RNA id: XM_043249516.1


Basic Information

Item Value
RNA id XM_043249516.1
length 3574
RNA type mRNA
GC content 0.41
exon number 20
gene id morc3a
representative False

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14884111 ~ 14898125 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GAGGATGGCAGTGCAAACAGAGAGAGGAATCCCGCTCAGTGCggtcgttgattggtttaaaaacaacccgccgatttaggctatgtaacatatttttgctgcatacatgccaaaacagatgtaaacatggataaatggTTGACAACGGGATCGCTGAAAAGGGAAAATACTTCATCTACAATTAAATCCAAAGTTCCTTCACACCAACTCCACCAGCCACACCTGGCCCTTCAGTGCTATTGCAGAGCTGATAGACAATGCTTATGACCCAGATGTAAGTGCCAAAACGTTTTGGATTGATAGGACATTAATCAGAGGTCAAGACTGTCTAATTTTCATGGATAATGGAGCAGGAATGAATTATGATAAGATGTACAAAATGCTCAGTTTTGGCTTCAGTGACAAGGAGGCTATAAATGGCCATGTCCCTGTGGGCCTTTACGGCAATGGATTCAAGTCTGGTTCTATGCGCTTAGGAAAGGATGCCCTTGTTTTTTCCAAGAATGGAAAGTCCATGTGTGTGGGCCTTCTGTCCCAGACGTATCTTCAGGAGATACATGCAGAGAATGTCGTTGTACCCATTGTCTCATTCGAACGCATTCGACACTCATTCCGACCTGACTCACAACATGAAAAAAGTCTTCAAGATATCCTGCGCTACTCTCTGTTCCATACAGAGGCGGATCTTCTCTGTGAACTCAATGCCATCAACGCACACTTTGACTCCGAGACCAATGGAACACGAATCATCATCTGGAACCTCCGCAAAACATCCACAGGTAAATCGGAGTTTGACTTCGACACAGACCGCTATGACATCCAGATTCCATCTGAAGTATTTGAGAGTGAAAAGGAGAAATACAAGCAACCGTTTCACTCATTTCAGTCAAGTCCAGAGAGCGACTTCTCTCTTCGGgcatACTGTAGTATCTTATACTTGAAGCCCAGAATGCAGATTATACTTCGTGGACAGAAAGTGAAAACCCAGCTGATCTCCAAAAGCCTGGCAAACATTGTCAAGGATAAATACAAACccaattttctaaatAGAGAAAACGTTCCCATCATATTTGGCTACAACACCAAGAGCAAAGATTATTATGGTGTCATGATGTACCACAAAAACAGGCTTATCAAAGCCTATGAACGTGTTGGATGTCAAACCAAGGCAAATGAAAAAGGAGTTGGAGTCATTGCAGTGATTGAGTGTAACTTCCTTAAGCCAACACACAACAAACAGGACTTTGACTACACAGACGAGTACAGGAAAACCATGAACATTTTGGGAGTGAAACTGGAAGAGTATTGGAAAGCAATCTGCCATAAGAAGGGATTAAACACTACAGTACCTATGGAGGATATCCCGAAGCGTCCTGATCAGAACTGGGTTCAGTGTGATGAATGTATGAAATGGAGGAAACTTCCAGATGGCATTGACATGAATAAGCTCCCAGAAAAATGGTTCTGTCGATTTAATCCAGACCCCCAGTTCAGGCGATGTGAAGATCCAGAAGAAGCTGAAGATTCTGAAGATGAAAATTCAGACTGCCTGAAAGAATACAAACAGCATGAGAAAAACCTCAAAAAACAGCAGGAAGAGCAAAGAAATCAGTTGCTCCTTCAACATAATGAGGATCTGAAAAGGAAAGTTGACCGTGTGCGTCAACTGTaccaaaaaGACCCTTCCTCATCCAGATCATCTACAGTTTCTTTGACAGAAATGAGCCCTTTCAACTCAGTGACCCTTTCACAGTCTGCTTCTAGCCCCTCAGACAGAATGCCTGTCATTTCAAATGTCATGTCCCTTTCCACTTCTAAAAGAAAAAATAGAAGTCTTGGTTTATCCCAGAGCCAAACTGTAAAAAGAGCGAGATCATTATTTCACTGCTGTAACGGCACACCAGACAGCCCATCAACATCCGCAGCTACATCCGATGTCATAACCTCAGCTTTGGAGAGAGCAGACAAAGTTGCTGAAAACAATGTAGAGAGCAGCAAAATCGATGATGTTGTTATCGATGAGACCCACAGCACACCAAGACCCAAACCCTTTGACCTTTCTAATGTGAAGATGGAAGAAAAGAACAGTGAAGATGCACTAGGATTATATATGGAGTGCACTGAGCGAACTTCCGTGGAAACTGAAAACACTAGTAAGGAAAGAATGGAGCCATCGACTTCCAGCGGCCAAACAAGTATAACAACCCAAACAGAGCATTTTATTGTGAAGACAGAGAAAGATGAGCAGACAAGAATGGAAGAAGGTGAGATCAAGAAGGAAGAGATTGAGAATGATGTGTCAAGGATGGAACAAAGTGCTACTAAGCTGAAAAGCACTAATGATACTGAAACCGAAGGCCCCAATGACATAGAGAGATGTAGTAGCACAGATATTTACAAACCAAATTTTGACAAAGAAAAGGagatactgaaaaaaatcagttttgaacAACATGCAAAGTCAGATGGAGAAATAGATCTTATGCCAACACATGAAGCACAGAAGCAACAGGATAACCTGCTAGATCTCCTAGAGGCCACAGCCCAGGAGAGAGATGAACTCAGAAAGCAAGCTCAGGAACTCAGGAATCTCACTATAAAGAAGGACTGCAGCCATGAGAGCATCCAGACAGATCCATCAGGGGAACAGCGATATGAGACTCTCTACTTGAAGGCCACCCAGTCCATCAACAAGCTTACACAAGAGAGGGATGAGCTTAAAAGACAACATGAGGTGTTGGTGCAATTCAAAGCTGAAAAAGAGGCACAGGATGAGACTAAGAAGGAAAAATCATCACCGAGCGTTCGTGAAAATGAAGATGATGAAATGGCTCTTCAGTTGGACTCTCTTCTAAGAGAGCTGGACAGTCGCAACACAGAATGCAACGAACTAAGAATTAAGTTGGAGAGCTTGGAGCAGGAGAAAGCTCACAGCGAACAGTTGCAGAAGGAAGTAGAAGAGCTGAGGAAACAAAAAGAGGAGTGGATCAAGACGAGAGCGCAAGAGACCTTGAAGGGAGAGAACACAGTGACATCGGCCAAGTTGAGAGAGCTGCGGTTCAGCATCGGCCGTTTATTGGTCACTTTTGTTCCTGCCTTGGACCTCGATCAAGTGAATTATGACTGTGAGGTCATAGATGAGATTTTAAACCAGGTCTTGCAGGAGATTTCCACCTCTTAGATCAACTTTACTTAAAGCCAGTTGCCAAAGAGTTCAGTCTAGGGTTGTTGTTTTGAGCATGgcaacaaaatgttcaaattttaTTCGACTCTAAAACTTGCCATTCTTattgcaagttttttttatacacattttaacacattttcgTTCTTTTAGTTActggataaaaaaataagttaattcAAGAGTAATATTTCATGAaagattttatgattttatagcttgcaaatattcttttttttaatacaccgtaattcttttaattgtgagtggataataactgttttaaatgctACTCAATTTGTGTACAGAAGCTTCTGTGTATAATATTGTAcataatgctgtttttgaaaaacaaagttaattgctaaataaattttatatttgtttaaa

