RNA id: XM_043249050.1


Basic Information

Item Value
RNA id XM_043249050.1
length 1460
RNA type mRNA
GC content 0.47
exon number 8
gene id hao2
representative False

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14614726 ~ 14620909 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTTCAGTCTTTCATGTTAATCAGTGTTTTGGCTGCCAAAGTTAGCTGACTAAAAGTGCTAAAGCAGTCCACTGTGCTGTGACCTAAATTTGTCTAAATCTTCAGAAAAGTGAAGAAGGCGTCTGTGTAGAAATGACTATGGTCTGTTTGACTGATTTTGAGGAATATGCCAAGCAGCACCTCTCAAAGGCTACATGGGACTATTATGAAGCTGGAGCTGATGACTGTTGCACCAGAGATGACAACCTGCTGGCCTATAAACGgATCCGCTTGAGGCCAAGGATTTTACGTGATGTGTCAATGAATGACACTCGAACTTGTGTGCTGGGATCAGAGTTAAGCTTCCCTGTGGGAATTGCTCCCACGGCTTTCCATTGCCTTGCGTGGCATGAGGGAGAACTGGCCACTGCTAGAGCCACTGAGGCAGCGAATACCTGTTATATAGCCAGCACATACTCCACATGTTCAGTGGAGGAGATCGCAGCAGCAGCGCCCAATGGCTACCGTTGGTTCCAGCTGTACTTGTACCGGGACCGTAAGCTTTCGGAGCAGATTGTGCGCAGAGTGGAGGCACTTGGCTACAAAGCTCTGGTGCTTACAGTGGATGTGCCCTACACTGGCAAGCGCCGCAATGACATACGAAACCAGTTTAAGCTCCCACCTCACCTAAAGGTCAAGAACTTTGAAGGAATGTTCCAGGAGCAGGCAAGCTCCCAGGAGGAATACGGGATCCCTGCTAACACACTGGACCCGTCGATCAGCTGGAAGGATGTGTGCTGGCTCCAGTCTCTATCACGTTTGCCTATAATCATCAAGGGCATCCTTACTAAAGAGGATGCAGAGCTGGCCGTAGAGCATGGCGTCCAAGGGATAATTGTGTCTAATCACGGGGGCCGGCAACTGGATGGAGGGCCTGCAACGATAGATTGTCTGCCTGAGATAGTAGACACAGTGCAGGGCCGGGTCGAGGTCTACATGGACGGAGGGATCCGCACAGGCAATGATGTGCTGAAGGCCGTAGCCTTGGGAgctaaatgtgtgtttattggCAGACCAGCAATCTGGGGCCTTGCTTACAAGGGGGAAGAAGGTGTGAGAGAGATCTTACAGATTCTACACGATGAGTTTCGTTTATCTATGGCACTGTCAGGTTGCCGAAATGTTGCTGAGATCAACAGGAACCTTATTCAGTTCTCCAGACTTTGAACAGCAAGAGGACTTTAGTCATTTCTACTTTACCACTGACAGCAAAAGATCCACTACTAATATACTATTAATACTAAATGTGTTCAAGAAACTTGTTGCTTTAAGTGACATTCAGCAACAATTACATATCTACCTATGTTCACAGTGTAATGATGGTTTTAATACAGTATTTGTATTTCAGTAAACATTATGCATGGCACTgcataaattttaaataaaggcaGAATTTTGCCTAAGAGTGAATTATTTTGGTAA

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0010181 FMN binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU104140 lncRNA downstream 19384 14594263 ~ 14595342 (-) True G70396
TU104139 lncRNA downstream 19384 14594424 ~ 14595342 (-) False G70396
TU104132 lncRNA downstream 24451 14589858 ~ 14590275 (-) True G70393
TU104117 lncRNA downstream 51734 14477332 ~ 14562992 (-) True G70382
TU104075 lncRNA downstream 242052 14363039 ~ 14372674 (-) False LOC122351495
TU104213 lncRNA upstream 297749 14916800 ~ 14918840 (-) False G70438
TU104214 lncRNA upstream 297749 14916800 ~ 14918840 (-) True G70438
XR_006251854.1 lncRNA upstream 318073 14937124 ~ 14942863 (-) True LOC122352110
TU104296 lncRNA upstream 356361 14975412 ~ 14981853 (-) True G70494
TU104307 lncRNA upstream 394306 15013357 ~ 15273029 (-) False G70503
XM_043249047.1 mRNA downstream 787 14608083 ~ 14613939 (-) False si:rp71-68n21.9
XM_043249046.1 mRNA downstream 787 14608083 ~ 14613939 (-) True si:rp71-68n21.9
XM_043249048.1 mRNA downstream 7722 14604819 ~ 14607004 (-) True hsd3b1
XM_043249033.1 mRNA downstream 11929 14595394 ~ 14602797 (-) False pla1a
XM_043248482.1 mRNA upstream 130207 14749258 ~ 14758586 (-) False wdr3
XM_043248481.1 mRNA upstream 130207 14749258 ~ 14758209 (-) True wdr3
XM_043248485.1 mRNA upstream 164406 14783457 ~ 14789290 (-) True tent5c
XM_043248895.1 mRNA upstream 176380 14795431 ~ 14862092 (-) False man1a2
XM_043248891.1 mRNA upstream 176380 14795431 ~ 14862092 (-) True man1a2
TU104031 other downstream 360950 14196479 ~ 14253776 (-) True G70317
TU103993 other downstream 674858 13938259 ~ 13939868 (-) True G70294
TU103924 other downstream 801399 13807822 ~ 13813327 (-) True G70261
TU103524 other downstream 1119081 13473140 ~ 13495645 (-) False gypc
TU104362 other upstream 684052 15303103 ~ 15305975 (-) True G70549
XR_006251733.1 other upstream 770798 15389849 ~ 15399437 (-) False tmtc4
TU104521 other upstream 1152370 15771421 ~ 15771864 (-) True G70663
TU104983 other upstream 2198089 16817140 ~ 16823694 (-) False G70986
TU104984 other upstream 2198089 16817140 ~ 16823775 (-) True G70986

Expression Profile