RNA id: TU10490



Basic Information


Item Value
RNA id TU10490
length 370
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G7139
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 27847715 ~ 27848178 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CAGAAACTCACAGCCATTAActgagagaagagacagaaacaatataCTCCTGCTGCAGTCAGTCAGAAGAGAGGATGCAGGCAGATATAGCTGTGATGTACAAGAACACAATCACTATCTCAGATCACCTGATCTTCAGCTCACTGTCATGTaCCCACCCAGGAACGTCTCAGTGTTCATGAATGGATCTGGTGAAATagtggagggagattcagtgactctgatctgcagcagtgattcaaacccacctgcTCTGAACTTCTTCTGGTTTAAGGAGAATCAAAGCTCATCTGTTGGATCTGGACAGAGTTTCAGTGCACTACAGAGTGGACGCTTCTACTGTGAGGCTCACAATCAACACGGATCTCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU10424 lncRNA downstream 102420 27736578 ~ 27745295 (-) True G7106
TU10425 lncRNA downstream 103758 27736991 ~ 27743957 (-) False G7106
TU10265 lncRNA downstream 199429 27647927 ~ 27648286 (-) True G7014
TU10263 lncRNA downstream 200990 27646023 ~ 27646725 (-) True G7012
TU10258 lncRNA downstream 251871 27593721 ~ 27595844 (-) True G7010
TU10493 lncRNA upstream 43723 27891901 ~ 28073544 (-) False LOC122349330
TU10456 lncRNA upstream 76236 27924414 ~ 27971499 (-) True G7127
TU10421 lncRNA upstream 86803 27934981 ~ 27939452 (-) True G7105
TU10523 lncRNA upstream 108647 27956825 ~ 27957999 (-) True G7156
TU10453 lncRNA upstream 112396 27960574 ~ 28001479 (-) False G7125
XM_043250498.1 mRNA downstream 44666 27794470 ~ 27803049 (-) True LOC122352815
XM_043250561.1 mRNA downstream 82709 27759218 ~ 27765006 (-) False LOC122352823
XM_043245253.1 mRNA upstream 39641 27887819 ~ 27890576 (-) True LOC122349272
XM_043245266.1 mRNA upstream 92565 27940743 ~ 27942269 (-) True LOC122349282
XM_043250806.1 mRNA upstream 127102 27975280 ~ 27978821 (-) True LOC122352989
XM_043250423.1 mRNA upstream 130500 27978678 ~ 27986215 (-) True LOC122352779
XM_043250640.1 mRNA upstream 148233 27996411 ~ 27997642 (-) True LOC122352890
XR_006250838.1 other downstream 592648 27241224 ~ 27255067 (-) False LOC122343833
TU10183 other downstream 645148 27197905 ~ 27202567 (-) False LOC122344379
TU10045 other downstream 1044790 26801910 ~ 26802925 (-) True c1h19orf53
TU10046 other downstream 1044790 26802170 ~ 26802925 (-) False c1h19orf53
TU9834 other downstream 1429836 26416883 ~ 26417879 (-) False smdt1b
TU10496 other upstream 226470 28074648 ~ 28076444 (-) False LOC122349330
TU11020 other upstream 395950 28244128 ~ 28248523 (-) True G7475
TU11081 other upstream 542861 28391039 ~ 28392053 (-) True G7508
TU11094 other upstream 558004 28406182 ~ 28446591 (-) True G7515
TU11106 other upstream 675527 28523705 ~ 28525551 (-) True G7527

Expression Profile