RNA id: TU10127



Basic Information


Item Value
RNA id TU10127
length 274
lncRNA type sense_over
GC content 0.34
exon number 4
gene id LOC122349164
representative False

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 26984544 ~ 26992582 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ACGTCACACTCTCTCCCACAGCGACAGTTTATATGCTATTTGTTATCGGAGGTCTGCTCATAGCAGCGATCATATTGGGAATTGGATTGTTTGCTGTTTATCAACATaggaaaaaatctaaaacatcaGCAGACATCACACTGCCTAACGACAGCAATGCTGAACAGGACAGCCGTGTATATGAGAATTTTGATCAGAAAGAAAGTATCAACGCTACGACCAGACGAGAGCAAAAATGTTCGGTCTACAGTAACATTCCCTCTGCAGAACAGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU10082 lncRNA downstream 42337 26933132 ~ 26942207 (-) True G6887
TU10072 lncRNA downstream 64510 26917679 ~ 26920034 (-) False si:ch211-286b5.5
TU10071 lncRNA downstream 64546 26917679 ~ 26919998 (-) False si:ch211-286b5.5
TU10026 lncRNA downstream 118807 26809948 ~ 26865737 (-) False G6856
TU10030 lncRNA downstream 118807 26863103 ~ 26865737 (-) True G6856
TU10130 lncRNA upstream 8778 26994438 ~ 26994699 (-) True G6923
TU10133 lncRNA upstream 20987 27006647 ~ 27007143 (-) True G6926
TU10134 lncRNA upstream 21843 27007503 ~ 27007987 (-) True G6927
TU10136 lncRNA upstream 23496 27009156 ~ 27009552 (-) True G6929
TU10140 lncRNA upstream 26463 27012123 ~ 27012371 (-) True G6933
XM_043245477.1 mRNA downstream 957 26980305 ~ 26983587 (-) True LOC122349409
XM_043224501.1 mRNA downstream 64515 26917669 ~ 26920029 (-) True si:ch211-286b5.5
XM_043223173.1 mRNA downstream 66929 26912603 ~ 26917615 (-) True si:ch211-286b5.4
XM_043223267.1 mRNA downstream 66931 26912603 ~ 26917613 (-) False si:ch211-286b5.4
XM_043223346.1 mRNA downstream 66932 26912603 ~ 26917612 (-) False si:ch211-286b5.4
XM_043238097.1 mRNA upstream 28817 27014477 ~ 27024300 (-) True LOC122344082
XM_043238115.1 mRNA upstream 66067 27051727 ~ 27054595 (-) True dnajb1b
XM_043238130.1 mRNA upstream 80498 27066158 ~ 27067828 (-) True ndufb7
XM_043238100.1 mRNA upstream 83014 27068674 ~ 27076809 (-) True zgc:136908
XM_043238104.1 mRNA upstream 92839 27078499 ~ 27085950 (-) True samd1b
TU10045 other downstream 181619 26801910 ~ 26802925 (-) True c1h19orf53
TU10046 other downstream 181619 26802170 ~ 26802925 (-) False c1h19orf53
TU9833 other downstream 566665 26416859 ~ 26417879 (-) False smdt1b
TU9834 other downstream 566665 26416883 ~ 26417879 (-) False smdt1b
TU9622 other downstream 849058 26130788 ~ 26135486 (-) False G6592
TU10183 other upstream 212245 27197905 ~ 27202567 (-) False LOC122344379
XR_006250838.1 other upstream 255564 27241224 ~ 27255067 (-) False LOC122343833
TU10417 other upstream 769122 27754782 ~ 27939452 (-) False G7105
TU10420 other upstream 769122 27754782 ~ 27939452 (-) False G7105
TU10496 other upstream 1088988 28074648 ~ 28076444 (-) False LOC122349330

Expression Profile