RNA id: XM_043249228.1


Basic Information

Item Value
RNA id XM_043249228.1
length 3613
RNA type mRNA
GC content 0.45
exon number 15
gene id mao
representative False

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 16477543 ~ 16504927 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGAGACGAACAGCACCATGACTGCGAACGCATACGACGTGATTGTGATTGGCGGAGGCATCTCAGGTCTGAGTGCCACCAAGCTGTTGGTGGAGAGCGGCCTGAATCCTGTGCTCCTGGAAGCCAGAAACCGTGTTGGTGGAAGAACCTACACTGTTCAGAATAAGGAGACCAAATGGGTGGATCTGGGAGGAGCTTACATCGGGCCCACTCAAAACCGCATCCTGAGAATAGCCAAACAGTATGGTGTGAAAACATACAAAGTCAACGAGGAGGAGTCTCTGGTTCACTATGTGAAGGGCAAATCATATCCATTCAAAGGGCCTTTCCCTCCGATGTGGAACCCGCTTGCCTACCTGGACTACAACAACCTCTGGAGGACAATGGACAAGATGGGAATGGAgATTCCTAAAGAAGCTCCATGGAGGGCACCTCATGCAGAAGAGTGGGACAAGATGACCATGCAGCAGCTCTTTGACAAGATTTGCTGGACCAGGGCCGCTCGTCGCTTTGCCACTTTGTTCGTCAATGTGAACGTGACCTCCGAGCCCCATGAGGTGTCTGCTCTCTGGTTCCTTTGGTATGTCAAGCAGTGTGGAGGCACCATGAGAATCTTCTCTACCACCAATGGAGGCCAGGAGCGCAAGTTTGCCGGAGGTGCCAATCAAATCAGTGAGGCGATGGCGAAAGAGCTGGGTGAGCGCGTGAAGCTGGGCAGAGCTGTCTACAGCATTGACCAGACTGGAGACCTGGTGGAGGTCAGGACGGTTAATGAAGAGACATACAAGGCCAAATTTGTTATACTTGCCATACCACCAGGCCTGAACTTGAAAATCCATTTCAACCCAGAACTACCGCCTCTGAGGAACCAGCTGATTCACAGAGTCCCCATGGGCTCAGTCATCAAGTGCATGGTGTACTACAAAGAAAACTTCTGGAGGAAGAAGGgATACTGTGGTAGTATGGTTATTGAGGAGGAAGAAGCACCTATTGGTCTCACTCTTGATGACACTAAGCCTGATGGGTCTGTGCCTGCTATAATGggTTTTATCCTGGCGCGAAAATCCAGGAAATTAGCCGGCCTGACGAAAGAGGAGAGAAAGAGAAGGATCTGTGAGATTTATGCTCGTGTGCTTGGCACAGAAGAAGCGTTAAATCCTGTGCACTACGAGGAGAAAAATTGGTGTGAGGAGGAGTACTCTGGTGGCTGCTACACTGCATACTTCCCGCCTGGTATCATGACACAGTATGGCAGGGTCCTGAGGGAACCGGTGGACAGGCTTTACTTTGCAGGAACTGAAACGGCCACAGAATGGAGCGGTTACATGGAGGGGGCCGTGCAAGCTGGAGAGAGAGCCACTAGAGAGATTTTGTGTGCGATGGGAAAACTCCACGCGAGTCAAATCTGGCAGTCGGAGCCTGAATCATTGGATATCCCGGCCCGGCCGTTTGTCACCACATTCTGGGAAAGAAACTTGCCGTCTGTTGGGGGACTCTTTAAATTTATGGGCGTGTCCTCCTTCCTGGCTCTGGCCACGGCTGCAGGATTGGTCGCCTATAAGAAGGGGCTCGTCCCACATAGCTAAAGCTCCTCCCGCTTTCGCAACCTGTTCTCTGATCTGGCCTTGTGATTGTGGCATCCAATCACCTAATCACGGTCATAACTCCGCCTGGGTATGTGGCCGAGGTTACTTAAATGAGATTTGACACACAATCGCTCAGtcattgttaaaaattaatcaaGTGATTATTATGGCATAACGAGTAGCTACTAATTGTTACTGTGGGAATTGCCCTGTCAAAGAGTTCACTAACTAGCCACATTAAAGGAACCGAACCGAACGTGTGACATTCCACAATCATTCATTAcgcgtgtgagagtgtgtgcgcgtgtgtgtttttcaccAGTCTTATTGATTACCTCTGCTAATTTCAGGTGCTGTTCTCAGGAACCCGTTAATTAACCTTCCAGAAATACTGAAGTAACATTACAGAGATTAGATTATCATTTAGCAatgcgttttatttcattctacaAGAGACTTTTTGTGAATATCTTCTCCACATCACAACACAGAAGCCGTATTAGCTTCAGCACAATTCACTATATCATTCACGAGAGAAGCAGAGGCTGTTCATATCACATTAGTTATTGTTTCTCAACTTACAAATTATATGGCAATTAGTACGTGTCTGGTAGCACGGCGAAGTAAAGTCTGTCAGTCATAGAGAGCTGATTCGAAGGTTGTCCCAGTGTTTTGTGTCGTTTCTAAAAGCTGCTGTGTGATTGAATCATATGAAAGCATTTGAATGTACTTTTACgtagttgattttttttcatgtaacaGACCAGTGTATACTtgaaatttgaatttgtttttgacATGCATTGATTTTCAGCCATCCGCTGTTTAACAGTTCTCTAATTCCatagtatattattaatagtaaaatataaatgtaatgttaatttgTAGAGAAATGTAAAACCCTTTTATGTCAAtgatttaagtttttttcttttttttctcccatctACCCATcttgtgatagatagatagatagatagatagatagatagatagatagatagatagataggtgcAAGTGAAAAGTGTCCCTCTCACCTTTGTAGAAGTAACCTGtgcaatattatttacaaaacaattataaCATTATGTATGGTGATTCACTCAAGTACATGGCATTCTAACACACTTCAGTTCTTTAATCATATCTAGCAAATTATCAAATCCTATATATAATTGCAGTTAACTGAAAAGGAGGTTAGGCCCCAGGCAGACAGATTAGagaatgaaatgtattatgTGTGTAAACCTGAAGTGTGTACATTTTGTTGTTCCAAAGATGCGTTGTAAACTGTTGTTTGTGGTGCCTTAATCTGATGTAGTATTCCTCATTTCTCAAGTGCCTCTGTGCTGACGAGCTCCTCCAGTCTTGAACATTGTCTCTGGGTCAGTCACTGGCTGCTTTAGGTGATGCTTTCTAAAACGAGCTCCTTTCACAAGAACAGGAAATAGAATTTTGGTCGAAGATTTGTGAAGCTCTTTGACCGATAAAATCTGCATTTAAGAACCATTCAAAAACCCACCGCTCTACTTTCCAGCATACGATGGAAAGCTTTAACAGCCGCTTCCAGAAGAAGAAGCCACTGATGATCCAGGACTGACAGAATCAGAGGCAAAGCCACTCCTGACTGTTGACTGTAATGTTTGATAAGAAAGCTTTCTATCTGTGACCTACATCTTGGTTAGAGTCTGGTCCACTGTGAACTTAGTAATGATGTGGTGACACTTTTGTCCTGACATGTTGTATTTGCTGTAACTCCTCCACCTGGTGTGCTAGTGAAttgtgcctctgtgtgtgtgtgtgctgctaaTGCTTTTCCCGAAACCACATAACATGGCGCTGTGTACCTGATCTGTCGTCACCTGCTCCGGTTTGCATAGCTGCCCTGCTCCGATCAGGCCCCTTTGTCTGATTTTGTGTGCGTATCACAGTCTCCAATGGTCTAGTCTTGTAATTGCAATATTTGATCTCTTTGTACAAATTCAACGACTAAGCTGATAATAAAAACGTGGGATTCACCACCA

