RNA id: XM_043249085.1


Basic Information

Item Value
RNA id XM_043249085.1
length 4597
RNA type mRNA
GC content 0.45
exon number 18
gene id ints6
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 13400252 ~ 13410399 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTCATTTTCAGCTGCCAATCAGATGAAGCGTTTTGACGCACAGCGCTCCGGCGGCGCTCAGGGGGCGGAGTCAAGCGCTGTATGCAGAATAAAACCACTGCAGCCCGCGAGCAGACCTCAGTGTGAGGAGAATCATGGACGTAAACTAAACAGAAAGTTACCATGACAAAAGTTAGGCATTTCTTTCAAATTACAGCAACAACACCCGTTTCCCTTGTAAATCAACAACCTTTTCCCCCCCAGGGTCTGAGGTTTGCTTAAGTTTACAAGGCATCGCTCTTTCTACACTAACTACAGTTACACTCTGACAGAAAGAATGCGCGAGTCAGTTAGCATTAGCCGGCTAGCAGCGTGCTGACAGCAGCGACAGGAGGCGAACAAAAGATTGCTCTGCATTTGTCCGCTTGCACTGACATTCGGTCCATGTAGAAGGGGCGATTACCAACACAATGCCCGTGTTACTTTTCCTGATAGACACGTCCGCCTCCATGAACCAGCGCTCCCATCTGGGCACTAGCTATCTGGACATAGCGAAGGGCGCAGTTGAGACTTTCCTGAAGCTGAGGAGCAGAGATCCGGCCAGCAGGGGAGACAGATACATGTTAGTGAGTTTCGAGGAAACACCGGCTGGAATTAAGGCTGGATGGAAGGACAGTCACGCCACTTTTATGACTGAGCTAAGGAACCTGCAAGCAGTTGGACTGACATCGATTGGCCAGTCTTTAAGGACATCTTTTGATTTGCTCAATCTCAATAGATTAGTTTCTGGGATAGACAACTATGGACAGGGTAGGAACCCTTTCTTCTTGGAGCCTGCAATCATTGTGGCCATAACCGATGGCAGCAAGCTAACCAGCAGTTCTGGTGTACAAGATGAGTTACATTTGCCTCTGACAACACCACTGCCCGGGAGTGAGCTGACCAAAGAGCCCTTCCGATGGGACCAGCGACTCTTCTCTTTAGTGCTCCGCATTCCAGGCAATGCCTCTCCTGACCCTGAGCCAATAGGTGGAGTTCCACTTGACCCATCCCCTATTACGCCCATGTGTGAGGTCACTGGGGGCCGTTCATACAGCGTATTCTCCCAGAGAATGCTGAACCAGTGTCTGGAGTCACTGGTGCAGAAAATCCAGAGTGGTGTGGTCATTAATTTTGAGAAGACTGGACCTGATCCACCACCTACTGAAGATGGCCCAATAGAAATGAAGTATGGACCTCAATCATGGCACAGCTGTCATAAGATGATCTATGTCAGACCTAACCCTAAAACGGGTGTTCCTGTTGGTCATTGGCCTATCCCAGAATCCTTTTGGCCTGACCAGAACTCTCCTACTTTGCCTCCACGTGCAGCTCACCCGCAGGTGAAGTTTTCATGCGTTGATTCAGAGCCCATGGTGGTGGATAAAGTGCCCTTTGACAAGTACGAGCTGGAGCCCTCTCCGCTCACACAGTACATACTGGAGAGGAAATCACCGCACACCTGCTGGCAGGTTTTTGTGTGTAACAGTGCTAAATACGGAGAACTCGGGCAGCCGTTTGGTTATCTGAAGGCCAGCACAGCTCTTAATTGTGTCAACCTGTTTGTCATGCCCTATAACTACCCTGTGGTGCTGCCTTTGCTTGATGATTTGATTACTGTGCATAAGTTCAAGCCTCCAGCAAAGTGGCGGCAATCTTTTGAGAACTATCTTAAAACGGTCCCGCCTTACTATATCACTGCCCTGCGGAAAGCACTAAGAATGATGGGAGCTCCAAACCTTTTGGCTGACAACATGGAGTACGGTCTGAGCTATAGTGTTGTGTCTTATCTCAAAAAGCTCAGTCAGCAGGCAAAGATCGAGGCAGACCGAGTTTGTGCATCAGTAGGGAAAAAAACTGTACTAGAAGGCGGGATTAAACTTCGCTGCAGAAGCTCCGCCCTCTCTCTGGCACACAGGAAGGATTTCACGCAGCTGCTGCACAGCATAATGGGAGATGGCCCAGCTCTGCCAGTGGAGGCAAACAACAAGGAGTTTGCCGGCTTTCAACTAGCTGCTTTGAATAAAGCATTAAAACCACAAGGCCTGCGGAACCCCTATGATATCCCCAGATCTCATCTGATAGACCAGCTGAGCCGCATGAGGCGGAACCTTCTGCACGCCAGCATCTGTATTCTGAAAGGTCAAGATCAAGATCAGCTGCACAGTGTTCCTATAGCTCAGATGGGCAACTATCAGGATTTCTTGAAGCATTGTCCATCCCCTCTAAGGGAAGCAGACCCCGATCAACCTAAACGTTTGCACACCTTTGGTAACCCCTTCAAATTGGACAAGAAGgCGATGATGGTAGATGAGGCAGATGAATTTGTTACTGGCACTCAAGGCAAAGGCAAGCGTCCTGGAGAATCTAGTAATCCTGCTGGGGGCGGGGCCCCTAAACGGAGACGCTGCATGTCTCCTCTGCTTCGGCTGGGACGGGCATATACACCTCCCAAAACACCACCTAGAACTCCAGATAATGATGACCCAGAATTGACCAATCACATCAACAACCATCTCGAGTCAAACCTCAGCTCTGACAAAGATCCAAGTCCTGCACCAGAGACTGAACTGATCCAGCAGAGCAATCACCTTCAGCCAGAAGAGGCGGAGAACCAGGAAAACAGAGTGCAGGAGAATGGCCAGTCCAGCGATAGTGAGTTATCTCTGGGCAGCGAGGGAGAAGAGGAGGCCCCGCGCCGCTACCCTTCTCCCTGCCAACTGAAGAAGATCAGAAACCAAGAGAGCCAGGAACTGAACTCCGAGCTCAGAGTACTTATCACCAAGGAGATCAGGAAGCCTGGCAGACGTTATGAGAAAATCTTCTACCTCCTCAAGCAAATACAGGGCAGTTTGGAAACGCGTCTGATCTTTCTGCAGAGCATAATCAAAGAAGCTGCCAGgTTTAAGAAGAGGGTCTTGATTGAGCAGCTGGAGAACTTCTTAGAGGAGATTCACTTAAGAGCCAACAGCATGAATCATCTGGACGGTTTCTGAGCACTCCATCTGTCCTGTCTGAAGGACTTGCACACACATCTGCACTATTTATGTACTGTTATTTTGGACTTGTGTGTCTCCAGTCTTTATCAGTATtgaagctgatttttttttttttttttcaatgaggaCTTGATGGGTTATCGCTAAACCTCAGGATTGGGAGAAATAGGAAAAGTTGCTCTTTCTACAACAAATGGTCATACGCATACTGCTCTTTCTTtgtctattctttttttttttttgaggcacCCCCTCTAATTGTGCCAAAGAGAACTGGCTGAATGGCATCGGCTTCCTTaatcatttccatttttgtaTGTCCCCCATAGTCCCCTGCGACATTTTGACACATGGCATTGATCACCAATATAAatgttttcctttcatttcagTCGGGAATTGCACCTCTGCAAACTCACTGCTGCACTCAGTCTCTGAAGATAGACGATTTACTGGATATCACATTTGTTAGGTTGGATCTCTCTAATAAAGCAACTAAATCAGCAATATTCTGCACCAATAAGTTACGAAGCAATTCTTTAAAGCTGGAGGTTTGAGTGATGTTGaggttttataattaaatgtagacTTGCACACTCCAAAAgtcatttgttgtttgtttaataactCATCTCAGGAATGATGTTGGCATTTGGCAGCAGAGGAGCATCTTTCTGGAATTTTCCTTTCCCAATATTCTTAAAGCTCTTTCTCCTTTCACAGAAgtagctttttttccccctaaatcTATTGAAACAAATTTGCCCTtttaggccttttttttttaaaccacccAGCATTAAGCATGGCTTCAAGCGACTGTTTTGCGTTTAGCAAAAGACCTTCTGTAGCGCATCATGTGGTTTTCAGACCACAGAATCATGACAGGCTTCTGTGAAAAAGGACTGTGTTGCTTTTCTGAACTGACTAAAAATTGCAAATGACAGTTCTGCACTGAGTAACCGTATTTGATTTACAGAAGCAACAACCAGAAGTTGATACTTAATCATTCAAGATGGAGTTAAGAGCCACTTATTCATTGACATGGGAAGTTGCTGCTAATGTATTCCTACATTTACTGCCAAATATTCAGTaacttagctttttttttttttttttttttttttggtatgtcTTTGTATCTCATCCTCTTAACCCTGCACCCTAATGTAGGGACCAAATCTTTGCCATACATGTCATCGATAAATGAGAAAggcttctttaaaaaagtatttttattatgttgtatatatgtacatggtaacattgaaaatattatttaagaatgttttggtGGACAGccttttttgtatgtatttgaaTAAAGTCTATTTTACACTGTGAATagtcatgtaaataaatgacattttctgtcattaatttctcaGTGGCACAATGTCATTAAAAAGGATTGCAAATCTTAAACTTACTGTGTTTTCTATATACTTTAAACCCGTTAGTTTGCAGGCATAAAGATTGAAGTTTAGTATgggttttggtttgtttggttttttcacttttcaattGGTAAACCACAGACCGATGAAACAGACTTTAGTTCTAGATGTTACAAATTTCAA

