RNA id: XM_043249729.1


Basic Information

Item Value
RNA id XM_043249729.1
length 978
RNA type mRNA
GC content 0.43
exon number 7
gene id mettl5
representative True

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 24754888 ~ 24758657 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCGCTAGATCAGCCAGCAGAGGTAGAAGAAGAGCAAAACACACGCAAGTGCACTATATGTTGTCATATTTAATCCAGTGTACATTTTCCACTTGAGGAAAGTCGTTATATCACTAGAAGGCTCAAGTTCGGACTCCATGATCGTTCGGCGCTTCAGTTAAGAGAGAACCAGTCGACGTTTCTCGTCTATCATCATTAGCATGACCTCTAGAAACACATATGACTGATATGAGCAGAATTAATGTAGATTAGTGTAGATATGAAGCTCAAAGAGCTAGAAAGCTGCCTTCAACAGGTGGATGGATTTGAGGAGCCCAAAATACTCCTGGAGCAGTACCCCACCAGTCCGCATATAGCGGGCTGTATGCTGTACACCATCCACAACACATTTGATGACATACAGAATAAACTGGTAGCAGACTTGGGCTGTGGATGCGGGGTGCTATCGATAGGAGCCTCGGTGCTCGATGCTGGGCTGTGTGTCGGATTTGACATCGACGAAGACGCCTTGGACGTATTCAAAGGAAACGTCGAGGATTTTGAGCTGTCAAACGTTGATATGGTCCAGTGTGATGTTTGCTCTATTGGATCCTCTTACGCCAAGAAGTTTGACACGGTCATCATGAACCCGCCGTTTGGCACGAAGCACAACCAAGGGATTGACATGCAGTTCCTCCGAACGGCCATTTCCATGGCAAGTACAGCTGTGTATTCCCTTCACAAGACCTCAACGCGGGATCACATTCAGAAGAAAGCAAATGACTGGAAGGTGAAAATGGAAGTCATTGCAGAGCTCAGATATGACCTGCCAGCGTCTTATAAATTCCATAAAAAGAAGTCGGTTGATATTCAAGTGGACTTCATAAGATTTACTCCGACATGAACGTCAAAAAGGAATTTGTGATTACAAATGTGgttgcagtttttttatatatgtatatgtaaaaatacaatgttcaaaataaattttataaatgac

Function

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU108266 lncRNA downstream 8950 24739326 ~ 24745938 (-) True G73160
TU108133 lncRNA downstream 183776 24564881 ~ 24571112 (-) True G73084
TU108125 lncRNA downstream 233580 24513094 ~ 24521308 (-) True G73077
TU108005 lncRNA downstream 469198 24253362 ~ 24285690 (-) True G72980
TU108009 lncRNA downstream 470723 24281991 ~ 24284165 (-) True G72984
TU108285 lncRNA upstream 17503 24776160 ~ 24778655 (-) True G73175
TU108295 lncRNA upstream 42381 24801038 ~ 24801377 (-) True G73179
XR_006251791.1 lncRNA upstream 53659 24812316 ~ 24820878 (-) True LOC122351686
TU108298 lncRNA upstream 53659 24812316 ~ 24821062 (-) False LOC122351686
TU108303 lncRNA upstream 80949 24839606 ~ 24839961 (-) True G73186
XM_043248298.1 mRNA downstream 21106 24728368 ~ 24733782 (-) True ccdc173
XM_043249293.1 mRNA downstream 27158 24717610 ~ 24727730 (-) True fastkd1
XM_043248836.1 mRNA downstream 87721 24571862 ~ 24667167 (-) True lrp2a
XM_043249351.1 mRNA downstream 196145 24533877 ~ 24558743 (-) False abcb11a
XM_043248413.1 mRNA upstream 2884 24761541 ~ 24764855 (-) True cxcr2
XM_043248760.1 mRNA upstream 9628 24768285 ~ 24772259 (-) True LOC122351585
XM_043248763.1 mRNA upstream 26246 24784903 ~ 24786237 (-) True LOC122351587
XM_043249720.1 mRNA upstream 30849 24789506 ~ 24797054 (-) True zgc:92380
XM_043248249.1 mRNA upstream 44966 24803623 ~ 24807781 (-) True gpbar1
TU108001 other downstream 474180 24220522 ~ 24280708 (-) False G72978
TU108002 other downstream 474180 24231235 ~ 24280708 (-) False G72978
TU108000 other downstream 474180 24271455 ~ 24280708 (-) True G72978
TU107931 other downstream 794563 23956219 ~ 23960325 (-) False grb14
TU107929 other downstream 823559 23930207 ~ 23931329 (-) True G72930
TU108324 other upstream 268928 25027585 ~ 25030965 (-) True G73201
TU108463 other upstream 590121 25348778 ~ 25349640 (-) True G73301
TU108462 other upstream 697757 25456414 ~ 25458742 (-) True G73300
TU108524 other upstream 1031860 25790517 ~ 25793056 (-) True G73347
TU108525 other upstream 1035426 25794083 ~ 25832356 (-) False LOC122351758

Expression Profile