RNA id: XM_043249556.1


Basic Information

Item Value
RNA id XM_043249556.1
length 1660
RNA type mRNA
GC content 0.50
exon number 5
gene id LOC122352061
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 23564379 ~ 23649560 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tgtatgtatgtgtgagcGAGCGTCTTTATCATGTCACATCCATGTTGCCTTTTGACGCGTTTCGTCTTGAATCTGCTGGAAAGCAGCTGAGCTTCGTGCACGAATCCGACGCTATACTACCGGCCACAAAGTGCACGGAAGATCTCAGAGGAGCATATCTTCGATTTTGCATGGATTTGTGTTTTGCTCTGCGCTCTTGGCATCACTGCGTAAAAGACTGATCCTATTGccgaggggggaaaaaaggcgCTGGCGCTGCGCCACGATCTGGCAAGTGCGCCTCCCTTCACCGCTGTTTGGCTTATTCATAGTTAGGGGTTTGggtttggctgtttttaaaaaggcaagCACTGCTGTGAAGTTGATCAGTCTGCTCAGAAAACTTCCAGAGGGGAAAGTGTTTTGGAATCGGAAAGTCCAGAATTTCAGTGCGCAACCAATTGCGCACAAACTGGACTATTGGAGAATACCCAAgtgaatcattttacatttttttatatgtatgtatttatataaaaatccaGCGGATTCTTCTTCATCACCTTTTTTTCATCAAagactgtttttattttctcattttttaagACACCCCAACCTGTGCTTTCACTTTGCACGCGGAGTTTTCACTCGAATCTGAGTCAAACGTTCATGCGCTCTCATATCTAGttcttgctctctttttttccccatttaaatCGGACCTCATTCAATTTGAAACGAAGTATGGCTCTTCTTGTGCTGGGTACATTTCTCACGGCGTTGTCCATCAGCGGAGGCTCTTACGTGCCGTGCGAGCCGTGCGATCAGAAGGCGCTCTCCATGTGTCCTCCGGTCCCGGTGGGCTGTCAGCTGGTGAAGGAGCCCGGCTGCGGCTGCTGCTACACTTGCGCTCTGGCGGAGGGGCAGGCGTGCGGGGTGTACACCGGTACATGCACGCACGGACTGCGCTGCCTGCCGCGCAACGGCGAGGAGAAGCCGCTTCACGCCCTGCTGCACGGCAGGGGAGTGTGCACGAACGAGAAGGGATACAAACCACCGCACCCACCCATTGATCGCGAATCAATAGAGCATGATGATACAGTGAAGCCAGACACGACTGAAGACCAGATTCCTAAAATTCCCCTTTACCCCAAACCAGACGTAATCAACAGCAAGAAGCATGCTGCCGTGCGCAAGGACAAGAAGAAACAACAGGAGAAGCATCGGTCACTGGGGTCGATGGACTACTCCCGCCCCATCGACAAACATGAGCCTGAATTTGGTCCCTGCAGAAGGAAGCTGGATGGAATCATTCAAAGTATGAAAGATACCTCCCGCATCATGGCTCTTACCCTCTACCTGCCTAACTGTGACAGGAAGGGTTTCTTCAAGCGCAAACAGTGCAAGCCCTCCCGTGGCCGGAAACGAGGCATCTGCTGGTGCGTGGACAAATACGCGTGGCAGCTGCCCGGCACTGACTACAGCGGCGGTAACATCCAGTGCAAGGATTTGGagaacagcaacaacaacgagTGAGAATCAACCCACCCTGATCACCAGACCTAGGGCCCACCTCCTTGTCCTGTCCCACCAGTCTACCCCGCCAGTCACTTTGAGATTTTGATGCAAAACGACAAAGAAACACAACAGCTATTACAAATACGAACAATCAgactaaaaa

Function

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG:

id description
K23577 IGFBP5; insulin-like growth factor-binding protein 5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU107891 lncRNA downstream 24276 23537504 ~ 23540103 (-) True G72909
TU107866 lncRNA downstream 91651 23472413 ~ 23472728 (-) True G72889
TU107858 lncRNA downstream 129903 23434176 ~ 23434476 (-) True G72881
XR_006251836.1 lncRNA downstream 177302 23380158 ~ 23387077 (-) True LOC122352046
XR_006251833.1 lncRNA downstream 184323 23361012 ~ 23380056 (-) False LOC122352045
TU107908 lncRNA upstream 261893 23911453 ~ 23912036 (-) True G72923
TU107919 lncRNA upstream 262613 23912173 ~ 23913886 (-) True G72927
TU107925 lncRNA upstream 276663 23926223 ~ 23981238 (-) False G72929
TU107928 lncRNA upstream 276663 23926223 ~ 23981238 (-) True G72929
TU108005 lncRNA upstream 603802 24253362 ~ 24285690 (-) True G72980
XM_043249534.1 mRNA downstream 137945 23419262 ~ 23426434 (-) True gjc4b
XM_043249535.1 mRNA downstream 138379 23419262 ~ 23426000 (-) False gjc4b
XM_043249020.1 mRNA downstream 153389 23390692 ~ 23410990 (-) True LOC122351748
XM_043249532.1 mRNA downstream 274240 23281514 ~ 23290139 (-) True LOC122352042
XM_043249636.1 mRNA downstream 320132 23005838 ~ 23244247 (-) True hdac4
XM_043249021.1 mRNA upstream 66549 23716109 ~ 23717055 (-) True LOC122351749
XM_043249022.1 mRNA upstream 265121 23914681 ~ 23918652 (-) True LOC122351750
XM_043248342.1 mRNA upstream 294425 23943985 ~ 23960093 (-) True grb14
XM_043248989.1 mRNA upstream 332410 23981970 ~ 24029114 (-) False cobll1b
XM_043248987.1 mRNA upstream 332411 23981971 ~ 24029114 (-) True cobll1b
TU107329 other downstream 1053072 22459396 ~ 22511307 (-) False LOC122351746
TU107316 other downstream 1257366 22299172 ~ 22307013 (-) False LOC122351746
XR_006251764.1 other downstream 1340712 22171463 ~ 22223667 (-) False cerkl
TU107092 other downstream 1837559 21709288 ~ 21726820 (-) True G72363
TU106615 other downstream 3060489 20489164 ~ 20503890 (-) True G71938
TU107929 other upstream 280647 23930207 ~ 23931329 (-) True G72930
TU107931 other upstream 306659 23956219 ~ 23960325 (-) False grb14
TU108001 other upstream 570962 24220522 ~ 24280708 (-) False G72978
TU108002 other upstream 581675 24231235 ~ 24280708 (-) False G72978
TU108000 other upstream 621895 24271455 ~ 24280708 (-) True G72978

Expression Profile