RNA id: XM_043249437.1


Basic Information

Item Value
RNA id XM_043249437.1
length 7324
RNA type mRNA
GC content 0.44
exon number 9
gene id lats2
representative False

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14552182 ~ 14569134 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTCTGGAATGTTAACAATGCAGTAAGTGTCCAACTTTGTACTGCATTCTAATTCTGCCGTGAGTGGCGAGAAAATGGAGGACAATCCCATGATTTTCACTGTGTGCTTTATATGAGAGGACTTCGAAAGACGATCCCCGGGCAACAAAACACCAGACAGATAAGCTACAACTTTACTGAAGTTTAAATCAGTTCCTTGGATTAAGGTACCACTAAAATCACATGGCAAAGATGCATACCAGACTGGGATGGAACAAGTACGCAGACGTTACCCCTCACATGTCTTGGGAGGAGGGGGAGTGTGAGCCCTGAAAGGGGTGCTGGGATGTGAGTAGGCCAGCATCCAGCACGAGCCAGAGCCAAAGAGGCAGCAGCAACAAAGACGAGCGGCAACAGGAATCCTAATCTTCCCTTTGCATCTTTCCCATTGCAGCCTGTTATCTATTCAGtgtgaagAATTTGTGTGTACGGGCCGCGTTCACTCATGAGGCCTAAGACGTTCCCTGCCGCCCCATATGTGGGCAACACTCGCCAGCGCCTGCAGGAGATCAAGGAGGGACTGAAACAACCTGCAAAGCTGGTGAGCCAGGCGCTTCATGGAGGGAGCGCTCGAGGGGAGGGGGGCAGAGGTGGGGACTCTAAGGGCAAAGACCAAGCTGGAAGGCAACAACAGCTCCGGCAGCCTCAGAAGTTCAACAACTACCAAAATGCCCTGCGAGAGATCCGCAAGTCTCTATTGCCTTTTGCCAACGAATCAGGCCCGGGATCCAGCTCAGGACATCCTGGTGAAGTCAATAGGCAGATGCTGCAGGATCTTGTCAACGCTGGTTGTGATCAGGAAATGGCAGTCCGTGCCCTAAAACAGACCGGCAGCCGTAACATTGAGGCAGCATTGGAATACATTAGCAAAATGGGCTACCTGGACCCTCACAATGAACAGATTGTACGTGTCATCAAACAGACTTCCCCAGGAAAAAATGGCATGCCAAATTTAATGGACCACAGGGCGGCAATGGAGGGCACTGGGGATGGTGCAATGCCACCTTATCACCAAATGGGAGCACCACTGTATGAGGGAGCTGGTTATGGGGCTGAGGGTGAGATGACACGTGCATACATGGGTGGACCACCTGTCATGAACTACATGCCACCGCCTGCTAACCCTTCACAGGGTCCTACCATGGGAAACCCAATGGGTCGTCCTGCAAGCATGGGTGCCTACTCCACAAGCATGGCTCCCCAAAATAACCCTGGAAACCCTATGTACACCCCTGGTCCAGCCCAGCAAAAAGGCTACCCTGGTGGAATAGACCAGGCCATGATGGGCTACAGTGTGCCTGGACCACCTATGCAAATCCAGCCTCAGCCTTCGGGAGGTCCTGGCACACATTATGACTACAGGCCTCATATGATAGAAGCACCCAGCTACGGGGTAAAACGAAGTGCTTCTTTCCAGAATAAGATGACCTCACTAACATCTGAAAACTATGTTAATATGCCAGGCAAAGGAGCAATGGGCCAAAACACTGGTGGCTACCCTCCAAACTTATATCTTCCACCACATTCGCACCCACGTCAAGCCAGTCCCACCTCACACCAAGTTCACATGATGCAGCGCTCCCCTGGAGCTATGGGAGGTGAGTTTTCCGATGTTCCTCAAGGCCTCCTCACACCTTCCAGGGCCAGTCTGAATCTCGACCTCTATGAACATCACTGGCCAGGAGCCCAAGGTCCTGAGGGGACACCTCCAACCAGGCAGCCACAGGGACCCTTTAGAGGGGAGGTACGTGTCCCCAGCCGGACCAATTCTTTCAACAACCACCAGAAGGTGACAGTGAGGCAGGCATTGCCTCCCACAGCTAGTGTTGCTGGCAAACAGGATGCATCTTTGGGTCCGCCTAACACAATAACTGCAGTGACCTCTCCACCAATCCAGCCGCCTGTTAAGAGTATAAGGGTCATGAGGCCTGAGCCGAAGACAGCAGTGGGACCATGCCATCCAGGGTGGCTGAGTGCACAAGCTCAGGATGCTCCAGAGTCTCACGGATACATGCCAGATGAGACTTTTACTCTGGAGTCCAATCAAGAACACAGATGTCCTCCTCCACCCTACCCTAAAACACTGCTCCTGCCTGGATCTGGACCTGAGCCTGCATCCCTGGAGACTGGAGCCATGGGTGGATTTCAAGATGTCAATGCTACAAGTAGAACAGTCCAGAGTGCCTCAGTAGGAAAGCAAGAGGAACCAGTCTCCAAAGACAAAGTGAAGACAGGCAAAGGCGAGAAAGCAGTGAAGGATAAGAAGCAGATTCAAACCTCACCTGTGCCTGTGCGAAAAAATGCCCGTGATGAAGAGAAGCGGGAGTCACGCATTAAGAGTTATTCTCCCTTTGCCTTTAAGTTCTACATGGAGCAGCATGTGGAGAACGTGATGAAGACCTATCAGCAGAAACTCAATCGCAGGATGCAGCTGGAGCAAGAAATGTCTAAGGCTGGCCTTTCAGAGGCAGAGCAGGAACAGATGAGAAAGATGCTATACCAGAAGGAATCCAATTACAACCGACTACGACGTGCCAAGATGGACAAGTCGATGTTTGTCAAAATCAAGACACTTGGCATTGGGGCCTTTGGTGAGGTGTGTCTTACACGCAAAGTGGACACAAGCGCCCTATATGCCATGAAGACTCTACGAAAGAAAGATGTTCTGAACCGAAACCAAGTAGCCCATGTGAAAGCAGAACGAGATATCTTGGCAGAGGCTGACAATGAGTGGGTAGTCAGGTTGTACTACTCATTTCAGGACAGAGACAGCCTGTACTTTGTCATGGATTACATTCCTGGAGGAGATATGATGAGCTTGCTGATCCGTATGGGGGTTTTTCCAGAGCCCTTAGCCAGGTTCTATGTGGCAGAACTAACACTGGCCATCGAAAGTGTGCATAAGATGGGCTTCATCCACAGAGATATCAAACCGGACAACATCCTAATTGACCTGGATGGACACATCAAGCTGACTGATTTTGGTCTGTGTACTGGGTTCCGTTGGACCCACAACTCAAAGTATTACCAAAAAGGGAACCATATCCGACAAGATAGTATGGAGCCAAGTGACTTTTGGGATGATGTTTCCAACTGCCGTTGTGGTGATCGGCTGATGACTTTGGAACAGCGGGCAACTCGACAACACCAGCGTTGTCTGGCACACTCTCTGGTGGGCACTCCGAACTACATTGCCCCTGAGGTGCTTCTGCGCAAAGGATACACACAGCTGTGTGACTGGTGGAGTGTTGGAGTAATCCTGTTTGAGATGCTGGTTGGCCAGCCACCTTTCCTTGCTCCAACCCCAACAGAGACGCAGCTTAAGGTGATAAACTGGGAGAACACTCTGCAGGTGCCTCCACAAGTAAAACTGAGCCCAGAGGCAGTTGACATCATCGGTCGACTCTGCTGCTCAGCTGAAGAGCGTCTAGGAGGAAACGGAGCTGGAGAGATAAAAGCTCACCCTTTCTTTGCCGAGATGGATTTCTCTAGCAATCTTCGTACACAACCTGCTCCATACAGACCGAAGATTGCCCACCCCATGGATACATCCAACTTTGACCCTGTGGAAGAGGAGGGGGGCCCAGGGGCCTGGAGTGACAGTGGAGACAGCACCCGCACTTGGGACACCCTCTGTTCTCCTCATGGAAAACACCCTGAGCATGCCTTCTATGAGTTCACCTTCCGAAGGTTTTTTGATGATAATGGCTGTCCATTCCGTTATCCCAAGCCCCCCGAGGCAACCCAAGACCTGCCCAGCAGTAGTGGGGCTGGTGGCCTGAAACCTAAGCTGGAGGAAGAAGAGGTTCATGAAGAGGAAGAGCAAGGAGAAGGGTGTGAGCCGGTTTATGTGTGAGGATGTTGGATTGGGTGTTCATGCTGCTCTGCGTTTACCCATAGAGGACCTCGCCAGTTAACACGCTGCATCTCCTAAACATCCTTTCAACCCTACTTTTTCTTCAGGGTATTTTTGTACAGGTTAAATGCATGGAAGAACATCAAAAATAGAGTGGAGAAAGTTCcatgtgaaatgtgtttattcCTTCAAAAGCATTATGCTGTATCCTTTGCctgttaaaaatgactgaagTTCTGACCTGGGACCAAGGAATTACATGCAGCTTAGTTCATGGGGACGTTGGTGGGACTGATAAAGTTGGCTACTCTTCTATGagaacacaaaaacagatgtGTGTAGCTGCTGCTCTGTGGTTTGTCAGTCAAACCACTCTACTCTTATGGTTGGTGGGGTCAGCGTTGACTGTGCCCCATTCCTTTATTCCACTGGGGGAAAATATCCCAGTCTTACGTCATATTTTAACAATACCTTCACCTCTCGTAGCCTGGTGATGCTAACACAGCCATTCCAAACACCAGAGGTCATGGTGAGGGATCAAAAGAGAGCTGGGCTTGGGATGATAGCTCTATGGTCAGGTTGCAATTAGGAGACATGCCAAGAAAGAAACATCACAATTCTCCTCCGTAGTGCAAGCccacaaaattataaatgcatatacatgcgACATGATGTCAGTCACAACTATGgaggtttgcttttttttttttttttttttttttagtttatgaaaaaaaaccctgactTTTATAGTAAAATTCAGAAGCATTTTCTGAAGTATGGAAGACAGATTTGCAGATGTCCTACCGTGTGATCctagtcattttcatttttccaaaacaaaaatcttttaaaagattttgtgGCGCCACCAAGTGGTTCAAAGTGACACTGTCGTGCAGCTTGTTTTAAAGATTTGTCAACTTTAATGAACTGACAGTATTAGGTCACTTCTTAATGCAAAATCTGTTCAAAACATCATGCAGTATTTTCAGTTAATTCAATAATCACatcttttttgtaaatattatacagtTATACGCCTTATCAGGTCAAACGGTGCTTTCAGACAACGCAATATTGAGAATGTTTTACAGCCAGCACTTCAAGAACATGGGATTTTAAAACTCCCATTATTGTTAAAGGTTTTatataaacatcttttaaatgtcattagaAAGAAATTCAGATTTCATACATGTGGTTATaaacaatgtcaaaaaaattcacaatagggaaaattaagattttaaggagaaaattaaaaaggtcTGAACCTGCGTTTTCTTTGCTTGTGAGAAATATGCATGGTAATTCAACGAAATGCcacaaaaaacattgcaatatttttattttgcattaagtGTGTTAgtactgttttattaatttgatgacAAATTACCTGGCTTGATTTCTTGTATTTACTAAGGCTTACTATACCTGTTCCCAATAGTTGCTTTACATTCATCTGCTGCTTTAAGTGTATCTAAGATGTGCATCACACATAGAGGTTTGCTGCAGACATGCAAGTGGCCATCCAGAACAAATCAGCAGCATAACAGTTTTCAACAGCTGGGTGTCCAGCTATTTCCTTTTCTTGTTGCGCAGAAGTTTTCATATGCTTTTCATTGTATAACTCTTGTCTGCTTTATCCTTTTGCTGTTTCCCAGAATATCTTAATTGCATTTAGTTTCATAAGAAGATCTTAAAAAGTCAGACGGGtggtttttgttgtgtgtgttcatgctCATCCAGATCCACTGGAAATGATCTTGTCTGTCGCCATCAGTGAATCATTAGAacaattgcaaaaatgttttgtctttgaGGCTGCTTCTGCACCATTTCAAAGTGATCACACAGCACAGTATTATAACAAGACAGTCTATGACTGAAGTGTAAATAATACTTGGAGGCAAAAACCTTTTAAGAAGTGGTGAAAATGTGGCGAACGAAAAGACAAATGTATCTGATGGTATGACTATGTGcaatacagaaaatacattatatagttttctaaatacaataaatagcctttaaaactttaaaactgaattatgctatcttaaagtatatattatattgatttatatattttcagtatagTTTCATGACCCAATGCtgcttattgttattaatattacactATAAAGTATCATTATCATCATACTTTCATTtatactttctctctctttttgtatAAAGTGTGATTTTGATTGTCAGTATGATTGATCTGGTGTAAGACGAACTGTGTGCCTTCTAATgaatgtgtgggtgtgtgtaccACGTGCTGATCAGTATTTCAGGAGAAGATGGAAAAGGCCTTCGCTTCTTGCTCTCAGGCCGGTCCTGAGGGTGAGGGAGGGGGTGTTTTTGGTGGAATAGCctgagaaagacaaaaaaaagaagcaagaaTGAATGATTGTCGTTGGGACTCTGAAGGAGAAATGTATGGATGTCATAGCAGGATGAATATGTAAACGCTTTGTATGCATTTGATCAGTGATAAGGATTGTTTTGAATTTCTGCGAGAAGTCCATTTAATATTGTCTTTCTAAGATCTAATCATTTGTGGTGATAATGTGTCACTGCATAAAATGTTCTCTGTATTAGTTATTATCTTTCAAGCTGACTGACAATCATGTGGTTACGTGCTTGCAGTCAATATTGTCTAAAAACCTGTACGACCGCTGACTATaagagctttaaaaaaacatttgatgatgatcatttcatatttgctttatatattGTATCAGTACGATCACTCCTAAAAGTTAAGTGAAACCttaacaaacattttgtaatgttaATGTATATGCCAAGTCAAATTGGTATTGTGCCTTTGGTCCAATCAAAAAAGTTGATTGAGCTGTATGGAGTGTGAAAGCAAGTGTGGCAGATGTTTTGCTACCCCATATTCGTCAGAATGGACCACTCAGTGAAAAAGCATGAGCTTTCTATGAATCTCTCAGAGAGTCAGGTTTAGGGTTTGAATGTAATGCGTGTGCTGTGCTTAGGATGGATTCtgtgttttacttttgaaaatgttgactGACAATCTTTGACTGTATTTAGAATTGTGTGATGATGGGATTTTTCCtctaatgtatgtttttgtattttaatggaTGAATGGGTTGGGACTTTTTGACGTTTGTAATCTTTTAACTGTATTATATAATACTGTTACTAttgaacatatatttatacagatatacatattttttgtatccttttattcttatttttctcttttctgagCTAACTTTTGAACCCCCTTGTCTACAGTATTACAGACAGTATGCATTTGGATTTATATCTCATTTTTTACATGTACGTATGAATTGAGAATGTTTAAGAAATGCTTTCGctgtcctcatttgtaaatgtatatgtctaaattaaattaaacaaatcatGCTCTTTT

