RNA id: XM_043249423.1


Basic Information

Item Value
RNA id XM_043249423.1
length 2327
RNA type mRNA
GC content 0.37
exon number 4
gene id dusp19a
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 22537975 ~ 22541710 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATCGAGGTCACAGAAATGTAGACGAGCATTACTAGCGAGGGAGCAACAAACCGTCTCGCAGCACGACCTCAGATTTGGAGCCTTTACGTTTCTGCCTTGGACAGCTCCACCGCAAATGTGATGCAGTCGCTCGCACAAGAGATAAAATCCTTCTCCAAATCTAATTTGCGGAAACAATGCACCAGAGTAACGAGTTTGAGCGGCAGGCGGATTATTGAGACATGGAAAGGTTCCACTGTACAGGTGGTTGAGGAAACGGTACAGCCTGAAACTCCATGTGGATATGTTCAGGATCATAACTGGGATCTTCAAGTTGGATATATTAAGCCATATCTATTACTTGGGTCACAAGACGCCGCTCATGACTTTGGTACTTTGAGGAAATACAAGGtcacacatattttaaatgttgcatacGGCGTGGAAAATGCCTTTCCTGACCTGTTCATCTATAAAACACTGAGCATACTGGATCTACCTGACACTGATATCATATCTCACATCGAGGAGTGCGCACAGTTTATAGACCAGGCTAAAGCTGAGAAGGGAATTGTACTTGTCCACTGCAATTCTGGAGTTTCGCGTTCTGTTTCGGTCGTCATTGGGTATCTGATGCTGAAGGAAAATCTGCCTTTTGGAGACACGTTTGCGCTGGTGAAGTCAGCTCGACCCGCCTCGTGTCCGAATCCAGGTTTCATGGAACAGCTGAAAAAGTTCAGACCAGAGGATGCTACACAAGCAAACGGCTTGGGTCATGATTGAACATTGTTCTACAGCTGCATCAGTGTAATGtcaaagaaatagttcaccccaaaaggaaaattctgtcatcatttaaaggaacaatccttttttttaaataaatggggTCATTCTCCACCTCCCCTGGAGTTAATAAGCTATGAGTTTTACTATTTTTGAATCCACTTAGCTGATCTCCAGGTCTAGCCGTAgcgcttttagcatagcttagcatagatcattaaataCAATTAGACCAGTCGCATCACATTCAAAAATTCCCAGATAGTTTCAtaatttttcctatttaaaacttaaactCTTCTGTGGTTGTATTGGTTACTGAGAGtggcggaaaatgaaaagcGGTTGGATTCGGTGATTTATGCTAAGCTAAgcgctatcgccagacccgcaGATTGGAGAAtcagcctatttccaaaaaaagtggagtgttcctttaaagctgGTTTTCCATTAAACAGATGGAGATATTTACAGAGAATGTCCTAGCTGCTCCTAGCTGTCCTAGCTGCTTTTTCTTACAGGGAAAGTGAATGAGGACTATGGAGACCGTTTGAGAAAGGTACCAAACATAGAAATGACAAACAGTAACATGGGTTTTTAATGATATGAAGGTcagtaaataaagacagaatttaaatttttttggtgaactgctCTTTTAAAGCCACCAGTGCTTCCATCATTGTTTCATAAATGGCTTTAGTTTAACACTTCGGAAATGTCTCACAGGtgctaaaatgacaaaaagaaaaccCTTCAGCTAGAATTTGAATTCAACTGGCTCCACAGAATGTTgagttttgaatttgaaattacAGAAAGGACAATAAGTTCTCAAcatattccatttttttttgtaattcctTCAGTTCAATTACAGATCTCATCCCTTATGCTGCTTCAGTCTAATTTCAGGAATTCACATTCAGAAGTCATTCACATCCATACACTAATATTAATAGCtgcatttcataataaattagCTTAATGTATCATACACTTTTAAGATGTGGTTAATTTTCACATTCAGCAGGTGTTTAAAATCTTCTTTCCTGATACTGACATCTTGTGGTCAACTCtcacattttgcattattattgaataaaattatttgatccatttcttttttttttatttctttttttttaaataaagactcATAGGGTTCTTTATAGTCAGTGACTTTGATAGCAACATGAACTCATTTTGTCCTCACTTGACATTTGGGATGCAAAGCTATATTTGTGCAATATAGTAACTTAAATATCAACCAAAAAGAGGGACTAGTTGAAGTATTCCTGGTACATCAAATCTTAGTTCAGTtccttttgtaattttgtaattttaattacatatttggatgtttttgtCCATATTGCATagtaatatagtttatatatagtttttttccttttttccactGTTGTGATGTGTTTTTCTGAAGGTAGAAAATTATCATCAATATTTGTGAGGATGTTTGACATGaaagtttatttcacttttagaACTTCTGGGATTAACTTTGTGGTGTAGACTGAGCCTTGATTTTAAAGTATGGA