Function

GO: NA

KEGG:

id description
K13143 INTS6, DDX26; integrator complex subunit 6

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU103390 lncRNA downstream 72839 13302403 ~ 13327413 (-) True G69888
TU103400 lncRNA downstream 74583 13310873 ~ 13325669 (-) True G69896
XR_006251825.1 lncRNA downstream 168042 13228154 ~ 13232210 (-) True LOC122351987
TU103357 lncRNA downstream 168050 13230867 ~ 13232202 (-) False LOC122351987
TU103184 lncRNA downstream 362799 13035956 ~ 13037453 (-) True G69762
TU103479 lncRNA upstream 1413 13411812 ~ 13412439 (-) True G69953
TU103525 lncRNA upstream 62741 13473140 ~ 13495645 (-) False gypc
TU103573 lncRNA upstream 259404 13669803 ~ 13673807 (-) False tmem163a
TU103577 lncRNA upstream 264319 13674718 ~ 13675514 (-) True G70027
TU103589 lncRNA upstream 268981 13679380 ~ 13682139 (-) True G70033
XM_043248869.1 mRNA downstream 37337 13354751 ~ 13362915 (-) True cops8
XM_043248870.1 mRNA downstream 37338 13358826 ~ 13362914 (-) False cops8
XM_043249431.1 mRNA downstream 148593 13236681 ~ 13251659 (-) True mlphb
XM_043249436.1 mRNA downstream 164068 13235407 ~ 13236184 (-) True prlh
XM_043249120.1 mRNA downstream 198084 13183155 ~ 13202168 (-) False lrrfip1a
XM_043248842.1 mRNA upstream 9616 13420015 ~ 13424845 (-) True dhrs12
XM_043248838.1 mRNA upstream 23566 13433965 ~ 13444172 (-) True parp14rs1
XM_043248171.1 mRNA upstream 39471 13449870 ~ 13454850 (-) False faima
XM_043248170.1 mRNA upstream 39471 13449870 ~ 13454698 (-) True faima
XM_043248890.1 mRNA upstream 62736 13473135 ~ 13495667 (-) True gypc
TU103179 other downstream 414274 12985124 ~ 12985978 (-) True G69757
XR_006251867.1 other downstream 662081 12738044 ~ 12738171 (-) True LOC122352189
TU103144 other downstream 688428 12708631 ~ 12711824 (-) False LOC122351186
TU102995 other downstream 976806 12422429 ~ 12423446 (-) True G69650
XR_006251743.1 other downstream 1210596 12166991 ~ 12189656 (-) True gtdc1
TU103524 other upstream 62741 13473140 ~ 13495645 (-) False gypc
TU103526 other upstream 62741 13473140 ~ 13495645 (-) False gypc
TU103924 other upstream 397423 13807822 ~ 13813327 (-) True G70261
TU103993 other upstream 527860 13938259 ~ 13939868 (-) True G70294
TU104031 other upstream 786080 14196479 ~ 14253776 (-) True G70317

Expression Profile