RNA id: XM_043249094.1


Basic Information

Item Value
RNA id XM_043249094.1
length 3171
RNA type mRNA
GC content 0.39
exon number 2
gene id gpr18
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 15157104 ~ 15161278 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCCAAACCTGTCACATCTTTACTTTTCCAATGCTCTCAAAACCGCATATGACATAGTGTTTGCTATTGAGATATATTCTCCACCAGTACATGCATTACAGGAAGTGAAGGGGCTTCAcagaaaccaaaagaaaaattcTAATCTAAATAAAGACACTGGCTTCATGACTTCCTCTGTTAGATCGAAGCTCGGCAGTGAGGACACATTATAATCATCAGCTATACAGCCCTCAGAACAGTTACGATGCCAACATCATGGATCTCTGAGGCAAACCATCATGGATCGTAACACATCTTCACCAGCCATGGAAGGCCACGTCCCCCAAGTGTACCGGACTGTTAGCCTAGTGTTTTATGGGATTATTTTCATCATAGGCATAGTGGTCAATCTGACCGCACTCTGGGTCTTTGCCTTGACCACTAAAAGACGGAATTCCATCACTGTTTACATGATCAATGTCGCTTTAGTGGACCTGGTATTTATCTTACTGCTGCCTTTTCGAATGGTCTACTACGGTCAAGACTACTGGCCCTTTGGAGACATGTTCTGCAGGATCAATGCCGCAATAACGGTACTCTATCCCTGCCTGGCTTTGTGGCTCTTTGCCCTCATTAGCACAGATCGCTATGTGGCCATAGTGCAGCCACGACATACTCGAGAACTAAAGAGCGTTCGTAAAGCCTTGCTGTCCTGTGCTTTAGTCTGGATTATGACTCTGGGCAGCACAGCTCCGCTTGTTCTCTTGGAGGAAGACCCTGACCGTGACTCAAACTATACCACTTGCATCAAGATGCACGACATCATCTACTTGCGGCGCGACAATCCCGTCCACTTCGCACGCATTGTCTTCTTCTTCCTGGTGCCAGTGTGCATCATGGTGGGCTGTTACATGATCATCGTAGACAACCTCATCCACGGTCGCACGTCCAAACTGAAACCAAAAGTCAAGCAGAAGTCCATCCGGATCATCATCACATTGATCATTCAGGTGCTGGTATGCTTTGTGCCTTTTCACATCTGTTTTGTGTCCATGCTGCTGGCCAGCAGTGAAAGGGGTTACAACACCTGGGGGGCCTTCACCACCTTCCTGATGAACGTGAGCACAGTGCTGGACATCATACTCTTCTACATTGTGTCGAAGCAGTTTCAGGACCGTGTGATCAGCGTGATCTTGTACAGAAACTACCTGAGGAGCGTTCGCAGGAAGAGCCTTCACACCAACAGCATTCGCTCGCTCAGCAACCTGACCAGTGCCATGATCTGAGGAATCATGCAGATGATGGTAGCAAGTAGCAACTGAATGTAAATGTGTCAGCTTTGAAATTGAAATGACAGATCTGCAGATCAAGATGAAAGATCATACTAAAGAGTGTGACAGCAGTTCAACTCAGACAGATCACATGTGCTACAGTGTCTATCACTGCTCATTTGCATAAGGTTaaacttttattagttttgctGCCAAATACGCATCTCCACACACTGTACAATAACTTTATGTGTGAACatgctgcaggtgtgtgtgatgtttttaaaattcaatttatgAATTGGGATGCTTCAGTTAGAGCCacatataatgcaataattataaaatgtttaatagttttCTCGGATACATGTATGAGGCTAGAAGGGTTGCACTGTAAACccgaatgaataaattaatcaattGGTGTTTAACTTGAATTGAACAAATAACTGACATACAATAACTGAAACTGAGATATATTAAGTAAATCTAAATTATTAACTTTCTTTAATGAACTTAAAATGGAgagtaaatgctaaaattacgTAATGTGAGATTTAGTAGTGCTCAGTGTTTTGCTAGGCTAATACCATCATGGCAAAGAGTGGAGCATGAGTTCGGTTTATGAATCTTCTTTATTGCCTCATTCAGCAACATACTAATTATAAACATTGCTTTACCAAATAGTACATTAGTATTTGCTGAAGTAGCTATAGCAAATTTAAGTTTTCACTACTAAGCATATGGAGATTGCGCAACAATTAAgttaaatgtactgtatgaGTTGgcttaatcaaatattttacattaagagCAATCTTAAACTGATTTTcttaacttaaaatgaaaaaaaaaatttccttcgGGTTTACAGTGTGTTGCGAGATAATCACAGCAAGGTCTTTGAAATAGTTTGTATGGCAAAACTTTCTTTGCAGTCTTTGCACAATCTGTGCAGAACATGTTCCTTCTTTTGCTAAGCATGCTTTTTGTCATACCAAGTATGATCTTCAAAAACACTGCATGTCTTTGAAGAGGTTAGTTCAAAAGGAGTGCATAGTTGTATATTCGGTCTTTTTAGTGTAAAACAAGATACTACCTTTCAATGTGGAATGTAATGCACATTAAATTTCCCTTAAAGGGAAAAGATAATTCAATGTAAGAGCACTTTATCTCTAATAATTTGGGTatttagtgaaaataaaaacaaaaaactaacaaatcacaaaaaaaacacacacaaacacatacacacacacacacacacacacacacacacacaaacacagacagtgCACCATTTTGTTTAATACATGCTGATCACAAttaaaacagaactgaaacaggATTTTGTTATAGCACATGGCAATCAACTTGACCCGTAGTATATAAAgggccagcaggtggcgctacTGACCAGGGCACATTTATGCTACTCTGACAGTGCTTTATCTCAATATCACCATCAGGTGGTGTCatgtaatgttaacaaattactTGAAAGTGGCATTGTATCTGCTTAtagttttaaatgatcttttcaattaaaattctctctttgttttcactAACGTTctataaaatatgtaacatgACGGATGGACTGATTTTTTCTTTGGGAAGTTGACACATTCTGTGGCTATATAAGTGCTTCTTTTCTCATTCTGTTATCATTACTCTCCATGTATTGCAGCTTACTGAAAGactaatatttgtcattttttaaaaatgccaaatTGCAGGATATTTCTGATTATAAGACCTTATACATTCATAtcaattttaaactaaaaaaatgatgctgcaaaaaaaataaaaacaaacaatcaatctGTTATGTATCCAATACCCACACACTTAATGTATACCCTGCACTTTACTTGATTAAGCTTAATTAAAATTGATATATACTTCTTAAA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K08410 GPR18; N-arachidonyl glycine receptor

