RNA id: XM_043249091.1


Basic Information

Item Value
RNA id XM_043249091.1
length 2822
RNA type mRNA
GC content 0.41
exon number 3
gene id gpr183a
representative False

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 15164299 ~ 15170670 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTGCTAATACTCAGAGAGGCCTCACTTGTGACACGTTAATATTGGAGGAATTTATTTAGCACATTGATGAAGAATTAAGACTGATACTAGCAATGTGCAGATAGATTGAAACAGATTTCCtgtttttaacaacattaattCACAGGTCTGTGACACTACTAACGTGTGCTTCACGCTTTTACTTACCCACAAGAAAAAAGTCAGACTCAGCTGCCAATCATTTACCAAGTTAACCTTTAACTCAGATATACTGAAAGTAGACATTTGTGTCTCATTTGATTACATCCTCTACTGCATTACAAggaatcatcatcatcatctgtatCTTGTTGGAAGATCTCAGTAGGGGGTTACAAAATCCTGTTGTGCTTCGTCCTTCTGAAACCACAGCTGAACACGGAGGACACGTGTGGGATGGTAATTAACATGTGACAGTGAGAGGTCCTCACTAGAAAGAGAACtactgagaaaaagaaaaaaaaaaatgggcagATCTTGATCAGATATACAGGAAATTATGTTGTCGTCATGGTTACAAAAGCAGACTGGAAATAGTATTTCATTGCTCAGTCGTGGTATGTTAGAAAACGTGGTTAATGCCGGACCAGGAGGTGCCACATTTGACTGCAATGATCAGACCACTTAAcacaaaacagagacaaaaactGGGGCACAAGTGTTGATTTCGAAACTGACCCCATGGAGACGTTAGAAGCTACAAACACCAGCCACAATGACTCGGACACCTGTACCAACCTGTACGACCATCGTGGTTGGGCACAGTATTTCCTGCCTGCATTGTATTCTCTGATTTGCATTGTGGGACTACTGGGCAATTTGTTGGCTTTGCATGTCATCTggccaaatttaaaaaaacttaactCCACAACTCTTTATTCTGCCAACCTGGTGGTGTCGGATATCTTGTTTTCGCTTGCTCTGCCCTTGCGTGCGATTTACTACGCCAAGGGCTTCCACTGGCCGATGGGGGAGGGTCTGTGCAAAGCCGTGGCGCTGCTTTTCTACATCAACATGTATGCTAGCGTCAACTTCATGACTTGTTTGAGCGTGGACCGTTTCATTGCAGTGGTTCTGCCGCTGCGCTTCTCCCGATTCCGAAAAATTCAGAAGGTGCGTTACATCTGCGCTGCCGTATGGGTCGTTGTGTTGATGCAGACCCTACCTTTGCTGTCAATGCCCATGACGAGCGTGGAGAAAAGTGGTCACATAACGTGTATGGAGTATCCCAACTTCGAGAAGATCGACAACCTGCCTGTCATGCTCATTGGTGCCGTGGTGCTTGGCTTCGGCATCCCTGTGATAACGATCCTTGTGTGTTATTCTGCACTTTGCTCCAAGCTCCACCTCCTGGCCAAATCTAACAAATTGACAGAGAAGTCTGGTCGTAGTCGCAAAGTTATCGGCGTGATTTGTGCCGTCATTCTAGTGTTTGTGGTGTGCTACACACCTTATCACATCGACCTCCTGCAATACATGATTAGAAAGCTGCGGTATAACCCAGACTGCTCAGAACTGCATGACTTTCAGATCTCCCTTCACATCACAGTCTGCTTAATGAACCTCAACTCGTGTCTGGATCCCTTCATCTACTTCTTTGCCTGCAAGGGATACAAGAAGAAGGTACTCAAACTGCTCAGAAAGCAAGTGAGCATGTCCTTCTCGAGCGTGGTCAGGACCTCGCCTGAAGGGTCCTCCAAAGACGTGTTTGCGAACGACAAAATCCATATGAACTCCAGAAGCACTCAGAAAGAGAGAAGCAGCGTCCTGTTGAGCACCAGCAACGgttttgaaatataaacaacaataaGAAATGCAGCTGACTGACTTGATATCCCAGCATATTTCTTCCCTTTAGATTACTTTATATGCTgtcaaagctattttttttcagacagttgttgatattttgttttttaacatgtttaaagATTATCACACACTTTCACATGTTCTACATATTACACATTATAGTTTGAGTAATAGAATTTGTTGTTCTGTGTTTTAATTCTTTTGTGATCTTCTTgagtttgtatttaaaaaaaaagaaaagtgcagTATGTCGCTGCATATGCAAGATGTCACTATATATGCAGTGACATACTGAAGTCTTGTACCAAGTAGCAAGAAATGGTTCTTGTGGTGATTTTAGTTTAGACTAATGACTCAAATCTTCTGATTCCAGTCATAAGAAAAGATTTAATCACTGATTCTTCAATGACCCTTTTGGTCCTTAATCATTCCAACACTAGGATGTGACTAATGAGTCACTGAATTACTCTTTTTGTGTTGACTGCAGTCTCTGACTTTAGATGTATGCCAACACTTGGTGATTTTAcctgttaaaaaaatagtttagcaCAAGCAAGTAGTAGTATAATGTAGGCTAAGACAGTGCAAAGACGTGAGCAAGAACAATCCTGACCAAAACCCCCTTACTGTTTTACTGGAAAGATTCACACTTTTATCTCAGTGGTTCCTTATGCAGCAACGGTCGCATTGACAGTCAACATATATTGGCCGTGTCAGCATGTATTTAAATCAGCCAGTTGAGCTTTCACAGAACACAACAAGGCTTGCATGAATTTATTATGTCAAATTAGTAGCTATTTTAAAGCAACAAATGATCAAGATGGGtacattattattgaaatagtgttatttaattttgacaaaCAACCAGCTATGTTTACATGGACACCTTTtgtaacaacataaaaaaaaatcatctgacTGATGAATTTGAACATTGTTCAGTGTTTaatataatgctaaataaagTGGTCAGGTTCATGGATCAAGGA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU104311 lncRNA downstream 122569 15036082 ~ 15041730 (-) False LOC122351681
XR_006251790.1 lncRNA downstream 123476 15034819 ~ 15040823 (-) True LOC122351681
TU104296 lncRNA downstream 182446 14975412 ~ 14981853 (-) True G70494
XR_006251854.1 lncRNA downstream 221436 14937124 ~ 14942863 (-) True LOC122352110
TU104213 lncRNA downstream 245459 14916800 ~ 14918840 (-) False G70438
TU104306 lncRNA upstream 57800 15228296 ~ 15275841 (-) False G70503
TU104358 lncRNA upstream 86492 15256988 ~ 15260906 (-) False LOC122351294
XR_006251729.1 lncRNA upstream 87192 15257688 ~ 15262676 (-) True LOC122351294
TU104305 lncRNA upstream 99333 15269829 ~ 15275841 (-) True G70503
TU104406 lncRNA upstream 248503 15418999 ~ 15421577 (-) True G70581
XM_043249094.1 mRNA downstream 3021 15157104 ~ 15161278 (-) True gpr18
XM_043248244.1 mRNA downstream 157629 15001464 ~ 15006670 (-) True klf5b
XM_043249515.1 mRNA downstream 266174 14884111 ~ 14898125 (-) True morc3a
XM_043249516.1 mRNA downstream 270182 14884111 ~ 14894117 (-) False morc3a
XM_043249517.1 mRNA downstream 286643 14875492 ~ 14877656 (-) True vtcn1
XM_043248410.1 mRNA upstream 8978 15179474 ~ 15181677 (-) True si:ch211-184m13.4
XM_043248278.1 mRNA upstream 93383 15263879 ~ 15267519 (-) True zic5
XM_043248277.1 mRNA upstream 218722 15389218 ~ 15399437 (-) False tmtc4
XM_043248276.1 mRNA upstream 218722 15389218 ~ 15399437 (-) True tmtc4
XM_043249240.1 mRNA upstream 254951 15425447 ~ 15490245 (-) False nalcn
TU104031 other downstream 910523 14196479 ~ 14253776 (-) True G70317
TU103993 other downstream 1224431 13938259 ~ 13939868 (-) True G70294
TU103924 other downstream 1350972 13807822 ~ 13813327 (-) True G70261
TU103524 other downstream 1668654 13473140 ~ 13495645 (-) False gypc
TU104362 other upstream 132607 15303103 ~ 15305975 (-) True G70549
XR_006251733.1 other upstream 219353 15389849 ~ 15399437 (-) False tmtc4
TU104521 other upstream 600925 15771421 ~ 15771864 (-) True G70663
TU104983 other upstream 1646644 16817140 ~ 16823694 (-) False G70986
TU104984 other upstream 1646644 16817140 ~ 16823775 (-) True G70986

Expression Profile