RNA id: XM_043249564.1


Basic Information

Item Value
RNA id XM_043249564.1
length 3170
RNA type mRNA
GC content 0.48
exon number 18
gene id stk39
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 24425526 ~ 24482087 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

attcatgagctgcTTAATATCCACGCAGCACGTCGTTGCGACACGGGCGCGCGCGCCATGAATATTCACGAGCTCAGCCCTCGCTGTAGTAGGATTCGCGATGTCTCTCTCCGGATGTGTTGATCGCAGGCGGTAGTgatccagcagcagcagcggcggcggcggcggcggaggTGAGCGAGCGAGAGCGACTCTCTCAGCAGCATCATGGCGGAGCAGAGCGACTCCCCGGCGGCCGTCCAAACCCCGCAGCCGGCGCTCACCACCGGCTGGCCCATTGTCAAGGAGGCGTACGAGCTCCAGGAGGTGATCGGTAGCGGAGCCACAGCAGTCGTCCAGGCAGCTCTTTGTAGCCCTCGACAGGAGCGCGTGGCCATCAAGAGAATCAACCTGGAGAAATGCCAGACCAGCATGGACGAGCTGTTGAAAGAGATTCAAGCCATGAGCCAGTGTAACCATCCAAACGTGGTCACCTACTACACCTCATTTGTTGTGAAAGATGAACTTTGGCTGGTCATGAAGCTCTTGAGTGGAGGATCAGTGTTAGACATCATAAAGCACACATTCAACAAAGGGGAGCATAAAAACGGCGTCCTAGATGAATCTACAATAGCAACCATATTGAATGAAGTCCTGGAGGGATTAGATTATCTCCACAAAAATGGACAGATTCAcagGGACGTGAAGGCTGGCAATATTCTACTGGGTGAAGATGGATCGGTGCAGATCGCAGaTTTTGGTGTAAGTGCTTTCCTGGCCACCGGTGGAGACGTCACTAGACACAAAGTGAGGAAAACATTTGTGGGGACCCCGTGCTGGATGGCTCCAGAGGTGATGGAGCAGGTGCGGGGTTACGATTTCAAAGCTGACATTTGGAGTTTCGGGATCACTGCCATTGAACTCGCGACAGGCTCCGCGCCGTATCATCGCTACCCCCCTATGAAGGTTTTAATGCTCACGCTGCAGAACGATCCTCCAACCTTGGAGACTGGGGTCGAAGACAAAGAGATGCTTAAGAAGTATGGGAAGTCTTTTAGAAAACTCATATCCTTGTGCCTTCAGAAGGACCCTGCTAAGAGGCCCACTGCAGCCGagcttttgaaatgtaaatttttcCAAAAGGCTAAGAATCGAGAGTACTTGATTGAAAAGCTGCTTAGTAAAGGACCAAATATAAGCCAAAGAGCCAAAAAGGTCAGAAGGGTCCCGGGGTCGAGTGGTCATCTGCACAAGACCGAGGATGGAGACTGGGAGTGGAGTGACGATGAAATGGACGCGAGAAGTGAAGAAGGGAAGGCTGCTGTCAATCACGGGAGGTCACGCAGGGTCAGAGACGAAAACCAGCATGGTGAAGTGAACGCTAACAGTCTCCCGCTAGAGGACCTGTCCATTCAGCATCCCCAGgttCAACCGTTGGAGAAACCTCCGAGCGCTCAGGGAGCGGTGAACATGGTCCTGAGGTTGAGGAACTCGAGGAAGGAGTTGAATGACATACGGTTTGAATTCACTCCAGGGCAAGACACTGCTGATGGAGTTTCTCAGGAGCTCTTCTCTGCTGGTCTGGTCAACGGTCTCGATGTGGTCGTGGTGGCCGCTAACCTTCAGAAGATTGTAGAAGACCCAATTACCTATAAAGTATTGACCTTTAAGTTGGCGTCCGGTTGTGACAGCACAGAGATCCCAGACGAGGTGAAGCTGATCGGCTTCGCCCAGCTGAGCGTCACCTGAGAGCGTCTCATTAGAGCGGGAGGACGGAGAGAGCCAGCTGCTTCATTCGAGACCTCCCGCCTCCTGCCCCCCGATCAGGTTTTTCCCCCGAATGTTTGCACCTGTTCAATCAAACGCGGCGCTCTTATCCAAACACGCACTCGCCCTCGTTCCCAGACGCTGTATGCCTTTCACCGAAACATTCCAGCAGCCATTTACCCACAATTCAAAGCAGGAGCCCGTCATCTCAGGAGGCAATAGCTAGcgaaaacaaaaaggtttttttgttgttttattaaattgttacgATTTTGTTGGCTCTTACCGTATTGTTATTAccggaaagaaaaaaaaaggcttttatttgACACAAGAGTAGCGCGGATCGTAGACCACAAAGCTGAAGTGGAGACGTCTCCCTCTGAatgtaaaaagcacattttcattctgaatGTTAACGCATTCGAACTGTATTGTACATAGACCTTCTGATGTCTGAAATAAgggaatatttttgttgttttagttcCAGCTCAAAGAGTACGAGAGCAGGGAACCGAACGCTGCCATGTGCAAACGtactgctttctttttttccggGACGGTGTTGATGCTTCGACGCTAGAGgtgccttgttttttttaatccgtGCCTAAGAAACGTAGGTTACAGGCTTGAAGCCGTTCGGCCGATGCTGAGCGGGGAGAACGCCGCTCGACGTCAGACTCGCTCGTAGTATTCTAGTTGGCGTCGAAGTTCACGGCTGATGCACTTTGATTTCCGCGACGCTTATACCCTGACTGTCCACGTTTAACCCGCTGATACGAACAAGGTCATCGCTGCCACAAACACACgccttaaagggatactccaccccaaaattaatatttagttgttaATCGCTGACAAATCCCACGTccttccaaacccgtaaaaagCAACGCTCTTCTTCGAAATACAATTTAAGATCATTTAGGCGAAAAACGAGATTAAAAACCActttcaaggtccagaaaagtatgcaagacattgtcaaaatactccatctgccatcagtggttcaaccgtaacgttatgaagccaaagaaaacaaaaataatgacttaatttaACGATTTCGCCGCAGTAGTGCTACAGTATTCGGCGCTGCAATGATGTTACGCTGCTAAATCGTTGaataaatttaacttaatttttttatgccgTAATTGCTATAATTTACCACCGGCAAAcccatattttttttgcagtgttttgtcGTCTCCTCACAAAATTACGTGAGATATGGAGCGATTATGTAAGCACTTCAACGAGAAAGAtggggaattttttttgttatatcttCCATGATTTTGCTGGAGATATAAAATAAGGCAAACCTGATTTTaatgtagtattttattttattaatctattGGGGCTTACCATGCATTGAAaggaataaatatttgtacttgttttaa

Function

GO: NA

KEGG:

id description
K08835 OXSR1, STK39; serine/threonine-protein kinase OSR1/STK39

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU108005 lncRNA downstream 139836 24253362 ~ 24285690 (-) True G72980
TU108009 lncRNA downstream 141361 24281991 ~ 24284165 (-) True G72984
TU107925 lncRNA downstream 444288 23926223 ~ 23981238 (-) False G72929
TU107928 lncRNA downstream 444288 23926223 ~ 23981238 (-) True G72929
TU107919 lncRNA downstream 511640 23912173 ~ 23913886 (-) True G72927
TU108125 lncRNA upstream 31007 24513094 ~ 24521308 (-) True G73077
TU108133 lncRNA upstream 82794 24564881 ~ 24571112 (-) True G73084
TU108266 lncRNA upstream 257239 24739326 ~ 24745938 (-) True G73160
TU108285 lncRNA upstream 294073 24776160 ~ 24778655 (-) True G73175
TU108295 lncRNA upstream 318951 24801038 ~ 24801377 (-) True G73179
XM_043249607.1 mRNA downstream 231724 24142666 ~ 24193802 (-) True csrnp3
XM_043248992.1 mRNA downstream 387396 24029509 ~ 24038130 (-) True slc38a11
XM_043248987.1 mRNA downstream 396412 23981971 ~ 24029114 (-) True cobll1b
XM_043248138.1 mRNA upstream 47585 24529672 ~ 24533048 (-) True spc25
XM_043248139.1 mRNA upstream 47585 24529672 ~ 24532778 (-) False spc25
XM_043249351.1 mRNA upstream 51790 24533877 ~ 24558743 (-) False abcb11a
XM_043249350.1 mRNA upstream 51790 24533877 ~ 24558743 (-) True abcb11a
XM_043249352.1 mRNA upstream 51790 24533877 ~ 24558741 (-) False abcb11a
TU108001 other downstream 144818 24220522 ~ 24280708 (-) False G72978
TU108002 other downstream 144818 24231235 ~ 24280708 (-) False G72978
TU108000 other downstream 144818 24271455 ~ 24280708 (-) True G72978
TU107931 other downstream 465201 23956219 ~ 23960325 (-) False grb14
TU107929 other downstream 494197 23930207 ~ 23931329 (-) True G72930
TU108324 other upstream 545498 25027585 ~ 25030965 (-) True G73201
TU108463 other upstream 866691 25348778 ~ 25349640 (-) True G73301
TU108462 other upstream 974327 25456414 ~ 25458742 (-) True G73300
TU108524 other upstream 1308430 25790517 ~ 25793056 (-) True G73347
TU108525 other upstream 1311996 25794083 ~ 25832356 (-) False LOC122351758

Expression Profile