RNA id: XM_043249182.1


Basic Information

Item Value
RNA id XM_043249182.1
length 9658
RNA type mRNA
GC content 0.49
exon number 35
gene id myo16
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 6319090 ~ 6477546 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCGAGGGGTGTGTGCagcggtgggcggggctaaggACGCGTCAATCAGCGGCGCTACAATAGCACGTGCGGCGGTCATGGTCACAGAGCGGCGCGGCGGAGTCGACGCGACTGCGGGCTGCCGATAGGAGAGAGGGCGAGCGCTCACCGTCACCTTATCCATCCACCGCTCCTCCTTCACTACAACCGCAACCGCCTCTGCAACCCGATCGCCCTTTAATAATGCACGGGGAGGTGAAGCGAATACCAGCGGCCGGGCTCTGAGTGATGTATCGCGCCGGTTACTACAGCGCCGCACCGGAGAGACCGAACCTGTAGCTGTGTGATCCGCGGAGAAAATGTCACACTATCATTTCATCAAATGCTGTTGTTTTCAGCTATGTAACGTGTTCAGGCAGAACATGGAGATAGACCAGTGTCTGCTGGAGTCTCTGCCGTTGGGCCAGCGTCAGAGGCTGGTCAGACGCATGCGTTGCGAGCAGCTGCGGGTCTACTACGAGCGAGAGCGAACGCTACAGAAGCAGAGCTTCCCTAAACCCCGCTCCACCAACCGCAAAAAACAAAGAATCAGCTTCACGCTTTCAGACGTCATCCAGGACGCTATCATACGACACGATGACAAAGAAGtgcTGAGGCTGCTGAAGGAGGGAGCTGACCTGAACACAGTGATTTCCTCAGGAGGATCTCTGCTCCATCTGTGCGCCCGCCATGACAATGTGTTCGCAGCAGAGATTTTGATAGAGAAAGGACTGAATGTCAACCTGCAGGATGAAGACCTCTGGACTGCCCTGCATGTGGCCTGTGCCTGTGATCACGCAGATatggtgctgctgctgcttctgGCTGGAGTCAACGTGCTGCTGCAGGATGTGAACGGGAACATCCCACTCGACTACGCCACGGAGGGGACGGAAACCAGCTACATCCTCATCAGACACCTGGAGGAGAATGGAGTGGACATGAGCTCTATGCACCAGATGAAGACCCAGCGCTCGTGCACCATGTTGTCTGACGTGAGGCAGCTGGTCAGCAGCGGGGGCAGCGTCAATCAACAAAATGATGACGGGGTCACGCTGCTACACATCGCCAGTGCCAGCGGTTATAAGGAGGTGGTGTCTATGCTGCTGGAGAGCGGGGCGGACGTCCAGGTGTCTGACAACAGCTTCTGGACACCATTACACCTGGCTGCCAAATATGGGCAGACCCAAATCGTGAGCCAGCTGTTGAAGCACAAAGCAGATCCTTCTCTCCTGAACTGCAACCAGGACAAGCCCTcagacataGCTGCTAGTGAGCGGATTGCAGAGATGCTGATGAGAGCAGAGGAATTCTGGgtacagagacagacagatccCTCGGCTCTGCCTCCACAATCAGAAGAGCACTGCACAGAGGCCAACCAGGACAGCAGCCTGCCTGTAAAGAAACTGTCTACTATAGCTTTACCCATCTCTAGGAGGGACAGTTTGTTGGAGAAGGAGGCCATGTTCAGGGACTCAGGAGGAGCACTGACGCAGCAGCCTTCACTTGATAACGGGCTGGACGGACCGTATCCCAGTGCTGCAGGAAAACTTGAGCAGgTGAAACTGATGCCTCCCGCTCCTAATGATGACCTTGCATCCCTCAGTGAACTCACGGACAGCAGCCTGCTCTACGAGATGCAGAAGCGCTTTGCCAACGACCAGATATATACTTACATTGGACACATTCTTCTGCTCATTAACCCTTACAAGGACCTACCCATCTACTCTAATCTGgtCAGTCAGTTGTATCTGAGCTCCAGCGGTCGTCTGTGTTCTTCTCTCCCTCCTCATATCTTCTCTTCAGCGGAGCGAGCCTATCACATGATGCTGCAGGAGAGACGCCCGCAGTGTTTCATCATCAGTGGAGAGAGTGGTTCTGGGAAGTCTGTGGCCTGTAAGCACGTCCTCAAACACCTGGCTGCTCGCTCAAGTCCCAAAGGCTTCGCTTTAGAGCCACGAATGAAGCATGTAAATGTGATCTTGGAAGCTTTCGGCCATGCTAAGACTCAGATGAACTCCTCAGCGAGCCGTTTCATCAAACTCATCTCACTGCAGTACTGTGAGAAGAGAAAGACTCTGCTCAGAGGTCATCTGTACACTTACATGCTGGAGAAGTCGAGGGTCATCTGCACCCCAGCGCATCAGCAGAACTTTAACATCTTCTACCTGATGGCCGAGGGACTTTCAGCAGAAGAGAAGAGTAATCTATATCTAAACAATGTCCTAGCCCACAGgtGTATGAACGCAGCGGCTCCTGGTGAAAGTCCTGCAGTAGCTACCACGTGTCCTCAGAGCAGAGAGAAGCTCTCGGCCCTTAAGCAGGCTCTGCGGGCCCTCGGCTTTAATAGACTGGAGGTGGAGAATTTGTTTGTGGTCCTCTCTGCGCTGCTGCACTTGGGAGACGTGCGCTTCACCGCCCTGACAGACGCTGACACCGCATTTGTGTCCGACTTGCAGCTGCTGGATAGAGTGGCTGGAATGCTGCAGGTGAGCTCTGAGGACCTCGGCTCTGCCCTCACCTCTGATGTGCAGTGTTTCAAAGGTGATGTCATAACAAGGCGCCACACAGTCGACATGTCCAACCATCACAGAGACCTCCTGGCAAAAGCTTTATACGGACGACTCTTCAGCTTCCTGGTCAATAACATTAACTTTTACCTCCAAGGCCATGAAGACAGCATGGGAGATCCTGCCCTTGAGATAAGCATCCTGGACATCTTTGGCTTCGAGGAATTCCACCGCAATGGTTATGAACAGCTGTGCGTGAACATGGTGAATGAGCGGATCAGGCAGTTCACCGCAGACGTGCTCTTCCAGCAGGAGCAGCAGGAATGTCTGCAGGAGGGGGTTGCCATGGAGACGCTACGCTCCCTCTGCAACCAGACAGCGGTGCTGGACTACTTCTTCCAGaagCCTCAGGGTGTGCTGTGTATCGTTGATGAGGAGAGTCAGTCCCTCAGGCCATGTGAAGTCAACCTTTATAAGCGACTGCAGATGCAGCTGGATTCCTCCGGTTTGGATGCCGTCTCCCTCACGACCAAGGATGGCAACGGGAACCCCCCACCCAAAGACCAGGGGCCATCGTTTACCGTCACTCACTACGCCGGCAAGGTGACCTATGACCTCACCGGCTCACTGGACAAGAACAAGGATGTTCTACCCCAAAACATCTTGTTTGTTATGAAAACAAGTGAGAACGTGCTCATCCATCAAATGTTCCAGTGTAAGCTGACTCAGACGGGTTCACTGGTTCCCCACCACCAGCGACTGAAGCTCCGCGGGCCCAAAGGCACTTTGCTTAACAAGAGCACTACCCTAAATCCTGCCAGAGACGCCAAGAAATATGTGGAATTGAACAAGCTCCTGAAGAAGAAGGGAGCGATGTCCTTCCTGCAGAGTCTGGATCGTTGTGGACCGGTCACTGTGGCGGTGCAGCTCAGGAACTCTCTGTGTGAGATCACCAGTAAGCTGCAAGCATGTACGCCTCACTTTGTTCAGTGCGTCAGGCCCAACAGCGCCGGAAGGCCTGATGTGTTCGACAGCTTCCACGTGTCCTCACAGCTCCAGTACGTAGGGGTTCTGGAGATGGTCCGCATGATCCGGTATGGATACCCAGTCCGCCTGTCTTTCCCCAGCTTCCTGAGCAGATACAGAGAGCTGGTGGACACCATCCTTACTGACAGGAAGAAAGCATCTGCAGAGGAGAAGTGCCGTCACATTCTGCAGCATTGTAAACTCCAGGGCTGGCAGATGGGGAACAGTAAGGTTTTCTTGAGATACTGGCAGGCCGATCACCTTAATGATCGCTGCCATCAACTGCACAGGAAGATTATTGTCTGTCAGAAAGTGGTGCGTGGCTGGTTGGCCAGACAATGTGCGCGGCGCAGGCTCACGTCTCGGCAGCAGGAGCAGTGTAACGTCCAGCGGTTCCTGCAGGGAGCAGAGGACTTGGGTTTGCGGGCTTACGACAGCCTGGTCATCCAAAACGCAGCTGATATTGCACGAGAGAATGACCGCCTCAGGGGTCACATCAGTGCTCCGCCGCTGGGCGAGAGACCGGAACCTGTGGGCAAAGAAGAAGACTCGCCCAAGAGGATTGTTGAAAAAAGTGGGAGGGTTAACGATGTGGCAGGCCGTGGGGGGAACAGACCACTCCGGCATTTCCGCTCCAGCTCTGTGCCTCTACCCCTGGTTATGGACAGCTTGGTACACTCCAGTATTGGGACATCAATCAAAGCAGCCCTTCAGCCTGCGCCACACTCCACTGAGGAGGGAAATGGAGGGAGCCTCTCCTCCCCACGAAAACAACCTCCTCCCAAACCCAAACGAGACCCTAATACACGTCTGAGTGCATCATATGAGGCAGTGAGCGCTGGGCTGAGTATTGCACCTAAAGACAGCCCTGCTGAGGGTCAAGCCTCTCCATCTGGAAGCCCACCAAAAACTCAACTCTCTCCTTCTGATCCTCTCTCTAAACCACGCCCTCACAGTGATGACTACAGCACCATGAAGAAGATCCCACCCCCCAAGCCCAAACGCAGCCCTAATACCAAACTGACAGGCTCTTACGAGGAGATCTCTGTACCTTCTCCTGCACGGCCCACGGACATGAAGCTTGTCAGCCTGTTACGAGGCGGCCACTGCCTGGGCCTCATCCAGCGAGCAGCATCTGCGGATGGCCCCCATTCTTCTGTGCTAAGCTTATACCCCTGCCAGGATGAGGAGGATGTGTATATTGAGATGGTGGGGGCCTCAAGAGCCCTCAGCCTGGCAGATTCCCACAGTCCAGAACTGGGAGAGGCAGTATACGAGGAAATGAAGTACTTCCCACCTGATGAGGTGGGGTCAGCTCCGGTGGTCAAGCCTGAAACTGTCAATCCCACTACTGCAACCCTGCCTGCCCCAGTTCTGGAAATCAAGAGGCCTGTGACTTTGATGGAGCACTCTGGCACTCTTGGGGGAAAGCAGCAAGGAAAAGATGGGACGTCATGTGACATTCCAGCTCCATTCCCCAATCTTCTTCCACACCGTCCCCCACTTCTAGTCTTCCCTCCATCCCCTGTCACCTGCTCTCCTGCCTCGGATGAGTCCCCTCTTACACCTTTGGAGGTTAAGAAGTTGCCGGTGTTCGAGACCAACCTCAACTACACCAGCCAGGATGGAGGTAGCCCACTCTCACCACAGTACACCCGGCAAAGAGCTGACTCCTCACCAAGTCTTTCTGTCCTAATGCCAGACAAATCTACGCCACCCTTGActcctcctccccctcctcccCCTCCAGCAGCACTTCCACCTCCTTACCGTCCCCCATCCCACTTCCCCTTTCCCCCTGAACCAAACTTCTTGGCCCTGACCCGTGCAGCTTCTGTGGCTACCACTGATTCCCCCAAGGTTTCCCATAAAATAGGGCACGGTCTGGCAGAGACGCCCCCAAGCAGTACGAAACCTCCCTTCTCCCCAGTAAAGACTTCGAGGCCAGAGCCCCGCAGAGCTCACTCCTGCTCCTCATCGCCTCTGCTCTTCAACCCTGCCAATGGGAGACCCCTCACCAGCCCTCTAGACGAGCTCAACACTCTTTTCAGCTCAGGGCGCAGCCTGCTCCGCAAGTCCACCACTGGAAGAAAGATACGTGACAGTGGACTCTCAAATTCCAACATTAACCTGCCGGGTCGAGAGGATCAAGGCCCCATCTCTCCGTCAGCACAGTTACAGGACAAAAACGCCAATAACCACACTTCTCCCAACTCTTCAAACCCTGCCCCCATTGAGAACGGCAACCAGATCTCTAATGGGACGTTGGAAGACGAGGGACATCCGAAGTCTAATGCGTCCAGCACCTCAACGTTACACAGGCACATGGACAGCCACCACACTCAGGTTCTCCAGAGGTCACGTGCATGTGGGGATCAGCGGGCCACTCTGCAGGAATTGTTGCGCTGGCGGAGGAGTGTTTGTGATGGACGACCGGACTGGCAGAACGCTTGGCTCCACACAAACACCTCACCCACCCTAACAGTGAAGACCAAGAGTCCCCGAAAGAAATCATCGCCCTAGAGATTGTGGTCTCCCTGAGTTAAACCTCAGTTAAACCCCACTCCTTAGGCCCGATGGCCCTTTTTATGATTTGCCCTTCACATAGGGGTGGCGTCCTCTAAACAGAGCAAGACTCTGAACTCAGGAGAGTAGGGCATTCGAATTGGTTCATGTTCCTCTCTTcacttcttttaaaagaatgaaaggTTCCTTGgaaaattgtttcaaaatgaCCAGCTGGGACCAAATAACCGTGTccaactttaaaaaatataatgtcatTGTCTTGCTAATATGAATCCCATTTGCAGTTTCCTAAGCATCATGCTGTTTTGGAAGATTTCATCACATTGCCTTGATTGCAACTCATCAACGCTATCTTAGGGCTGTGCAAATGTATCTCAATTGTGTGCTATAGTCTACATTGTGGGCCATATTTTAGTGGTGCTGGTCGCTCCACATGTGGTTGTTGTTGACTGGGTTGGGTAAAAAGTGCCAGTTCTGTCCCAACTCGAGACACATGGATGCGACAGACCTTAAAGTTTACAAGACTTGTGTTGACCTCCTAGGACTAGCCTTGTGAACAAAGTCCTCCTTCAGGTTCAGAGAAGCAGCTACACCTCACGCTTTTTCAGGTGCTTTGGTTACCCTCTATCAGAGGTGGAAACCATCACACACAGGTTGTGACCTTACGAAGAGGTCAGGGTTCAGGGAAATCACAAGTAACATCACAGGTCCACAACATTTCCACCAGCTTCTGGACTACATTCATTGTTCACGCTAGGCTAATGTGCGCACATTTCCGCAACACAAAACCGAAAGGTTTCGCAAGACACACTGTTGACAAACTTGAAGACGCTTGATTTTTTTGAAAGGTTAAAGAGCACAATTTTCCAAACACACCTTCAGATGGAACAATCATTGCTAGTCATGGATATTACTGCTGATGTGACTCTGAAATTACCCTTAACTGTTTTTGGACTTTTCCTCAAAGGTGCTTCTGTACTAATGCTGGGTTGTATGGTGTCATGTACCTTAGTAGACAACCTATAAAAACAGCACATGACCTGTGGTCTCAAGTTGAAGTTTCAAACTATTCATCCCTGCAGTCGTTCATAATTTGTGAAGGTACACAGATGCCTCCAGACAGAGGCCTTGAGGCATTTGGTTTATCCATACAGTGTGCATATGCAGATTTATTACCTGAAAGACCCTGGGTAAATATTTTTGGACCTTGATCACTGGGTTTACAGCAGGAGACCCACCATAAGCACAGCGCTTTTCTGAGAATAAGCAGAACTTGACCTTCTGGTTCTGGTTTACTTTGGTTTGACTGACTAGATGGATTATGTACAGATTAGGAGTGTTTATTAGCAAATTATTGTCTTCATAGTGGAAAGATATCTCTGAATGTTCAAGGATGCAATGACAGAAGGACTACGGTGGTGGGTTTTATAGTGTGAATATTGTTTTAGTACAAAATGATTGTTTATTGTCAACTCTTCAGTCGTAGTCCATCCCTACAAGACTTCGGCCTACctttgaaatgtataaatatatttaatgtattgtacagaacatttgtgtttgtgcaagTACGTTTAAGTTGCACTTTGCCGCATGTGTTTTGTTTAGGCTTCATTGCTTCATGCCTGTgtgcttaaagggttagttcacccaaaaatgaaaattgtattttactgtattttactcaccctcgaggcATCCTAGCTGTATAAAACCTTATCAGAAAAATCCAGTTGGAGTTATTAAAAATCAGAGTAATTATATTGAAATCttccaacatttttctttacaaatcctttttgtttgtatttctaaTTTGTGACtggcgttttgttttgttttctctcctcACTTGTCACTAATCACTCAACGCAAtatgttttatgtcatttgACTGAATGGCTTCTGCGTATGATTGAATTTGAAATACGGATATTTTCTTCTGTAAGACAAATTTTTTTATGGATGTGTGCACTTCATTTGTCATCTTGTGGACTGTTTAACAGAAACAACTGCTGACTGCAACGATAACTTTGATCGGATTCATctgacagaagaaagtcatatacacctaggatgcctcGAGGATGTGTAAAACACAggttaattttcttttttggggtgaactaacactttaaaaaacaagTTCCCAAAATGTTACACCTTCAAAAAAGAGCCAATTCAGTCCCCTTTGACACAATGATCCACGTCAAGGTCTTTGGTTTCAGTATTTGAATGTATATACATCTGACAAAAACAGCGACTTAATATGTATGGTTTATACAACCAGTTGTGTTTAATGATTGTATTGAAAcagtaatttattttcagtgtgaAACATGAActtaaattcattcaaattaacATATTGCAGAAACTATTTTAAAGCCCAGTTTTGTGAGTCTCTATAAATCATCACGGACAGCTCTATAAATGGGCTGATAAGGCATTCTGAATCTCATAATTACTTCTATCTCTTCTCTTCCCAACTAATGTGAATAGTCCCTTTCCCCATTCCATTGGACGGTGGTTTAAAAGCATCTTTCACTGCTGTGCAGTTCTGCAGATCAGAGACGCATATTAAAATCACTGTGCAGGCCAGTGCTGACGGAGACCGGAACTCACTTCCTGGGTTTGATCCACAGCTGCTTTGCATCGCTACTGCTTAACAGGGTTACGATActattatttgaaacatttatttattgaaacaaaaaaatgctattttataatGTCTAGTATTGACATGTCATCAATActataaagcaaaaagagaatgaaaagaaCTGTACAGTATGAGCCCATTTTTCTACTCTGTTGTTGAAAAGGGAACGTATGTTAACGCATGAGATCTCTTATGTACATGCCCCGTCTGTCTGTTTTCCTGTGCTTAGTCTGATACATCGTGGAGATATAGACATCATTGGATCATGCCCTTTGTCTTAACTGGTGCTGTGGAACCATCCGAACTTGATGTTACGAACTTCCTCTCACCCTTCAGCCCAACGTGGATTTAACGGACCTCTTGTTTTGATGGAAAACAATGGGCAGAAATGGTTTGCCCAAGATCGATGTGTAGAGAACATTTCCCAGTGTTGTAGTCGAGACTGGTTTATTCGAGCCAGAGTCAAAACCATGTCCAGAATGGGGTTAAGCTCGGGTCAagactggttaaaaaaaaaaaaaacaacatatttttctctcttgttcTTAACTTGGACTCCACCGTCTTTTGGTCTCGGTTCTCTACTTACGACACTGACGCATCTCCATCTTAAGAAAGTGAAAACAAACTCATTCAGATTCTTGTGCTTGCTCAGATACGCAGAgatcaacaaaatatttaattatcatGGCTGTTGCTGTCTTTTTTAGTCAatgtgttttaggttttttccttgtttttgaTCCTTCTGTAAGTTCTATATGAATATGCCTATTACTTCAATACATGTTTGTGGGCaaaggaaaaaatgtatgtcttggtacatattttgtttcaaaatgttttataaaattcCTGTACAGCAATAAAGCACAGTGTCAGTCAACTggcaaaaaaatatagatata

Function

GO:

id name namespace
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0003774 motor activity molecular_function

KEGG:

id description
K17481 MYO16; myosin XVI

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU100892 lncRNA downstream 77488 6241322 ~ 6241602 (-) True G68189
XR_006251731.1 lncRNA downstream 176408 6117851 ~ 6142682 (-) True LOC122351301
