RNA id: XM_043249581.1


Basic Information

Item Value
RNA id XM_043249581.1
length 3403
RNA type mRNA
GC content 0.45
exon number 22
gene id armc8
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 11193693 ~ 11204968 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tggaaaGTGCCGCTCTGAATGTTCCGCTGAGTGAATGATGGCGTGCCTGCTGGAGGCCCCTTTACGCATCAGCGTGTTATCTGAAGTCACAGCCACGAGTCGCCACTATGTTGACCGGCTTTTTGACCCCGACCCACAGAACGTGCTGCAGGGAGTCATTGACATGAAGAATGCTGTCATCGGAAACAACAAACAGAAGGCCAACCTGATTGTGCTCGGAGCCGTGCCAAGactccTGTATCTTCTCCAGCAGAGCTCCTCTAGCCTGGAGCTCAGGACTGAATGTGCGGTCGTGTTGGGCAGCCTGGCAATGGGCACAGAGAACAACATCAAGTCCCTGGTGGACTGTCACATCATCCCAGCCCTGCTGCAAGGTCTATTGTGTTCTGATCTGATCTTCATTGAGGCATGTCTGCGTTGTTTGAGAACCATCTTCATCAGTCCAGTCACACCAGTGCAGCTGCTCTACACTGACCCGACTGTGATCCCCCATCTCATGTCCCTACTGAGTCGGTCACAGCACACACAGGAATACATCACGCAAATCTTCGCTCACTGCTGCAAGactCCAGAACATCAGACGGTGTTGTTCAACCACGGTGCCATCCAGAACATCGCTCCTTTGCTCATCTCTCCCTCCTATAAGGTACGAATGCAGGCGTTAAAGTGTTTCTCAGTTTTGGCCTATGAGAACGCTCAGGTCTCCATGACACTGGTGAATGTGCTTGTTGATGGTGAGCAGCTCTCTCAGGTTTTTGTTAGAATGATGCAAAGGGACAAACCCATTGAAATGCAGCTTACAGCCGCCAAATGCTTAACATACATGTGTCGAGCAGGAGCCATCAGGACAGACGACAACTGTATTGTACTAAAGaCTTTGCCGTGCCTGGTACGGATGTGCAGTAAAGAGCGGTTACTCGAGGAGAGGGTGGAGGGGGCAGAGACGCTAGCCTACCTGATGGAGCCGGACATAGAGCTGCAGCGGATCGCAAGCGTCACTGACCACCTCGTGTCCATGCTGGCTGACTACTTTAAATATCCAAGCTCTGTCAGTGCCATCACTGATATTAAGAGGTTGGATCATGACTTGAAACATGCACATGAGCTGCGGCAGGCAGCCTTTAAACTCTATGCCTCTCTGGGCTCCAATGATGAAGATATCAGGAAAAagATTACAGAGACGGAAAATATGATGGACAGGATTGTTAGTGGCCTATCAGAATCTAGTATCAAAGTGCGGTTAGCAGCAGTCAGATGTCTTCACAGTTTATCACGGTCTGTACAACAGTTAAGGACAAGTTTCCATGATCATGCAGTATGGAAGCCACTAATGAAGTTATTACAGAACGCACCAGATGAGGTCCTGGTCATGGCCTCTTCAACACTATGCAACCTACTTCTGGAGTTTTCACCCAGCAAAGAACCTATCTTAGAGTCTGGGGTCATCGAGTTACTATGCAGCCTCACACAAAGTGACAGTCCAGCTCTAAGAGTCAATGGCATCTGGGCTCTTATGAACATGGCCTTCCAGGCAGATCAGAAGGTGAAGGTGGAGATAGTTCGAGCTCTGGGTACAGAACAGCTCTTTAGACTTCTGTCTGATCCTGATACTAATGTGCTCATGAAAACACTGGGACTGCTTCGAAACCTGCTCTCCACACGGCCgCATATAGACCAGATCATGAGCTCACATGGGAAGCAGATAATGCAAGCCGTCACGCTTATCCTGGAGGGAGAACACAGCATAGAGGTCAAAGAGCAGACATTGTGCATATTGGCCAATATTGCTGACGGAAATACTGCCAAGGAACTCATTATGACCAATGACGACATGctccaaaaaattaaatattacatgGGTCACTCCAATGTGAAGCTGCAGCTGGCTGCCACTTTCTGCATCTCTAACCTCATCTGGAATGAGGAGGACGGCTCACAAGAAAGACAAGACAAGCTAAGGGAGATGGGCTTTGTTGATATTTTACACAAACTCACCCAGGCATCAGATCCCAACCTCTGTGACAGgGCAAAAACGGCAATGCAGCAGTATTTGGCATGACCTCGAAGGAAGGCAGGATACGGCCTCACTAACAATCTCTAGGAGGATCGCATCTCCCgagtttttgttttagattcGAGTTTCGTTTTGctcttcctttttgttttgttgcacaAGACACCTTTTGTTGTGGAGACCCTGAACAGCTTCGTAAATCAAGAGACACGGTTTCCAGGGGGCCACAACACCTTTTGGGCTTTCAGCTACGTTTGCTTAATACGTTTTCTGCTGAACTCTTGgaactattatatttttgtttgtttgttttttggacttaatgtgaaggaaaaaaaagctccTCAAAGTGTGTTGCAGCGCCACCTGGTGGATTGAGGCTTTGACGCTTTGGACTCCCTTTGGAGAAAGCTGAACGACCTCTCAGTGCTACGCTTCTAGGAGCTTAGTCTCCTTATTTTGgtttgctgatttattattgatattattatgataacaattattattattttaattgggACTTTGACTCAAGGTTAGAAAAAGActgcttgtttttgttctttttttgtggaTACAtacctaaataaatatatataaatataaatatataaatatattttttggatttttaatttCCCTTGCAGGTTGTTTTTCCCCTTTGTATTTTCCTCTCTGTAATATAGGCTGATGTGGGTTCATCTGGAGAGGCAGCATGTTGGGTCATTTACAAAGACATTTCGTAGAAACCATCCAACCCCAAATAGAAGGTGAACGTTTGTTTGCTCTTTACACAGGTTCcttgttttctcattttcactACCTTTACCTTTACACAAATCAGTGTCCTCATAACTCCCTCTTTTCGAAGCTCTATAGTGAATGTTTCCACTCAAATATATGCAGGCCTCTGCCACGGTGCAGCCCACTGCTTTGTGTCTTTTATTCTGGGTTGGGAAGGGCATTTTAGCACAGAAGAGCTTGGAGATGAGGCACGTGCTTTAGAAATGCTGCACATGTAGGAAAAACCGGTTTGAATCCTGTCTGTGACCCTTTTCTTCCTTTAAATGATATAGTATATTTTCCTAcctaaaaaaagttacagaaaaATCAAATCAGCTTACGGAAGATGAACTCTGACAGTTATCACTTGCTTCAGACATGTTGGACCTTGGTGCTCTGCTTATATGGGAATAACTAGTTTGAATCAAGTGTGCCACACGCATCCTAAAAAGTCAAagccaaaaacattttgattggcATCTGGTGGCTGACTGTAGTACAGGTCATGTACCTGCCCTCTCGGAGTAAACAAATAAGTCGAACTAAAAATCTAATTacacttcaaataaatgtttctcaaagATGGTTTCCAtctttttaatgcttaaa

