RNA id: XM_043249448.1



Basic Information


Item Value
RNA id XM_043249448.1
length 552
RNA type mRNA
GC content 0.51
exon number 3
gene id crygs3
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14092927 ~ 14093892 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATGAAATTAGCCTCAAACATGGACAGAAAGGGAAAAattttcttttatgaGGACAAAAACTTTCAGGGACGTTGTTTTGAGTGCAGCATGGACTGCCCAGAGCTGTCGTCCCACTTCAGCCGCTGTAACTCCATCCGAGTTGAAAGTGGGGCCTGGGTTTTGTATGAACGTCCAAACTTCATGGGCTGCCAGTACATCCTAACCAGGGGAGAGTATCCTGACTACCAGCACTGGATGGGTTTCAATGAATCTGTAAGGTCCTGCCGCATGGTGCGAAATCATACTGGCAAATTCCATATCCGTCTGTATGAGCGGCCTGACTTCCAGGGTCAGATTATGGAGTGCGGTGAGGACTGGCCCTCTCTCTATGACCGCTTCCGTCACCGTGAGATACAGTCCTGTAATGTTCTGGATGGGGCCTGGGTCTTCTATGAGCATCCTAACTTCAGGGGACGTCAGTATTTGTTGGAGAGAGGCGAGTACCGCCACTTCACTGACTGGAGTGCCATGCATCCTACTGTCGGCTCCATCCGCCGTGTTCAGGAGTTTTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU104012 lncRNA downstream 168091 13924616 ~ 13924836 (-) True G70309
TU104011 lncRNA downstream 168823 13923749 ~ 13924104 (-) True G70308
TU103897 lncRNA downstream 181074 13881750 ~ 13911853 (-) False rif1
XR_006251857.1 lncRNA upstream 79925 14173817 ~ 14189001 (-) True LOC122352120
TU104049 lncRNA upstream 150395 14244287 ~ 14247328 (-) True G70332
TU104075 lncRNA upstream 269147 14363039 ~ 14372674 (-) False LOC122351495
TU104117 lncRNA upstream 383440 14477332 ~ 14562992 (-) True G70382
TU104132 lncRNA upstream 495966 14589858 ~ 14590275 (-) True G70393
XM_043248406.1 mRNA downstream 6156 13985015 ~ 14086771 (-) False LOC122351370
XM_043248407.1 mRNA downstream 19118 13985015 ~ 14073809 (-) False LOC122351370
XM_043248405.1 mRNA downstream 19118 13985015 ~ 14073809 (-) True LOC122351370
XM_043248408.1 mRNA downstream 107765 13974047 ~ 13985162 (-) True etv5a
XM_043248409.1 mRNA downstream 107766 13974047 ~ 13985161 (-) False etv5a
XM_043248566.1 mRNA upstream 2983 14096875 ~ 14097614 (-) True crygs4
XM_043249650.1 mRNA upstream 77897 14171789 ~ 14172518 (-) False LOC122352116
XM_043249649.1 mRNA upstream 77897 14171789 ~ 14172518 (-) True LOC122352116
XM_043249256.1 mRNA upstream 95712 14189604 ~ 14190624 (-) True LOC122351874
XM_043249257.1 mRNA upstream 100791 14194683 ~ 14195492 (-) True crygm1
TU103993 other downstream 153059 13938259 ~ 13939868 (-) True G70294
TU103924 other downstream 279600 13807822 ~ 13813327 (-) True G70261
TU103524 other downstream 597282 13473140 ~ 13495645 (-) False gypc
TU103526 other downstream 597282 13473140 ~ 13495645 (-) False gypc
TU103179 other downstream 1106949 12985124 ~ 12985978 (-) True G69757
TU104031 other upstream 102587 14196479 ~ 14253776 (-) True G70317
TU104362 other upstream 1209211 15303103 ~ 15305975 (-) True G70549
XR_006251733.1 other upstream 1295957 15389849 ~ 15399437 (-) False tmtc4
TU104521 other upstream 1677529 15771421 ~ 15771864 (-) True G70663
TU104983 other upstream 2723248 16817140 ~ 16823694 (-) False G70986

Expression Profile