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0060027 convergent extension involved in gastrulation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU104075 lncRNA downstream 179508 14363039 ~ 14372674 (-) False LOC122351495
TU104049 lncRNA downstream 304854 14244287 ~ 14247328 (-) True G70332
XR_006251857.1 lncRNA downstream 363181 14173817 ~ 14189001 (-) True LOC122352120
TU104012 lncRNA downstream 627346 13924616 ~ 13924836 (-) True G70309
TU104011 lncRNA downstream 628078 13923749 ~ 13924104 (-) True G70308
TU104132 lncRNA upstream 20725 14589858 ~ 14590275 (-) True G70393
TU104140 lncRNA upstream 25130 14594263 ~ 14595342 (-) True G70396
TU104139 lncRNA upstream 25291 14594424 ~ 14595342 (-) False G70396
TU104213 lncRNA upstream 347667 14916800 ~ 14918840 (-) False G70438
TU104214 lncRNA upstream 347667 14916800 ~ 14918840 (-) True G70438
XM_043248391.1 mRNA downstream 729 14521398 ~ 14551453 (-) True xpo4
XM_043248392.1 mRNA downstream 5482 14521398 ~ 14546700 (-) False xpo4
XM_043248402.1 mRNA downstream 30841 14518928 ~ 14521341 (-) True eef1akmt1
XM_043248400.1 mRNA downstream 45228 14496786 ~ 14506954 (-) False cryl1
XM_043248401.1 mRNA downstream 45235 14496786 ~ 14506947 (-) True cryl1
XM_043249440.1 mRNA upstream 677 14569810 ~ 14573059 (-) False LOC122351989
XM_043249442.1 mRNA upstream 677 14569810 ~ 14573037 (-) False LOC122351989
XM_043249441.1 mRNA upstream 677 14569810 ~ 14573037 (-) True LOC122351989
XM_043249443.1 mRNA upstream 5662 14574795 ~ 14578272 (-) True ska3
XM_043249444.1 mRNA upstream 5662 14574795 ~ 14578261 (-) False ska3
TU104031 other downstream 298406 14196479 ~ 14253776 (-) True G70317
TU103993 other downstream 612314 13938259 ~ 13939868 (-) True G70294
TU103924 other downstream 738855 13807822 ~ 13813327 (-) True G70261
TU103524 other downstream 1056537 13473140 ~ 13495645 (-) False gypc
TU104362 other upstream 733970 15303103 ~ 15305975 (-) True G70549
XR_006251733.1 other upstream 820716 15389849 ~ 15399437 (-) False tmtc4
TU104521 other upstream 1202288 15771421 ~ 15771864 (-) True G70663
TU104983 other upstream 2248007 16817140 ~ 16823694 (-) False G70986
TU104984 other upstream 2248007 16817140 ~ 16823775 (-) True G70986

Expression Profile