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU104311 lncRNA downstream 115374 15036082 ~ 15041730 (-) False LOC122351681
XR_006251790.1 lncRNA downstream 116281 15034819 ~ 15040823 (-) True LOC122351681
TU104296 lncRNA downstream 175251 14975412 ~ 14981853 (-) True G70494
XR_006251854.1 lncRNA downstream 214241 14937124 ~ 14942863 (-) True LOC122352110
TU104213 lncRNA downstream 238264 14916800 ~ 14918840 (-) False G70438
TU104306 lncRNA upstream 67018 15228296 ~ 15275841 (-) False G70503
TU104358 lncRNA upstream 95710 15256988 ~ 15260906 (-) False LOC122351294
XR_006251729.1 lncRNA upstream 96410 15257688 ~ 15262676 (-) True LOC122351294
TU104305 lncRNA upstream 108551 15269829 ~ 15275841 (-) True G70503
TU104406 lncRNA upstream 257721 15418999 ~ 15421577 (-) True G70581
XM_043248244.1 mRNA downstream 150434 15001464 ~ 15006670 (-) True klf5b
XM_043249515.1 mRNA downstream 258979 14884111 ~ 14898125 (-) True morc3a
XM_043249516.1 mRNA downstream 262987 14884111 ~ 14894117 (-) False morc3a
XM_043249517.1 mRNA downstream 279448 14875492 ~ 14877656 (-) True vtcn1
XM_043248126.1 mRNA downstream 282412 14868759 ~ 14874692 (-) True trim45
XM_043249093.1 mRNA upstream 3021 15164299 ~ 15170670 (-) False gpr183a
XM_043249091.1 mRNA upstream 3021 15164299 ~ 15170496 (-) False gpr183a
XM_043249092.1 mRNA upstream 3021 15164299 ~ 15170119 (-) True gpr183a
XM_043248410.1 mRNA upstream 18196 15179474 ~ 15181677 (-) True si:ch211-184m13.4
XM_043248278.1 mRNA upstream 102601 15263879 ~ 15267519 (-) True zic5
TU104031 other downstream 903328 14196479 ~ 14253776 (-) True G70317
TU103993 other downstream 1217236 13938259 ~ 13939868 (-) True G70294
TU103924 other downstream 1343777 13807822 ~ 13813327 (-) True G70261
TU103524 other downstream 1661459 13473140 ~ 13495645 (-) False gypc
TU104362 other upstream 141825 15303103 ~ 15305975 (-) True G70549
XR_006251733.1 other upstream 228571 15389849 ~ 15399437 (-) False tmtc4
TU104521 other upstream 610143 15771421 ~ 15771864 (-) True G70663
TU104983 other upstream 1655862 16817140 ~ 16823694 (-) False G70986
TU104984 other upstream 1655862 16817140 ~ 16823775 (-) True G70986

Expression Profile