Function

GO:

id name namespace
GO:0042402 cellular biogenic amine catabolic process biological_process
GO:0042135 neurotransmitter catabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0006584 catecholamine metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005741 mitochondrial outer membrane cellular_component
GO:0008131 primary amine oxidase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU104861 lncRNA downstream 357224 16118282 ~ 16120319 (-) True G70894
XR_006251840.1 lncRNA downstream 523567 15948113 ~ 15953976 (-) True LOC122352066
TU104518 lncRNA downstream 714874 15762383 ~ 15762669 (-) True G70660
TU104479 lncRNA downstream 833267 15642259 ~ 15644276 (-) True G70633
XR_006251775.1 lncRNA downstream 839107 15628883 ~ 15638436 (-) True LOC122351574
XR_006251709.1 lncRNA upstream 100467 16605367 ~ 16631420 (-) False LOC122351188
XR_006251710.1 lncRNA upstream 100467 16605367 ~ 16617024 (-) True LOC122351188
TU104934 lncRNA upstream 105370 16610270 ~ 16610561 (-) True G70955
TU104935 lncRNA upstream 108217 16613117 ~ 16613424 (-) True G70956
TU104958 lncRNA upstream 125586 16630486 ~ 16715102 (-) True G70967
XM_043249466.1 mRNA downstream 58769 16333185 ~ 16418774 (-) True LOC122352003
XM_043249458.1 mRNA downstream 177086 16203973 ~ 16300457 (-) False LOC122351999
XM_043248026.1 mRNA upstream 4660 16509560 ~ 16515444 (-) True LOC122351145
XM_043248411.1 mRNA upstream 21625 16526525 ~ 16538075 (-) True efhc2
XM_043248169.1 mRNA upstream 33468 16538368 ~ 16540651 (-) True fundc1
XM_043248778.1 mRNA upstream 74831 16579731 ~ 16584061 (-) True dipk2b
XM_043248032.1 mRNA upstream 189854 16694754 ~ 16698639 (-) False slc35a5
TU104521 other downstream 705679 15771421 ~ 15771864 (-) True G70663
XR_006251733.1 other downstream 1078106 15389849 ~ 15399437 (-) False tmtc4
TU104362 other downstream 1171568 15303103 ~ 15305975 (-) True G70549
TU104031 other downstream 2223767 14196479 ~ 14253776 (-) True G70317
TU103993 other downstream 2537675 13938259 ~ 13939868 (-) True G70294
TU104983 other upstream 312240 16817140 ~ 16823694 (-) False G70986
TU104984 other upstream 312240 16817140 ~ 16823775 (-) True G70986
TU105258 other upstream 730972 17235872 ~ 17255491 (-) True G71118
XR_006251863.1 other upstream 2064855 18569755 ~ 18569882 (-) True LOC122352185
TU106113 other upstream 3215598 19720498 ~ 19721737 (-) False ankar

Expression Profile