RNA id: XM_043249315.1


Basic Information

Item Value
RNA id XM_043249315.1
length 5640
RNA type mRNA
GC content 0.45
exon number 33
gene id myo1b
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5463314 ~ 5521286 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTTTTCTGGGATAAGGTGATTATCACAGTGGGACTCCAGTCACCACTCCCCGTGTTCATGGAGCAGTAGTCTCAGGCTCAGTCAGTCTCTTCGTCCCTGCTCTGTTCAcgggacacacacagacaaaagcGCTGGGAAGGGGACACGAGAACCACCTCTTCCACTTCATCTAGAGCGGGACGTTTGCCTTCAAGAGTGGATTAAAAGGGAAATTTTTACTCAAGAACCGAGGGGGTGTTGTCCAAAATGGAGGTGAAGACATCACTTCTCGACAATATGATAGGGGTGGGCGATATGGTCCTCATTGAGCCCCTGTCAGAAGACACCTTCATTGAGAATCTAAAGAAGCGATTCGATCACAACGAGATCTATACATACATTGGCAGTGTGGTGATCTCCATGAACCCCTACAAGTCCCTGCCCATCTACACAGCAGAAAAGGTGGAGGAGTATCGCAACAGGAACTTCTATGAGCTCAGTCCACACATtTATGCTCTGGCAGATGAGGCCTACCGGTCCCTGCGGGAACAAGATAAAGACCAGTGCATTCTCATCACTGGAGAGAGCGGGGCAGGAAAGACAGAGGCTAGTAAGTTTGTGATGTCATACGTGGCGGCAGTGTGTGGGAAGGGCCAGGAGGTGAACAAAGTGAAGGAGCAGCTGCTTCAGTCCAATCCCGTGCTTGAGGCTTTTGGGAACGCCAAAACCGTGAGGAATGACAACTCGTCTCGATTTGGGAAGTACATGGATATTGAGTTTGACTTCAAAGGAGACCCCCTTGGTGGAGTCATCAGTAATTATCTCTTGGAGAAATCCCGTGTGGTAAAGCAGCCCAGGGGCGAGAGAAATTTCCACATCTTCTACCAGCTGCTTTCTGGAGCATCAGATGACACGCTCAaaaaactgaAGCTGGATCGAGACTTCAGCAAATATAACTACCTTAGCCTGGATTCGGCGACAGTCAATGGCCTGGACGATGCTGCCAGTTTCAGAACAGTCAGAAATGCTATGCAAATTGTGGGCTTCATGGAGGATGAGGTTCAGTCAATACTGGAGCTGGTGGCTGCTGTTCTCAAACTGGGAAATATCGAGTTCAAACCAGAGTCTCGTTGCAACGGCTTTGATGAGAGTCGGATCAAGGACAAGAACGACCTGAAAGAGATGTGTGAGCTGCTGGGCATTGAGCAGTCTGTGCTGGAGAGAGCATTCAGCTTCCGTACTGTGGAGGCCAAGATGGAGAAGGTGTCCACCACACTCAACGTGGCCCAGGCCTATTACGCTCGTGACGCTCTTGCCAAAAACCTCTACAGCCGACTGTTCAGCTGGCTGGTGAACCGAATCAATGAAAGCATCAAGGCTCAAACCAAAGCACGCAAGAAAGTAATGGGAGTCCTGGATATTTATGGTTTTGAAATCTTTGAGAATGGAGATAACAGTTTTGAACAGTTCATCATCAACTACTGCAATGAGAAGCTCCAGCAAATCTTCATCGAGCTTACTCTCCGAGAAGAGCAGGAGGAGTATGTCCGTGAGGGTATTGAGTGGACCAACATTGAGTATTTCAACAACGCCATCATATGTGATCTCATTGAAAATAACAAAAATGGGATTTTGGCCATGTTGGATGAGGAGTGTTTGAGGCCAGGCACAGTGACAGATGAGACTTTCCTGGACAAGTTGAACACAGTTTGTGCTGAACACCAGCATTTTGAGAGCAGACAGAGCAAGAACTCAAAGTTCCTCACAGACCACAGCTTACCACACAACTGCTTCCGCATCCAGCACTACGCTGGCAAGGTGCTGTATCGGGTGGAGGGATTTGTGGACAAAAACAATGACCTCCTGTACAGAGATTTATCCCAGGCCATGTACAAAGCCAATCACAGCCTGATAAAGATTCTCTTTCCTGAGGGAAACCCAGCTAAAGTGAACCTCAAGCGGCCCCCCACAGCTGGATTCCAGTTCAGAGCCTCAGTTGGAACGCTAATGAAGAACCTGCTGACCAAGAACCCCAACTATATCAGGTGCATCAAACCCAATGACAAGAAAGCAGCCCACATTTTCACAGACTCACTAGTGTGTCACCAGGTGCGCTACTTGGGTCTGATGGAGAATGTACGCGTAAGAAGGGCTGGCTATGCTTTCCGCCAGGCTTATGAGCCCTGTCTGGAGCGCTACAAGATGCTCTGCAAACAGACCTGGCCCCACTGGAAGGGTCCAGCCAGGGAGGGTGTCGAGGTTCTCCTGAAAGATCTGCAGGTTCCTGCTGAGGAGTTTGCCTACGGACGTTCAAAGATTTTCATCAGGAACCCAAGAACGCTCTTCTTCTTGGAAGAGAAGAGGAGGCAGTGCCTAGAGGATCTGGCTGCACTCATCCAGAAGATCTACCGTGGTTGGAAGTGCCGTACTCACTTTCTCCTGTTAAAGAAGAGCCAGGTGGTGGTGGCCGCCTGGTACCGAAGATTTGCGCAACAAAAGAAGTACCAGAACATCAGATCCTCTGCCTTAGTGGTTCAGTCATTCATCCGAGGATGGAAGGCCCGGAAACTTCTGCGTGAGCTGAAACACAAGAAGCGTTGCGAAGAGGCCGTCACAACTATTTCAGCCTACTGGCATGGCACTCAGGCTCGCTGGGAACTGCGGCGTCTTAAGGAGGAGGCACGCAATAAACACGCCGTGTCTGTCATTTGGGCAGCTTGGCTTGGAACTAAGGCTCGGAGAGAACTGCAGCGCTTAAAGCATGAAGCTCGCAGTAAACAGGCCGTGTCTGTCATTTGGGCCTGCTGGCAAGGAACTAAGGCACGTAGAGAGCTGAAATGCTTGAAGGAGGAAGCCAGGCGTAAGCACGCCGTCGCGGTCATTTGGGCCTACTGGTTGGGACTAAAGGTTCGTCGGGAATATAGGAAGTTCTTCAGAGCTAATGCTGGCAAGAAGATCTATGACTTCACTGTCCAGAGAATTatgCAGAAGTACTTCATGGGCTTAAAGAAAACAATGCCTTCCATGTCACCAGTCGACAAGAGCTGGCCAGCTCGCCCCTACAGTTTCCTGGATGGGACGCATCAGGAGCTCAGAAGGATTTTCCATCTGTGGAGGTGTAAGAAATACCGCAGCCAGTTCACAGAAGAGAAGAAGGCTACCTACGAGGAGAAGCTTGCGGCTAGTGAACTCTTCAAGGATAAGAAGGCCTTGTATCCTAACAGTGTGGGGCAACCTTTCAAAGGAGACTATGTGGAGATAACCAAAAACCCAAAGTACCAGAAGCTCAACAGCTTGGTAGAGGATAAAGTTCTGCTTGCAGATGTCGTCAGTAAAATAAACCGTGCCAATGGCAAGGGAGCTCCAAGAATTTTCCTCCTGACAAAGAAGAGCTTGGTTCTGGCTGATCAGAAGACGGGCCAGGTGAAGGCCAGCGTTCCCCTGCTGGACCTCAGCAGTGTTTCTGTGAGCACACAGAGCGACGGCTTTTTCGCCCTCAAGCTCAAAGAGGGTTCTACATCTGCAGCCAAGGGTGACTTCCTGCTGAGCAGTGATCGATTGATTGAGATCATCACCAAACTTCATTGCATTGGTGCCGCTTCAGCTGACAGAAACCAAATCAATATCGATATTTCAGATGAGTTCTTAGTGCAGTTCAAGCAGGACAAAGTGTGTGTAAAATTCATCCAGGGTACACCAAAGAACGGCAATGGTGTTGCCTGCAAACGTAAAAACAACCGTCTTCTGGAAGTGTCTGTTCCGTCACCGTAAGGAGCGATCAGCTCGGCCCACTGAGGGGTGTCATCTCTGAGATTCGTCACTCTCCCCCAATCCCGTAATGATCGTGCAATTATGTTGATCCTTTTATTGATCCTGAATCTGAATAGTCAAATAAGCAGCTTTTTGGCACCAAAACTACTACTACTTTTGAAAGTGGGGTGAAAGTACATAATTCTCTCTTCCCAGTTTGTGGACTGATCAGAACTagtctttttatttgaaataacaatAACCATTATGATTACAGTGAAATGCTTTGAGGCTGGAAATGGTCGAATAAGCGCTTGGTGAGTCTCTGCTCATGCTCTGCTCAGCAATAGCCATGTCTCTGAACTATTGTGTTTGCATGAGCCTCTTGCTGGGAGAAACTTTGTAAATAGAGATGCCGAAGGGTATTGTCGGGCTCCTAGAAGGATGTTGAAAAGCTACAAAATTTAAGATTGCACTTTTTCACTAGGGTGGTGGTCAGGAAAGGCTGGTTGGttggtttgtgtttatttttctgttctattctcATCTTGTGTTTCTAGTGCAGAACAgtcttttattgaaaaataaaacacattttgccaAATTGTAAGGCATCTTGCGATCCAAAACCTTGTGCCATTTAGCTGTTCCTCCCCAGGAGAAAGACATTATCTTgtatacactttatttataaGCCAAATAATAATGATTCTTTTCAGTTTCATGATAAATGCCAAACAATATCATTTTAAGTCCTGCTTTTTCACatgtattatgtttataaatGCTTGCTCAATTCATTACATTAAATCAGGGTATTATCATGGAAACCTCCCGCTTCCCTAGTTTTAGCATGTCACTGAAATACCTGcatcataaatatattcatgcaggGAATCGCTTGAATTCATGGGGCTCAAATAACAATCGTCGCCCTGCATTTATAATGAATCTCCAATGCTGTAAAGATCTTCTCACATCTGGACTGACTTAGACCAGTAGTCAAGACAACTGGTGAGCGCTTGTTTCAGAAGGCCTCACAGAAGAAAAACTGACGCTAACAACCCAAACGCTGGTACGATCTTTGCCAAGTCCGCTTCAGTCAGTCCTTTTACTTAAAGCCGCATGTATATGAGCTGTAGAATTCACGTGGACCTTGTAAGGAAGGAGGCTAATAATAGTAGGTGATATGTGTTGTCCTATAGCTGTATCTTGGCAAAAtctatatgcttttttttgccaCTGGAATGTGGGctgcatcattttatttttggcttgCTCACATCtgctaataataaatgcagtgtttttcttAAGGTCtgaccaacatttttttttttttttttttcaagagcGCAAACAGCCATGCATTCATTGGACGCAAGGCAAACAATACACATTGCTTAAGTATATGTTGTTTACTAAGATCGTTGATGATAATTTTTCAGTCATATTTAATGTGATATTTTCTCGCATTGTTTTAGTGGACATTTTGTACACCTGAACTTTTGAAGACAAGGCCCGCCAAAATAACTTCTCTGCTTCTCCTTCAGTTCCATGATGCTTATTGAtgtgtatttgtaattttacagtaaaagaaTAACTAGTTTAGGGGAGTGGATTATCATCATCTTCAGTACAGGACATTTGTGGAAGCTgaattactttattatataGAATTCTGCATCTGTCTTTCATGCAGTAAGCTCTTGGTTCTCCTCTTCATTGTCAGGAGTTTGAATTGAAAGAGGAAAATAATTGTATGCATTGTTGTGTGCCTAAATGTAACCTGTTCTGAAAGACATGAAAACATggaaatgtttcattaaataataattgtaataaatgacaagtaatctttctttctttctttttaaattaaagcaataaataaatgactttggATAATCA

