RNA id: TU10045


Basic Information

Item Value
RNA id TU10045
length 796
RNA type TUCP
GC content 0.50
exon number 3
gene id c1h19orf53
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 26801910 ~ 26802954 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGTCTCTCTGTTTCCGGTTGCGTTCAAGCGATAGAAAATGGCTCAAGGCAAACAGAAATTTAAAGCGCAACGACCCGGAGGAGCTAAAAAGCAACAACAGAAGCCGAAAGGACCGAAGAAAGGAGGAAGGATCATCGCTCCCAAAAAAGCTCAGGTGGTCCAGCAGCAGAAGCTGAAGAAGGGTTTGGAGGTGGCCATCAGGAACAGGATTGAGCACGAAGTCACGCAGAAGGCCAGCACGTCCCTTCACAAGAAACTGAGCGTGCTGAAGACTCCCGCGGGGAAGAGCGGCGGCGCTGGACCTCCAAAACCCGGACCATCCAAGTCCACCTGACACCAGAACACTGCGGGGCCATGGACCGCCGCTAGAGGGCGCCACCGcgctataaatataaatacgtTCACTACTTTCTGTGATAGgtttatttttagaaacagCAAAATATGGTGTGGAATATGACGTATGTGATCTTTTAGACTGTGCttatatttatgcaataaaaCGAGAGAGCATCGTTAGCTTTCATGATGCctaaattgtaactttttttttggtcgtGGGAAAGCAAAGcggttaatatatttataattatacgCGACTCTGGACCGCAAAAGGAGGGATGTGTTTTCAAACATCGATGTGTGGTCTGTTAGGATGCCGGAGATGCAAAAATCTggatggtgcaaaaaaaaaaaaaaaaaaaaaatctatatattgagaaaatcacatttaaaattgtccaaatgaattcttagcaatgcacgttaatcaaaaataaagtagcAAATTTTCAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU10053 lncRNA downstream 37430 26760004 ~ 26764480 (-) True G6870
TU10058 lncRNA downstream 43618 26754732 ~ 26758292 (-) True G6874
TU10059 lncRNA downstream 43618 26757198 ~ 26758292 (-) False G6874
TU10056 lncRNA downstream 52954 26748723 ~ 26748956 (-) True G6873
TU9973 lncRNA downstream 95082 26653242 ~ 26706828 (-) True G6827
TU10026 lncRNA upstream 7023 26809948 ~ 26865737 (-) False G6856
TU10030 lncRNA upstream 60178 26863103 ~ 26865737 (-) True G6856
TU10071 lncRNA upstream 114754 26917679 ~ 26919998 (-) False si:ch211-286b5.5
TU10072 lncRNA upstream 114754 26917679 ~ 26920034 (-) False si:ch211-286b5.5
TU10082 lncRNA upstream 130207 26933132 ~ 26942207 (-) True G6887
XM_043246825.1 mRNA downstream 3896 26787308 ~ 26798014 (-) False slc25a23a
XM_043246834.1 mRNA downstream 3897 26787308 ~ 26798013 (-) False slc25a23a
XM_043246843.1 mRNA downstream 3897 26787308 ~ 26798013 (-) False slc25a23a
XM_043246851.1 mRNA downstream 3897 26787308 ~ 26798013 (-) True slc25a23a
XM_043246860.1 mRNA downstream 3898 26787308 ~ 26798012 (-) False slc25a23a
XM_043246354.1 mRNA upstream 483 26803408 ~ 26819171 (-) False vps54
XM_043246334.1 mRNA upstream 483 26803408 ~ 26819171 (-) False vps54
XM_043246325.1 mRNA upstream 483 26803408 ~ 26819171 (-) False vps54
XM_043246318.1 mRNA upstream 483 26803408 ~ 26819171 (-) False vps54
XM_043246309.1 mRNA upstream 483 26803408 ~ 26819171 (-) False vps54
TU9833 other downstream 384031 26416859 ~ 26417879 (-) False smdt1b
TU9834 other downstream 384031 26416883 ~ 26417879 (-) False smdt1b
TU9622 other downstream 666424 26130788 ~ 26135486 (-) False G6592
TU9696 other downstream 941502 25859873 ~ 25860408 (-) False patl1
TU9035 other downstream 1086232 25714102 ~ 25715678 (-) True LOC122353196
TU10183 other upstream 394980 27197905 ~ 27202567 (-) False LOC122344379
XR_006250838.1 other upstream 438299 27241224 ~ 27255067 (-) False LOC122343833
TU10417 other upstream 951857 27754782 ~ 27939452 (-) False G7105
TU10420 other upstream 951857 27754782 ~ 27939452 (-) False G7105
TU10496 other upstream 1271723 28074648 ~ 28076444 (-) False LOC122349330

Expression Profile