TU100773 lncRNA downstream 271494 6045115 ~ 6047596 (-) True G68120
TU100695 lncRNA downstream 512763 5805940 ~ 5806327 (-) True G68082
TU100657 lncRNA downstream 583307 5735337 ~ 5735783 (-) True G68055
TU100973 lncRNA upstream 227948 6680095 ~ 6683011 (-) True G68265
TU100974 lncRNA upstream 245539 6697686 ~ 6697893 (-) True G68266
TU100979 lncRNA upstream 263849 6715996 ~ 6718143 (-) True G68270
TU101056 lncRNA upstream 322927 6775074 ~ 6776415 (-) False LOC122351577
XR_006251776.1 lncRNA upstream 323139 6775286 ~ 6776974 (-) True LOC122351577
XM_043249430.1 mRNA downstream 219178 6099071 ~ 6099912 (-) True LOC122351979
XM_043248544.1 mRNA downstream 220286 6088469 ~ 6098804 (-) True LOC122351467
XM_043248543.1 mRNA downstream 232071 6069745 ~ 6087019 (-) True LOC122351466
XM_043248234.1 mRNA downstream 340212 5975136 ~ 5978878 (-) True LOC122351270
XM_043248541.1 mRNA downstream 387954 5912855 ~ 5931136 (-) True LOC122351463
XM_043248919.1 mRNA upstream 35091 6487238 ~ 6492356 (-) True tnfsf13b
XM_043248920.1 mRNA upstream 35091 6487238 ~ 6492342 (-) False tnfsf13b
XM_043248918.1 mRNA upstream 40462 6492609 ~ 6498204 (-) True abhd13
XM_043249750.1 mRNA upstream 49262 6501409 ~ 6599198 (-) True LOC122352171
XM_043248124.1 mRNA upstream 234071 6686218 ~ 6708208 (-) True LOC122351204
TU100887 other downstream 58021 6246900 ~ 6261069 (-) True G68188
TU100850 other downstream 219207 6099347 ~ 6099883 (-) False LOC122351979
TU100782 other downstream 275165 6043275 ~ 6043925 (-) True G68124
TU100767 other downstream 396270 5919757 ~ 5922820 (-) False LOC122351463
XR_006251815.1 other downstream 949501 5349955 ~ 5369589 (-) False LOC122351925
TU101110 other upstream 618838 7070985 ~ 7148620 (-) False LOC122351350
TU101496 other upstream 1562302 8014449 ~ 8018105 (-) False LOC122351623
XR_006251804.1 other upstream 1626989 8079136 ~ 8094847 (-) False als2a
unassigned_transcript_1465 other upstream 1888796 8340943 ~ 8341015 (-) True trnak-uuu_106
TU102057 other upstream 3456041 9908188 ~ 9910178 (-) True LOC122351483

Expression Profile