Function

GO:

id name namespace
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0003774 motor activity molecular_function

KEGG:

id description
K10356 MYO1; myosin I

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU100602 lncRNA downstream 65175 5397479 ~ 5398139 (-) False LOC122351915
TU100600 lncRNA downstream 65918 5396865 ~ 5397396 (-) False LOC122351915
TU100482 lncRNA downstream 281814 5141790 ~ 5181500 (-) True G67917
TU100495 lncRNA downstream 362537 5099906 ~ 5100777 (-) True G67928
TU100488 lncRNA downstream 373921 5089182 ~ 5089393 (-) True G67923
TU100650 lncRNA upstream 194055 5715341 ~ 5715637 (-) True G68048
TU100655 lncRNA upstream 213638 5734924 ~ 5735172 (-) True G68053
TU100657 lncRNA upstream 214051 5735337 ~ 5735783 (-) True G68055
TU100695 lncRNA upstream 284654 5805940 ~ 5806327 (-) True G68082
TU100773 lncRNA upstream 523829 6045115 ~ 6047596 (-) True G68120
XM_043249331.1 mRNA downstream 63434 5396954 ~ 5399880 (-) True LOC122351915
XM_043249337.1 mRNA downstream 68767 5391353 ~ 5394547 (-) True bzw1b
XM_043249344.1 mRNA downstream 93725 5366087 ~ 5369589 (-) True LOC122351925
XM_043249346.1 mRNA downstream 93726 5366087 ~ 5369588 (-) False LOC122351925
XM_043249345.1 mRNA downstream 93801 5366087 ~ 5369513 (-) False LOC122351925
XM_043249324.1 mRNA upstream 245044 5766330 ~ 5796149 (-) True LOC122351910
XM_043249325.1 mRNA upstream 245044 5766330 ~ 5794319 (-) False LOC122351910
XM_043249323.1 mRNA upstream 245044 5766330 ~ 5794318 (-) False LOC122351910
XM_043248538.1 mRNA upstream 352307 5873593 ~ 5874656 (-) True LOC122351461
XM_043248540.1 mRNA upstream 353383 5874669 ~ 5875367 (-) True LOC122351462
XR_006251815.1 other downstream 93725 5349955 ~ 5369589 (-) False LOC122351925
TU100497 other downstream 354927 5105894 ~ 5108387 (-) True G67930
TU100475 other downstream 433839 5028926 ~ 5029475 (-) True G67912
TU100470 other downstream 448501 5010513 ~ 5014813 (-) True dbi
TU100469 other downstream 448579 5010513 ~ 5014735 (-) False dbi
TU100767 other upstream 398471 5919757 ~ 5922820 (-) False LOC122351463
TU100782 other upstream 521989 6043275 ~ 6043925 (-) True G68124
TU100850 other upstream 578061 6099347 ~ 6099883 (-) False LOC122351979
TU100887 other upstream 725614 6246900 ~ 6261069 (-) True G68188
TU101110 other upstream 1549699 7070985 ~ 7148620 (-) False LOC122351350

Expression Profile