Function

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU107338 lncRNA downstream 79217 22311078 ~ 22458758 (-) True G72535
TU107317 lncRNA downstream 92480 22297007 ~ 22445495 (-) False LOC122351746
TU107333 lncRNA downstream 92480 22297050 ~ 22445495 (-) False LOC122351746
TU107340 lncRNA downstream 227497 22307182 ~ 22310478 (-) True G72537
TU107272 lncRNA downstream 242907 22286774 ~ 22295068 (-) True G72502
TU107400 lncRNA upstream 38093 22579803 ~ 22580772 (-) True G72583
XR_006251847.1 lncRNA upstream 44034 22585744 ~ 22588251 (-) True LOC122352087
TU107436 lncRNA upstream 110792 22652502 ~ 22653575 (-) True G72605
TU107432 lncRNA upstream 116607 22658317 ~ 22658828 (-) True G72603
TU107440 lncRNA upstream 125187 22666897 ~ 22667111 (-) True G72608
XM_043249018.1 mRNA downstream 27451 22446393 ~ 22510524 (-) True LOC122351746
XM_043249180.1 mRNA downstream 53266 22482226 ~ 22484709 (-) True LOC122351832
XM_043249520.1 mRNA downstream 139322 22341408 ~ 22398653 (-) True LOC122352034
XM_043248644.1 mRNA downstream 309476 22225558 ~ 22228499 (-) True neurod1
XM_043248643.1 mRNA downstream 314309 22171463 ~ 22223666 (-) True cerkl
XM_043249029.1 mRNA upstream 56118 22597828 ~ 22610069 (-) True dnajc10
XM_043249030.1 mRNA upstream 69648 22611358 ~ 22615781 (-) True LOC122351760
XM_043249032.1 mRNA upstream 75154 22616864 ~ 22620788 (-) False LOC122351761
XM_043249031.1 mRNA upstream 75154 22616864 ~ 22620788 (-) True LOC122351761
XM_043249493.1 mRNA upstream 80348 22622058 ~ 22635997 (-) False vil1
TU107329 other downstream 26668 22459396 ~ 22511307 (-) False LOC122351746
TU107316 other downstream 230962 22299172 ~ 22307013 (-) False LOC122351746
XR_006251764.1 other downstream 314308 22171463 ~ 22223667 (-) False cerkl
TU107092 other downstream 811155 21709288 ~ 21726820 (-) True G72363
TU106614 other downstream 2034085 20489164 ~ 20503890 (-) False G71938
TU107929 other upstream 1388497 23930207 ~ 23931329 (-) True G72930
TU107931 other upstream 1414509 23956219 ~ 23960325 (-) False grb14
TU108001 other upstream 1678812 24220522 ~ 24280708 (-) False G72978
TU108002 other upstream 1689525 24231235 ~ 24280708 (-) False G72978
TU108000 other upstream 1729745 24271455 ~ 24280708 (-) True G72978

Expression Profile