RNA id: TU10496



Basic Information


Item Value
RNA id TU10496
length 762
RNA type TUCP
GC content 0.43
exon number 4
gene id LOC122349330
representative False

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 27891901 ~ 28076645 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


taaaacagcagaaaaacagTTGCAGCTTGCATTTGCAGCTCACTCTGCTGAAATCTATTGGCTAACACTACAACACGTGATGTCATTGATCATGGTTCCTCCTCTTTCCCTGGTGTTTCTGCTCATAATTCCAGaaGTTTATGGGCTGGAGAGTTGGTCTGTGAGATACAGTTCTTCACACATCTGTGCTCTAAAACACTCATCAGTGATAATGAGATGCACTTATACATACCCTCCTGAACATCAGATCAAGAAAGTGTTCtggaccaaaacaaaaaacaaaaatcctgaTGAAGAGTTTCCAGATCTGTCTGAGGACCCTGAATACAGTCAGAGGTTTCAGTATCtgggagataaagagaagaGCTGCACCATGAGACTgagtcatgtgacacagaaagaTGAACACGAGTACTGTTTCAGATTCACTACTGATGAAGATAAATGGATTGGTCATCCAGGAGTGACTCTTACTGTTTTAGaTCTTCAGGTGGAGTCTcctgagagagtgacagagggAGATTCAGTCCGTCTGACATGTAAAAGCAGCTGCGCTCTGACTGACAGAGCAACATTCATCTGGTACAGAAACTCACAGCCATTAActgagagaagagacagaaacaatataCTCCTGCTGCAGTCAGTCAGAAGAGAGGATGCAGGCAGATATAGCTGTGCTCTACAGGAACACACTTACATCTCTCCTGAGGTTTATCTCAATGTCACGTGTGAGTATGTTCTACAAAGTTTTcttccatt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU10548 lncRNA downstream 342 28073917 ~ 28074306 (-) False LOC122349330
TU10493 lncRNA downstream 1104 27891901 ~ 28073544 (-) False LOC122349330
TU10488 lncRNA downstream 64401 27843678 ~ 28010247 (-) True G7138
TU10453 lncRNA downstream 73169 27960574 ~ 28001479 (-) False G7125
TU10461 lncRNA downstream 102438 27790801 ~ 27972210 (-) True G7128
TU10557 lncRNA upstream 33238 28109682 ~ 28114927 (-) True G7182
TU10636 lncRNA upstream 145812 28222256 ~ 28223230 (-) False nxnl1
TU10641 lncRNA upstream 162412 28238856 ~ 28239695 (-) True G7238
TU11036 lncRNA upstream 187953 28264397 ~ 28285334 (-) True G7480
TU11054 lncRNA upstream 232460 28308904 ~ 28803891 (-) True G7491
XM_043250471.1 mRNA downstream 12558 28057106 ~ 28062090 (-) True LOC122352802
XM_043245320.1 mRNA downstream 22148 28050085 ~ 28052500 (-) True LOC122349325
XM_043245309.1 mRNA downstream 27737 28045169 ~ 28046911 (-) True LOC122349314
XM_043250829.1 mRNA downstream 29475 28043818 ~ 28045173 (-) True LOC122353000
XM_043250448.1 mRNA downstream 40330 28028150 ~ 28034318 (-) True LOC122352793
XM_043242481.1 mRNA upstream 110279 28186723 ~ 28187938 (-) True LOC122347290
XM_043242487.1 mRNA upstream 115262 28191706 ~ 28192763 (-) True LOC122347302
XM_043246520.1 mRNA upstream 141838 28218282 ~ 28220347 (-) True LOC122350202
XM_043249779.1 mRNA upstream 144455 28220899 ~ 28223247 (-) True nxnl1
XM_043245377.1 mRNA upstream 195125 28271569 ~ 28273549 (-) True LOC122349362
TU10417 other downstream 135196 27754782 ~ 27939452 (-) False G7105
TU10420 other downstream 135196 27754782 ~ 27939452 (-) False G7105
XR_006250838.1 other downstream 819581 27241224 ~ 27255067 (-) False LOC122343833
TU10183 other downstream 872081 27197905 ~ 27202567 (-) False LOC122344379
TU10045 other downstream 1271723 26801910 ~ 26802925 (-) True c1h19orf53
TU11020 other upstream 167684 28244128 ~ 28248523 (-) True G7475
TU11081 other upstream 314595 28391039 ~ 28392053 (-) True G7508
TU11094 other upstream 329738 28406182 ~ 28446591 (-) True G7515
TU11106 other upstream 447261 28523705 ~ 28525551 (-) True G7527
TU11178 other upstream 973299 29049743 ~ 29128775 (-) False G7563

Expression Profile