RNA id: TU10183



Basic Information


Item Value
RNA id TU10183
length 735
RNA type TUCP
GC content 0.43
exon number 4
gene id LOC122344379
representative False

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 27196238 ~ 27202628 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGAAGACGTACTATAAGACACAGCAAACAATGGATATAGAggatatttatcaaaatgttgATCGCAGAAATATTAAGAACTCAACTGGACACCAAACTCAGAGTCACGAccaggatgaaagaaaagatctAAAACacaGAGGAAGTAGATGTTTGGTGTTGATCACAGCGAGTCTCGGGATCATTTGTGTTCTTCTGCTGGTCTTCATCATTCTGCTGAACATCTCCATCACAGCAGAGAGAGACCTGATAAAGAGTTACAAGAACACGGCTGAAGAGCTCAATCAAACCATCAACGTCTTACAGGACAATAACACTGAACTAATGACTGAAAAACACCAGCTGCAGGACAACTTCAGCTCTTTGAGTCAGAAGAAACTGGAGCAGGAGACCAGAGTCAAAGATCTCACTGCTGAGAAAAAACAGTTACAGGGAAGTCTTGACTCTTTGAGTCAGAAGAAGCAGGAGTTAGAAAGTAAAGTCAGGTCTCTGAGTGATGAACTAAACATGGACGCTTCTAAACGAGtttgttttttcatgccCAATGAGGAGAAGAGCTGGTCTGAGAGCAGACAGTACTGCAGGGATCGTGGAGCTGATCTGGTCATCATCAACACTGAAGAGAAGCAGAGATTCATATCTTCATTCATCAAGGAGAGAGTGTGGATCGGTTTGTCTGACACAGAGCAGGAAGGCAACATGAAATGGGTGGATAATACAGCAATGAAGCAAGGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU10158 lncRNA downstream 106476 27064144 ~ 27091429 (-) False G6949
TU10157 lncRNA downstream 132575 27064144 ~ 27065330 (-) True G6949
TU10140 lncRNA downstream 185534 27012123 ~ 27012371 (-) True G6933
TU10136 lncRNA downstream 188353 27009156 ~ 27009552 (-) True G6929
TU10134 lncRNA downstream 189918 27007503 ~ 27007987 (-) True G6927
TU10213 lncRNA upstream 94608 27297175 ~ 27297611 (-) True G6981
TU10173 lncRNA upstream 96859 27299426 ~ 27321856 (-) True G6957
TU10214 lncRNA upstream 99239 27301806 ~ 27302275 (-) True G6982
TU10215 lncRNA upstream 100533 27303100 ~ 27305172 (-) False G6983
TU10217 lncRNA upstream 100533 27303100 ~ 27305694 (-) True G6983
XM_043238125.1 mRNA downstream 1844 27194089 ~ 27196061 (-) True LOC122344463
XM_043238127.1 mRNA downstream 10176 27186219 ~ 27187729 (-) True LOC122344496
XM_043238124.1 mRNA downstream 12003 27180727 ~ 27185902 (-) True LOC122344447
XM_043238132.1 mRNA downstream 41656 27152145 ~ 27156249 (-) True LOC122344560
XM_043238131.1 mRNA downstream 73183 27123332 ~ 27124722 (-) True LOC122344544
XM_043238079.1 mRNA upstream 5992 27208559 ~ 27223761 (-) False c3a.4
XM_043238078.1 mRNA upstream 5992 27208559 ~ 27223761 (-) True c3a.4
XM_043238076.1 mRNA upstream 21338 27223905 ~ 27238733 (-) True c3a.6
XM_043238077.1 mRNA upstream 37757 27240324 ~ 27255066 (-) True LOC122343833
XM_043238095.1 mRNA upstream 77734 27280301 ~ 27289321 (-) True dennd1c
TU10045 other downstream 394980 26801910 ~ 26802925 (-) True c1h19orf53
TU10046 other downstream 394980 26802170 ~ 26802925 (-) False c1h19orf53
TU9833 other downstream 780026 26416859 ~ 26417879 (-) False smdt1b
TU9834 other downstream 780026 26416883 ~ 26417879 (-) False smdt1b
TU9622 other downstream 1062419 26130788 ~ 26135486 (-) False G6592
XR_006250838.1 other upstream 38657 27241224 ~ 27255067 (-) False LOC122343833
TU10417 other upstream 552215 27754782 ~ 27939452 (-) False G7105
TU10420 other upstream 552215 27754782 ~ 27939452 (-) False G7105
TU10496 other upstream 872081 28074648 ~ 28076444 (-) False LOC122349330
TU11020 other upstream 1041561 28244128 ~ 28248523 (-) True G7475

Expression Profile