Function

GO:

id name namespace
GO:0005524 ATP binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU104140 lncRNA downstream 288769 14594263 ~ 14595342 (-) True G70396
TU104139 lncRNA downstream 288769 14594424 ~ 14595342 (-) False G70396
TU104132 lncRNA downstream 293836 14589858 ~ 14590275 (-) True G70393
TU104117 lncRNA downstream 321119 14477332 ~ 14562992 (-) True G70382
TU104075 lncRNA downstream 511437 14363039 ~ 14372674 (-) False LOC122351495
TU104213 lncRNA upstream 22683 14916800 ~ 14918840 (-) False G70438
TU104214 lncRNA upstream 22683 14916800 ~ 14918840 (-) True G70438
XR_006251854.1 lncRNA upstream 43007 14937124 ~ 14942863 (-) True LOC122352110
TU104296 lncRNA upstream 81295 14975412 ~ 14981853 (-) True G70494
TU104307 lncRNA upstream 119240 15013357 ~ 15273029 (-) False G70503
XM_043249517.1 mRNA downstream 6455 14875492 ~ 14877656 (-) True vtcn1
XM_043248126.1 mRNA downstream 9419 14868759 ~ 14874692 (-) True trim45
XM_043248895.1 mRNA downstream 22019 14795431 ~ 14862092 (-) False man1a2
XM_043248244.1 mRNA upstream 107347 15001464 ~ 15006670 (-) True klf5b
XM_043249094.1 mRNA upstream 262987 15157104 ~ 15161278 (-) True gpr18
XM_043249093.1 mRNA upstream 270182 15164299 ~ 15170670 (-) False gpr183a
XM_043249091.1 mRNA upstream 270182 15164299 ~ 15170496 (-) False gpr183a
XM_043249092.1 mRNA upstream 270182 15164299 ~ 15170119 (-) True gpr183a
TU104031 other downstream 630335 14196479 ~ 14253776 (-) True G70317
TU103993 other downstream 944243 13938259 ~ 13939868 (-) True G70294
TU103924 other downstream 1070784 13807822 ~ 13813327 (-) True G70261
TU103524 other downstream 1388466 13473140 ~ 13495645 (-) False gypc
TU104362 other upstream 408986 15303103 ~ 15305975 (-) True G70549
XR_006251733.1 other upstream 495732 15389849 ~ 15399437 (-) False tmtc4
TU104521 other upstream 877304 15771421 ~ 15771864 (-) True G70663
TU104983 other upstream 1923023 16817140 ~ 16823694 (-) False G70986
TU104984 other upstream 1923023 16817140 ~ 16823775 (-) True G70986

Expression Profile