Function

GO: NA

KEGG:

id description
K23336 ARMC8; armadillo repeat-containing protein 8

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU102615 lncRNA downstream 163200 11029377 ~ 11030493 (-) True G69396
TU102576 lncRNA downstream 239708 10947044 ~ 10953985 (-) True G69362
XR_006251756.1 lncRNA downstream 246949 10930480 ~ 10946744 (-) False LOC122351427
TU102742 lncRNA upstream 153982 11358950 ~ 11365819 (-) True G69467
TU102798 lncRNA upstream 191708 11396676 ~ 11493120 (-) False LOC122351858
XR_006251827.1 lncRNA upstream 585813 11790781 ~ 11954234 (-) True LOC122351998
TU102924 lncRNA upstream 880746 12085714 ~ 12156439 (-) False G69596
TU102926 lncRNA upstream 880746 12085714 ~ 12156439 (-) True G69596
XM_043249406.1 mRNA downstream 97012 11089670 ~ 11096681 (-) True idh1
XM_043249268.1 mRNA downstream 107783 11051094 ~ 11085910 (-) True plekhm3
XM_043249269.1 mRNA downstream 107783 11059233 ~ 11085910 (-) False plekhm3
XM_043249270.1 mRNA downstream 107783 11059235 ~ 11085910 (-) False plekhm3
XM_043248824.1 mRNA downstream 148231 11041292 ~ 11045462 (-) False fzd5
XM_043248821.1 mRNA upstream 5232 11210200 ~ 11216654 (-) True rab5b
XM_043249309.1 mRNA upstream 20988 11225956 ~ 11231688 (-) True lcmt2
XM_043249223.1 mRNA upstream 181409 11386377 ~ 11389378 (-) True tlr20.4
XM_043249222.1 mRNA upstream 187272 11392240 ~ 11396663 (-) True LOC122351856
XM_043249224.1 mRNA upstream 191698 11396666 ~ 11399215 (-) True LOC122351858
XR_006251823.1 other downstream 507066 10680158 ~ 10686627 (-) False mrasa
XR_006251803.1 other downstream 674236 10515272 ~ 10519457 (-) False fdx1
XR_006251819.1 other downstream 751821 10433507 ~ 10441872 (-) False trim13
TU102802 other upstream 292042 11497010 ~ 11499372 (-) False LOC122351308
XR_006251743.1 other upstream 962023 12166991 ~ 12189656 (-) True gtdc1
TU102995 other upstream 1217461 12422429 ~ 12423446 (-) True G69650
TU103144 other upstream 1503663 12708631 ~ 12711824 (-) False LOC122351186
XR_006251867.1 other upstream 1533076 12738044 ~ 12738171 (-) True LOC122352189

Expression Profile