Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006251711.1 |
| length | 888 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 3 |
| gene id | LOC122351189 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056707.1 |
| NCBI id | CM032076.1 |
| chromosome length | 26426558 |
| location | 16586641 ~ 16599872 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0051156 | glucose 6-phosphate metabolic process | biological_process |
| GO:0006098 | pentose-phosphate shunt | biological_process |
| GO:0006739 | NADP metabolic process | biological_process |
| GO:0019682 | glyceraldehyde-3-phosphate metabolic process | biological_process |
| id | description |
|---|---|
| ko00480 | Glutathione metabolism |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU104718 | lncRNA | upstream | 2546 | 16583765 ~ 16584095 (+) | True | G70793 |
| TU104717 | lncRNA | upstream | 3291 | 16581928 ~ 16583350 (+) | True | G70792 |
| TU104715 | lncRNA | upstream | 5179 | 16581192 ~ 16581462 (+) | True | G70791 |
| XR_006251703.1 | lncRNA | upstream | 67291 | 16506720 ~ 16519350 (+) | True | LOC122351146 |
| TU104726 | lncRNA | downstream | 5524 | 16605396 ~ 16606343 (+) | True | G70800 |
| TU104728 | lncRNA | downstream | 9996 | 16609868 ~ 16610120 (+) | True | G70802 |
| TU104729 | lncRNA | downstream | 14813 | 16614685 ~ 16614917 (+) | True | G70803 |
| TU104730 | lncRNA | downstream | 15666 | 16615538 ~ 16616064 (+) | True | G70804 |
| TU104742 | lncRNA | downstream | 129783 | 16729655 ~ 16731361 (+) | False | G70814 |
| XM_043248773.1 | mRNA | upstream | 6328 | 16541234 ~ 16580313 (+) | False | kdm6a |
| XM_043249529.1 | mRNA | downstream | 84874 | 16684746 ~ 16694462 (+) | True | ccdc80 |
| XM_043249530.1 | mRNA | downstream | 84874 | 16684746 ~ 16694462 (+) | False | ccdc80 |
| XM_043249381.1 | mRNA | downstream | 99893 | 16699765 ~ 16713826 (+) | True | f5 |
| XM_043249389.1 | mRNA | downstream | 114102 | 16713974 ~ 16720587 (+) | True | gpr161a |
| XM_043249499.1 | mRNA | downstream | 146021 | 16745893 ~ 16749701 (+) | True | mpc2b |
| TU104501 | other | upstream | 840535 | 15734592 ~ 15746106 (+) | False | plcl1 |
| TU104429 | other | upstream | 875464 | 15708236 ~ 15711177 (+) | False | LOC122351678 |
| XR_006251807.1 | other | upstream | 1161602 | 15401128 ~ 15425039 (+) | False | si:ch211-168k14.2 |
| XR_006251758.1 | other | upstream | 2904650 | 13676163 ~ 13681991 (+) | False | ccnt2a |
| unassigned_transcript_1467 | other | upstream | 3162815 | 13423714 ~ 13423826 (+) | True | trnal-caa |
| TU104743 | other | downstream | 128635 | 16728507 ~ 16731361 (+) | True | G70814 |
| TU104753 | other | downstream | 146027 | 16745899 ~ 16749695 (+) | False | mpc2b |
| TU105078 | other | downstream | 316889 | 16916761 ~ 16919290 (+) | True | si:ch211-218d20.15 |
| TU105185 | other | downstream | 603925 | 17203797 ~ 17206505 (+) | False | jam2b |
| TU105274 | other | downstream | 739255 | 17339127 ~ 17339622 (+) | True | G71130 |
