Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043249401.1 |
| length | 5375 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 14 |
| gene id | gli2a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056707.1 |
| NCBI id | CM032076.1 |
| chromosome length | 26426558 |
| location | 18113553 ~ 18179225 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0021523 | somatic motor neuron differentiation | biological_process |
| GO:0042694 | muscle cell fate specification | biological_process |
| GO:0032835 | glomerulus development | biological_process |
| GO:0001756 | somitogenesis | biological_process |
| GO:0007517 | muscle organ development | biological_process |
| GO:0031290 | retinal ganglion cell axon guidance | biological_process |
| GO:0055002 | striated muscle cell development | biological_process |
| GO:0031018 | endocrine pancreas development | biological_process |
| GO:0042476 | odontogenesis | biological_process |
| GO:0048557 | embryonic digestive tract morphogenesis | biological_process |
| GO:0021634 | optic nerve formation | biological_process |
| GO:0048855 | adenohypophysis morphogenesis | biological_process |
| GO:0048618 | post-embryonic foregut morphogenesis | biological_process |
| GO:0009953 | dorsal/ventral pattern formation | biological_process |
| GO:0050767 | regulation of neurogenesis | biological_process |
| GO:0008015 | blood circulation | biological_process |
| GO:0070935 | 3'-UTR-mediated mRNA stabilization | biological_process |
| GO:0008045 | motor neuron axon guidance | biological_process |
| GO:0021508 | floor plate formation | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU105387 | lncRNA | upstream | 83005 | 18028361 ~ 18030548 (+) | True | G71221 |
| TU105314 | lncRNA | upstream | 471115 | 17641910 ~ 17642438 (+) | True | G71167 |
| TU105308 | lncRNA | upstream | 505723 | 17607512 ~ 17607830 (+) | True | G71162 |
| TU105277 | lncRNA | upstream | 772636 | 17340700 ~ 17340917 (+) | True | G71133 |
| TU105276 | lncRNA | upstream | 772984 | 17340342 ~ 17340569 (+) | True | G71132 |
| TU105571 | lncRNA | downstream | 359255 | 18538480 ~ 18538700 (+) | True | G71331 |
| TU105573 | lncRNA | downstream | 361658 | 18540883 ~ 18541336 (+) | True | G71333 |
| TU105574 | lncRNA | downstream | 364549 | 18543774 ~ 18543998 (+) | True | G71334 |
| TU105770 | lncRNA | downstream | 568686 | 18747911 ~ 18892052 (+) | True | G71442 |
| TU105772 | lncRNA | downstream | 637913 | 18817138 ~ 18892052 (+) | False | G71442 |
| XM_043249584.1 | mRNA | upstream | 56809 | 18049032 ~ 18056744 (+) | True | inhbb |
| XM_043249585.1 | mRNA | upstream | 56810 | 18049035 ~ 18056743 (+) | False | inhbb |
| XM_043248086.1 | mRNA | upstream | 66603 | 18040897 ~ 18046950 (+) | True | si:dkey-3d4.3 |
| XM_043248085.1 | mRNA | upstream | 66603 | 18040933 ~ 18046950 (+) | False | si:dkey-3d4.3 |
| XM_043248087.1 | mRNA | upstream | 67214 | 18040931 ~ 18046339 (+) | False | si:dkey-3d4.3 |
| XM_043249403.1 | mRNA | downstream | 6507 | 18185732 ~ 18196303 (+) | True | slc15a2 |
| XM_043249404.1 | mRNA | downstream | 26423 | 18205648 ~ 18240718 (+) | True | slc49a4 |
| XM_043249360.1 | mRNA | downstream | 189518 | 18368743 ~ 18412641 (+) | True | pdia5 |
| XM_043249361.1 | mRNA | downstream | 189518 | 18368743 ~ 18403105 (+) | False | pdia5 |
| XM_043249667.1 | mRNA | downstream | 236958 | 18416183 ~ 18425068 (+) | True | sec22a |
| XR_006251816.1 | other | upstream | 164246 | 17736006 ~ 17949307 (+) | False | lrp1bb |
| TU105274 | other | upstream | 773931 | 17339127 ~ 17339622 (+) | True | G71130 |
| TU105185 | other | upstream | 907048 | 17203797 ~ 17206505 (+) | False | jam2b |
| TU105078 | other | upstream | 1194263 | 16916761 ~ 16919290 (+) | True | si:ch211-218d20.15 |
| TU104753 | other | upstream | 1363858 | 16745899 ~ 16749695 (+) | False | mpc2b |
| XR_006251864.1 | other | downstream | 367935 | 18547160 ~ 18547282 (+) | True | LOC122352186 |
| XR_006251866.1 | other | downstream | 369256 | 18548481 ~ 18548607 (+) | True | LOC122352188 |
| TU105623 | other | downstream | 371053 | 18550278 ~ 18552882 (+) | False | clasp1a |
| XR_006251851.1 | other | downstream | 432770 | 18611995 ~ 18619387 (+) | False | tfcp2l1 |
| XR_006251852.1 | other | downstream | 432771 | 18611996 ~ 18619387 (+) | False | tfcp2l1 |
