RNA id: TU10056



Basic Information


Item Value
RNA id TU10056
length 234
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G6873
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 26748723 ~ 26748956 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CACAATTTGAGCAGGATATCACATTCAGAaactcagatttacattttcatgttgaGATAAATGTGTGATCTTACGTCAGTTTCTCAAGTTTACAGTGAGGAtccttcagtccttcagagagcagcttcacacCTGTATCTCTTAGTTTATTCTCAGTCAGATCCAGTTCTCTCAGATGTGAGgagtttgatctcagagctgaactcagagcagaacaaccttcatctgtgatGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU9973 lncRNA downstream 41895 26653242 ~ 26706828 (-) True G6827
TU9983 lncRNA downstream 58233 26689354 ~ 26690490 (-) True G6834
TU9899 lncRNA downstream 225321 26457806 ~ 26523402 (-) False LOC122353745
TU9936 lncRNA downstream 234803 26513569 ~ 26513920 (-) True G6801
TU9934 lncRNA downstream 235765 26512392 ~ 26512958 (-) True G6799
TU10058 lncRNA upstream 5776 26754732 ~ 26758292 (-) True G6874
TU10059 lncRNA upstream 8242 26757198 ~ 26758292 (-) False G6874
TU10053 lncRNA upstream 11048 26760004 ~ 26764480 (-) True G6870
TU10026 lncRNA upstream 60992 26809948 ~ 26865737 (-) False G6856
TU10030 lncRNA upstream 114147 26863103 ~ 26865737 (-) True G6856
XM_043237802.1 mRNA downstream 9683 26734472 ~ 26739040 (-) True avpi1
XM_043237794.1 mRNA downstream 9686 26734472 ~ 26739037 (-) False avpi1
XM_043237777.1 mRNA downstream 21291 26722519 ~ 26727432 (-) True cdc25d
XM_043237783.1 mRNA downstream 21296 26722519 ~ 26727427 (-) False cdc25d
XM_043247910.1 mRNA downstream 26894 26718192 ~ 26721829 (-) True pgam1b
XM_043246905.1 mRNA upstream 18330 26767286 ~ 26773820 (-) True crtac1a
XM_043246813.1 mRNA upstream 29511 26778467 ~ 26786900 (-) False LOC122350383
XM_043246804.1 mRNA upstream 29511 26778467 ~ 26786900 (-) True LOC122350383
XM_043246825.1 mRNA upstream 38352 26787308 ~ 26798014 (-) False slc25a23a
XM_043246834.1 mRNA upstream 38352 26787308 ~ 26798013 (-) False slc25a23a
TU9833 other downstream 330844 26416859 ~ 26417879 (-) False smdt1b
TU9834 other downstream 330844 26416883 ~ 26417879 (-) False smdt1b
TU9622 other downstream 613237 26130788 ~ 26135486 (-) False G6592
TU9696 other downstream 888315 25859873 ~ 25860408 (-) False patl1
TU9033 other downstream 1033045 25714668 ~ 25715678 (-) False LOC122353196
TU10045 other upstream 52954 26801910 ~ 26802925 (-) True c1h19orf53
TU10046 other upstream 53214 26802170 ~ 26802925 (-) False c1h19orf53
TU10183 other upstream 448949 27197905 ~ 27202567 (-) False LOC122344379
XR_006250838.1 other upstream 492268 27241224 ~ 27255067 (-) False LOC122343833
TU10417 other upstream 1005826 27754782 ~ 27939452 (-) False G7105

Expression Profile