 13211066 (-) False lrrfip1a
XM_043249134.1 mRNA upstream 41532 13179504 ~ 13211065 (-) False lrrfip1a
TU103179 other downstream 144071 12985124 ~ 12985978 (-) True G69757
XR_006251867.1 other downstream 391878 12738044 ~ 12738171 (-) True LOC122352189
TU103144 other downstream 418225 12708631 ~ 12711824 (-) False LOC122351186
TU102995 other downstream 706603 12422429 ~ 12423446 (-) True G69650
XR_006251743.1 other downstream 940393 12166991 ~ 12189656 (-) True gtdc1
TU103524 other upstream 335168 13473140 ~ 13495645 (-) False gypc
TU103526 other upstream 335168 13473140 ~ 13495645 (-) False gypc
TU103924 other upstream 669850 13807822 ~ 13813327 (-) True G70261
TU103993 other upstream 800287 13938259 ~ 13939868 (-) True G70294
TU104031 other upstream 1058507 14196479 ~ 14253776 (-) True G70317

Expression Profile