RNA id: TU10523



Basic Information


Item Value
RNA id TU10523
length 1099
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G7156
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 27956825 ~ 27957999 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CttcagtattaataaataaataaatataaataaataataataataatcatatttattaattatttattaatcacttGCAATTATTTAGTAGCCctttcagtattttaaataatcataatacatatcctcattaattatttattgtaattattctgctattaatttatttttctctacAGTGttgactaattaaaaataatgcttaatATGATCAGTATTTACGTATTTTAGGCCCCTTCagcattattttcattcattattttcattcacGCATTTTAAGTCCCTTCagtatgttatttaatataatatttaagtcTGGTAAGAACGAGATACGAATGAAACACTGCACCAATAAACCGTATTAAACCGTGTTGATGTCCAGTGCTCATCTGGAAGCATCCGTCACTTTCAGACTCACTCCAGCACTGAATGAGTAGCTGCGTGTTCATGATAGCGGTAAACCAGCAGACAGTCATCCAGCCGGATCACGTGACCTCCTCGACGAAGACTCTGGTAGAAGAAGAGCAGATCCTCAGGAACGCCCTGCCAGAGGAGCAGATGAGGTGAGCGGCGCTCAGGAGACAGACGTCTGCTCGAGCGTCAGAAGAGCCTCACCTTCCCTCCCTCGTCGAACACACCCACCTCCTCAAACCAATCACGAGAGCAGAACCAGGTGGGCATGACGACCGTCGGCCCGTGGGACGTGAACACCTGCCGTATGACACACAGGAAATACATCGACTCGTCATCGACTCTTCATCAGCGACGCCTGAAAATAATGAAACGCATCATCACGCTTACACAAAGAATATGGGGAAGCGCAACTGTTTTCAGAGTTGATCGAAATCATCTTATCAGAGCGATTCCTGAAGGaccacgtgacactgaagactggagaatgATGCTGAGATTCAGCTGCAGATCagaaattatttcagttttacgCGAATTACcagaaacaactaaaaatacCCTCAAACTCCAAATCTGAGCTTCCAAAGAAGAGGCTGGAAGATACAGAACTAAAAAGAGATCAAATATTCACAACACTCTCCAATCgagcacacacgcacacacacacacacagacacacacacac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU10421 lncRNA downstream 17373 27934981 ~ 27939452 (-) True G7105
TU10490 lncRNA downstream 108647 27847715 ~ 27848178 (-) True G7139
TU10424 lncRNA downstream 211530 27736578 ~ 27745295 (-) True G7106
TU10425 lncRNA downstream 212868 27736991 ~ 27743957 (-) False G7106
TU10265 lncRNA downstream 308539 27647927 ~ 27648286 (-) True G7014
TU10453 lncRNA upstream 2575 27960574 ~ 28001479 (-) False G7125
TU10524 lncRNA upstream 3916 27961915 ~ 27964634 (-) True G7157
TU10548 lncRNA upstream 115918 28073917 ~ 28074306 (-) False LOC122349330
TU10557 lncRNA upstream 151683 28109682 ~ 28114927 (-) True G7182
TU10636 lncRNA upstream 264257 28222256 ~ 28223230 (-) False nxnl1
XM_043245266.1 mRNA downstream 14556 27940743 ~ 27942269 (-) True LOC122349282
XM_043245253.1 mRNA downstream 66249 27887819 ~ 27890576 (-) True LOC122349272
XM_043250498.1 mRNA downstream 153776 27794470 ~ 27803049 (-) True LOC122352815
XM_043250545.1 mRNA downstream 191819 27759218 ~ 27765006 (-) False LOC122352823
XM_043250806.1 mRNA upstream 17281 27975280 ~ 27978821 (-) True LOC122352989
XM_043250423.1 mRNA upstream 20679 27978678 ~ 27986215 (-) True LOC122352779
XM_043250640.1 mRNA upstream 38412 27996411 ~ 27997642 (-) True LOC122352890
XM_043245297.1 mRNA upstream 41355 27999354 ~ 28026817 (-) True LOC122349305
XM_043250448.1 mRNA upstream 70151 28028150 ~ 28034318 (-) True LOC122352793
TU10417 other downstream 17373 27754782 ~ 27939452 (-) False G7105
TU10420 other downstream 17373 27754782 ~ 27939452 (-) False G7105
XR_006250838.1 other downstream 701758 27241224 ~ 27255067 (-) False LOC122343833
TU10183 other downstream 754258 27197905 ~ 27202567 (-) False LOC122344379
TU10045 other downstream 1153900 26801910 ~ 26802925 (-) True c1h19orf53
TU10496 other upstream 116649 28074648 ~ 28076444 (-) False LOC122349330
TU11020 other upstream 286129 28244128 ~ 28248523 (-) True G7475
TU11081 other upstream 433040 28391039 ~ 28392053 (-) True G7508
TU11094 other upstream 448183 28406182 ~ 28446591 (-) True G7515
TU11106 other upstream 565706 28523705 ~ 28525551 (-) True G7527

Expression Profile